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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • nucleus 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, unclear
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:cytosol
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G405600.1 Wheat plastid 99.09 99.19
TraesCS6A01G420100.1 Wheat plastid 98.33 98.13
HORVU6Hr1G095090.22 Barley plastid 97.46 97.86
Zm00001d018565_P002 Maize cytosol 30.95 93.85
Os02t0832500-01 Rice plasma membrane 14.46 91.64
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 88.48 89.34
Os02t0832400-02 Rice nucleus, peroxisome, plasma membrane, plastid 42.06 88.1
Zm00001d018562_P003 Maize golgi 25.01 83.56
TraesCS7B01G480300.1 Wheat plastid 82.9 83.28
Zm00001d018560_P002 Maize plastid 25.22 82.15
PGSC0003DMT400074555 Potato plasma membrane 18.26 78.43
VIT_06s0004g01270.t01 Wine grape cytosol, mitochondrion, nucleus, plasma membrane 76.36 76.63
AT5G13000.1 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 75.34 75.96
Bra023386.1-P Field mustard cytosol, mitochondrion, nucleus, plasma membrane 75.19 75.88
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 75.14 75.83
PGSC0003DMT400082011 Potato mitochondrion 74.94 75.82
CDX91152 Canola cytosol, mitochondrion, nucleus, plasma membrane 75.09 75.74
Solyc01g006370.2.1 Tomato nucleus 74.84 75.72
CDX69678 Canola cytosol 75.04 75.61
CDX97217 Canola cytosol 74.99 75.56
KRH46871 Soybean mitochondrion 75.04 75.54
KRH01816 Soybean cytosol 74.73 75.23
Bra008864.1-P Field mustard cytosol, plastid 73.01 74.56
Solyc01g073750.2.1 Tomato nucleus 67.99 74.53
VIT_13s0156g00210.t01 Wine grape mitochondrion 72.91 73.84
CDY42084 Canola cytosol, nucleus, plasma membrane 71.33 73.23
AT1G05570.1 Thale cress cytosol, mitochondrion, plasma membrane 72.2 72.97
AT2G31960.3 Thale cress cytosol 71.99 72.77
CDY12242 Canola mitochondrion 71.44 72.73
KRH43561 Soybean mitochondrion 71.54 72.42
Bra005624.1-P Field mustard cytosol, nucleus, plasma membrane 71.74 72.33
KRH13867 Soybean mitochondrion 71.39 72.23
Bra015436.1-P Field mustard mitochondrion 70.93 72.14
TraesCS4B01G321300.2 Wheat mitochondrion 70.98 71.89
CDY10125 Canola mitochondrion 70.78 71.83
CDY47273 Canola plasma membrane 61.14 71.3
TraesCS6B01G468500.1 Wheat cytosol 16.18 68.6
CDY67378 Canola cytosol 15.53 65.38
Bra005620.1-P Field mustard cytosol 15.27 64.18
CDY42080 Canola cytosol 15.22 63.97
CDY12248 Canola cytosol 4.82 63.76
KRG93040 Soybean plasma membrane 26.23 63.59
AT5G36870.1 Thale cress cytosol, mitochondrion, plasma membrane 58.24 61.36
TraesCS6B01G468600.1 Wheat cytosol 9.44 60.78
TraesCS7B01G048700.1 Wheat plastid 60.02 60.7
CDX72782 Canola cytosol 3.15 60.19
TraesCS3B01G229700.1 Wheat cytosol, plastid 54.19 55.6
TraesCS6B01G001900.1 Wheat cytosol 46.32 52.96
TraesCS3B01G230100.1 Wheat mitochondrion 49.97 51.92
TraesCS6B01G182300.1 Wheat cytosol 51.04 51.38
TraesCS6B01G002100.1 Wheat cytosol 43.13 48.68
TraesCS3B01G327500.1 Wheat mitochondrion 40.84 44.92
TraesCS3B01G274100.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.3 44.68
TraesCS2B01G521100.1 Wheat unclear 39.93 44.46
TraesCS4B01G351900.1 Wheat cytosol 42.87 44.31
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1ncoils:CoilInterPro:FKS1-like_dom1GO:GO:0000148
GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_48InterPro:IPR023175PFAM:PF02364PFAM:PF04652
PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF17SMART:SM01205TMHMM:TMhelixEnsemblPlantsGene:TraesCS6B01G468200
EnsemblPlants:TraesCS6B01G468200.1InterPro:VPS_Vta1/CALS_NSEG:seg:::
Description
No Description!
