Factsheet for VIT_13s0156g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018565_P002	Maize	cytosol	27.08	81.08
Zm00001d014865_P001	Maize	cytosol	25.44	80.49
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	81.09	80.35
Os03t0128100-01	Rice	cytosol, plasma membrane	25.44	79.07
AT1G05570.1	Thale cress	cytosol, mitochondrion, plasma membrane	78.93	78.77
AT2G31960.3	Thale cress	cytosol	78.62	78.46
CDY42084	Canola	cytosol, nucleus, plasma membrane	77.39	78.44
CDY12242	Canola	mitochondrion	77.65	78.05
Bra005624.1-P	Field mustard	cytosol, nucleus, plasma membrane	78.01	77.65
Bra015436.1-P	Field mustard	mitochondrion	77.29	77.61
Os02t0832500-01	Rice	plasma membrane	12.38	77.49
KRH43561	Soybean	mitochondrion	77.49	77.45
KRH13867	Soybean	mitochondrion	77.34	77.26
CDY10125	Canola	mitochondrion	76.93	77.09
Os06t0728800-01	Rice	plasma membrane	10.89	76.81
CDY47273	Canola	plasma membrane	66.08	76.09
Zm00001d027475_P001	Maize	mitochondrion, plastid	11.97	75.4
Os03t0128200-01	Rice	mitochondrion	20.61	74.4
OQU86033	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	74.31	74.08
EER90434	Sorghum	plastid	73.84	73.13
TraesCS6D01G405600.1	Wheat	plastid	73.95	73.08
Zm00001d036351_P098	Maize	plastid	73.59	72.95
TraesCS6B01G468200.1	Wheat	golgi, unclear	73.84	72.91
Zm00001d018560_P002	Maize	plastid	22.61	72.73
TraesCS6A01G420100.1	Wheat	plastid	73.64	72.56
TraesCS7B01G480300.1	Wheat	plastid	73.12	72.53
TraesCS7D01G554900.1	Wheat	plastid	73.23	72.48
TraesCS7A01G555700.1	Wheat	plastid	72.92	72.4
Zm00001d027472_P002	Maize	mitochondrion	72.25	72.25
OQU93328	Sorghum	mitochondrion	72.4	72.11
Os02t0832400-02	Rice	nucleus, peroxisome, plasma membrane, plastid	34.53	71.41
Os06t0728902-01	Rice	plastid	7.04	71.35
TraesCS4B01G321300.2	Wheat	mitochondrion	70.66	70.66
TraesCS5A01G490800.2	Wheat	mitochondrion	70.66	70.66
TraesCS4D01G317900.5	Wheat	mitochondrion	70.71	70.46
Zm00001d014866_P002	Maize	cytosol, extracellular	6.27	70.11
Zm00001d014867_P001	Maize	plastid	38.23	67.64
Zm00001d018562_P003	Maize	golgi	19.84	65.42
AT5G36870.1	Thale cress	cytosol, mitochondrion, plasma membrane	62.23	64.72
VIT_04s0044g01280.t01	Wine grape	plastid	61.36	61.87
CDX72782	Canola	cytosol	3.13	59.22
VIT_12s0028g00400.t01	Wine grape	plasma membrane	50.92	57.25
VIT_19s0138g00120.t01	Wine grape	mitochondrion, plasma membrane	51.03	56.48
VIT_15s0024g01490.t01	Wine grape	cytosol, peroxisome, plastid	10.79	54.4
VIT_12s0028g03720.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	35.56	49.82
VIT_17s0000g10010.t01	Wine grape	cytosol	40.24	47.71
VIT_00s0265g00050.t01	Wine grape	cytosol	39.11	46.35
VIT_06s0004g01200.t01	Wine grape	cytosol	41.01	43.56
VIT_19s0138g00110.t01	Wine grape	nucleus	3.13	42.96
VIT_17s0000g10020.t01	Wine grape	cytosol	4.01	26.99
HORVU5Hr1G029220.1	Barley	cytosol	0.82	26.23

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:1.25.40.270	EntrezGene:100256340	wikigene:100256340	MapMan:21.7.1	EMBL:AM448889
InterPro:CALS	ProteinID:CAN82923	ProteinID:CAN82923.1	ProteinID:CCB56686	ProteinID:CCB56686.1	ncoils:Coil
UniProt:F6HPT0	InterPro:FKS1-like_dom1	EMBL:FN596003	GO:GO:0000148	GO:GO:0003674	GO:GO:0003824
GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	InterPro:Glyco_trans_48	InterPro:IPR023175	EntrezGene:LOC100256340	wikigene:LOC100256340	PFAM:PF02364
PFAM:PF04652	PFAM:PF14288	PANTHER:PTHR12741	PANTHER:PTHR12741:SF21	SMART:SM01205	TIGR:TC57054
TMHMM:TMhelix	UniParc:UPI0002108010	ArrayExpress:VIT_13s0156g00210	EnsemblPlantsGene:VIT_13s0156g00210	EnsemblPlants:VIT_13s0156g00210.t01	InterPro:VPS_Vta1/CALS_N
unigene:Vvi.9184	RefSeq:XP_002271648	RefSeq:XP_002271648.2	RefSeq:XP_010659550.1	SEG:seg	:

Description

No Description!