Coordinates
chr6B:-:717861886..717874594
Molecular Weight (calculated)
226687.0 Da
IEP (calculated)
9.409
GRAVY (calculated)
-0.121
Length
1971 amino acids
Sequence
(BLAST)
0001: MASSSGRRPG AGPGGGEHSS SGAAATPASG GRRILRTQTA GNLGESIFDS EVVPSSLVEI APILRVANEV EASNPRVAYL CRFYAFEKAH RLDPTSSGRG
0101: VRQFKTALLQ RLERENDPTL KGRVKQSDAR EMQSFYQHYY KKYIQALQNA ADKADRAQLT KAYQTAAVLF EVLKAVNVSQ KIEVDQAILE THNQVEEKKK
0201: LYLPYNILPL DPDSAANQAI MRYPEIQASF HALRNTRGLP WPKDHEKKDD ADLLEWLQAL FGFQKDNVSN QREHLILLLA NVHIREMSKP DQQSKLDDHA
0301: LDIVMKKLFK NYKRWCKYLG RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGN VSPTTGENVK PAYGGAEEAF
0401: LKKVVTPIYK IIEMEADRSK TMKSKHSHWR NYDDLNEYFW SRDCFRLGWP MRADADFFKT PHFVLNTRDQ TNGEHRPAGN DHWMGKVNFV EIRSFWHIFR
0501: SFDRMWSFLI LSLQAMVIVA WNGGTPGDIF DAGVFKQVLS IFITAAVMKM GQAILDIVLS WKARRSMSLA VKLRYILKLL SGAAWVVILP VTYAYTSDNP
0601: TGLNRTIKSW FGDGRNQPSL YILAVVVYLS PNMLAATLFI FPVLRRFLEK SNLKVVALIM WWSQPRLFVG RGMHEGAFSL FKYTMFWVIL LATKLVVSFY
0701: VEIRPLVQPT KDIMKVPITT FQWHEFFPHA KNNIGVVIAL WAPIILVYFM DTQIWYAIFS TLVGGIYGAC RRLGEIRTLG MLRSRFESLP KAFNDHLIPN
0801: DSKRRGFRSA FSSKPYKKPE DGKEEDKIAA RFAQIWNLII TSFRQEDLID NREKDLLLVP YCKDREMDMI QWPPFLLASK IPIALDMAAD SGGKDRDLKK
0901: RMDSDPYFTY AIKECYASFK NVIYAVVVGP RERDVIQKIF KVVDDLVAAD TLIKDLHMSN LPTLSKKFIE LLVILQKNNK EDLGQVIILF QDMLEVVTRD
1001: IMEDQLTELL EPVHGGNNRK HEGITPLDQQ EQEQLFTKAV EFEFPVKASD AWKEKIKRLH LLLTVKESAM DVPTNLDARR RISFFANSLF MDMPKAPKVR
1101: NMLPFSVLTP YYKEDVLFSS QALEEENEDG VSILFYLQKI YPDEWKNFLE RVDCKNEEEL RETEQTEDEL RLWASYRGQT LTRTVRGMMY YRQALVLQSC
1201: LDMAPENDLM EGFRAADILS EESHLLTQSK AVADMKFTYV VSCQSYGIQK RSGDPRAQDI LRLMTTYPSL RVAYIDEVEE TSKEGEASKD RSKKIEKVYY
1301: SALVKAAVTK PDDPGQKLDQ DIYRIKLPGN AMLGEGKPEN QNHAIIFTRG EGLQTIDMNQ EHYMEETLKM RNLLQEFTKK HDGVRYPTIL GVREHIFTGS
1401: VSSLAWFMSN QETSFVTIGQ RVLANPLRVR FHYGHPDIFD RLFHLTRGGV SKASKIINLS EDIFAGFNST LREGNVTHHE YMQVGKGRDV GLNQISLFEA
1501: KIAYGNGEQT LSRDIYRLGH RFDFFRMLSC YYTTIGFYFS TMITVWTVYV FLYGRLYLVL SGLDEGLATG RRFIHNDPLQ VALASQSFVQ LGFLMALPMM
1601: MEIGLERGFR TALSDFVLMQ LQLASVFFTF SLGTKTHYYG KTLLHGGAEY RATGRGFVVF HAKFAENYRL YSRSHFVKGI ELMILLIVFE IFGQSYRGAI
1701: AYIFITFSMW FMVVTWLFAP FLFNPSGFEW QKIVDDWTDW NKWISNRGGI GVSPDKSWES WWEKEHEPLK YSGKRGTVLE IVLAVRFFIY QYGLVYHLNI
1801: TKHTKSVLVY CLSWVVIFFI LLVMKAVSVG RRKFSAEFQL VFRLLKGLIF IVFISTIVIL IVIPHMTIQD IFVCILAFMP TGWGLLLVAQ ALKPAIMSVG
1901: LWGSIRALAR GYEIIMGLLL FTPIAFLAWF PFVSEFQTRM LFNQAFSRGL QISRILGGHK KDRAARSKDD R
Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE
Arabidopsis Description
CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.