Coordinates

chr13:+:23971256..23998780

Molecular Weight (calculated)

224860.0 Da

IEP (calculated)

9.531

GRAVY (calculated)

-0.126

Length

1946 amino acids

Sequence
(BLAST)

0001: MAYRRGSEQQ PPRRIMRTQT AGNLGEAMMD SEVVPSSLVE IAPILRVANE VESSNPRVAY LCRFYAFEKA HRLDPTSSGR GVRQFKTALL QRLERENEIT
0101: LAGRAKSDAR EMQSFYQHYY KKYIQALQKA ADKADRAQLT KAYQTAAVLF EVLKAVNLTE SVEVADEILQ AHTEVKEKTE LYAPYNILPL DPDSANQAIM
0201: RFPEIKVSVA ALRNTRGLPW PKGYKRKADE DILDWLQAMF GFQKDNVANQ REHLILLLAN GHIRQFPKPD QQPKLDDRAV TEVMKKLFKN YKKWCNYLGR
0301: KSSLWLPTIQ QDVQQRKLLY MGLYLLIWGE AANLRFMPEC LCYIYHHMAF EVYGSLSGSV SPMTGENVKP TYGGEEEAFL KKVVTPIYET IAKEAERSKG
0401: GKSKHSQWRN YDDLNEYFWS MDCFRLGWPM RADADFFRLP PKQFNSSEDE EKKPAARRWM GKINFVEIRS FCHIFRSFYR MWSFYILSLQ AMIIISWNGS
0501: GKLSSILDGE VFKKVMSIFI TAAILKLTQA ILDVILSWKA RKSMPFYVKL RYLLKVVSAA AWVIILPVTY AYSWKNPPGF AQTIRKWFGN SPTSSSLFIL
0601: FVFIYLSPNM LSALLFLFPF IRRYLERSDY KIVMLMMWWS QPRLYVGRGM HESTLSLFKY TMFWVLLMMS KLAFSYFVEI KPLVGPTKAI MDVHITKYQW
0701: HEFFPQAKKN VGVVASLWAP VVLVYFMDTQ IWYAIFSTIF GGLYGAFRRL GEIRTLELLR SRFRSLPGAF NFRLIPVEEN EKTKNRGLLA TLSRKFDEIP
0801: SDKSNPAAKF AQLWNKIISS FREEDLINDS EMSLLLLPYW DDPDLDLIQW PPFLLASKIP IAVDMAKDIN GKESKVSELK KRLQQDEYMQ CAVRECYASF
0901: KNIINFLVQG EREMLVINDI FNKVDDHINK DNLMELNMGA LPDLHELFVN LIVFLKDNNK EDKDKVVILL LDMLEVVTRD IMDDPIPSLL DSTHGGSYGK
1001: HEGMMPLDQQ HQFFGELNFP VPDSEAWKEK IRRLNLLLTV KESAMDVPSN IDAKRRISFF SNSLFMDMPP APKVRNMLSF SVLTPYYKEE VLFSLKSLEE
1101: PNEDGVSIIF YLQKIFPDEW KNFLERVDRN SEEDLRGHED LEEKLRLWAS YRGQTLTRTV RGMMYYRKAL ELQTFLDMAQ VEDLKKGYKA AELNSEEHSK
1201: SERSLWSQCQ AVADMKFTYV VSCQQYGIDK RAGDPRAKDI LRLMTTYPSL RVAYVDEVEK TSKDKSKKTE EKVYYSALAK AALPKSIDSS DPVQNLDQDI
1301: YRIKLPGPAI LGEGKPENQN HAIIFTRGEC LQTIDMNQDN YMEEAFKMRN LLQEFLKKHD GVRNPTILGL REHIFTGSVS SLAWFMSNQE NSFVTIGQRL
1401: LANPLRVRFH YGHPDVFDRL FHLTRGGVSK ASKVINLSED IFAGINSTLR EGSVTHHEYI QVGKGRDVGL NQISMFEAKI ANGNGEQTLS RDIYRLGHRF
1501: DFFRMMSCYF TTIGFYFSTL LTVLTVYVFL YGRLYLVLSG LEKELSNKPA IRDNKALQVA LASQSFVQIG FLMALPMIVE IGLEKGFRKA LTDFIIMQLQ
1601: LAPVFFTFSL GTKTHYYGRT LLHGGAEYRG TGRGFVVFHA RFAENYRLYS RSHFVKGMEL MILLLVYHIF GSSYKGTVAY ILITISMWLM VGTWLFAPFL
1701: FNPSGFEWQK IVDDWTDWNK WISNRGGIGV SAEKSWESWW EKEQEHLHHS GKRGIIAEIL LALRFFIYQY GLVYHLSITK SKSFLVYGIS WVVIFGILFV
1801: MKALSVGRRR FSADFQLVFR LIKGLIFLTF FAVLIILIVV PHMTFGDILV CFLAILPTGW GLLLIAQACK PLVVRAGIWK SVRTLARSYE LFMGLILFIP
1901: VAFLAWFPFV SEFQTRMLFN QAFSRGLQIS RILGGQRKDN SSNNKD

Best Arabidopsis Sequence Match ( AT1G05570.3 )
(BLAST)

0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS1Callose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AUE0]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.