Factsheet for Zm00001d018560_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027475_P001	Maize	mitochondrion, plastid	38.02	74.43
CDY67378	Canola	cytosol	49.59	64.1
Bra005620.1-P	Field mustard	cytosol	48.76	62.9
CDY42080	Canola	cytosol	48.59	62.69
CDY12248	Canola	cytosol	15.21	61.74
CDX72782	Canola	cytosol	10.08	59.22
Zm00001d035842_P001	Maize	cytosol	53.88	57.5
Os02t0832400-02	Rice	nucleus, peroxisome, plasma membrane, plastid	81.49	52.39
Zm00001d014867_P001	Maize	plastid	75.37	41.45
KRG93040	Soybean	plasma membrane	54.71	40.71
Zm00001d028611_P001	Maize	plastid	18.02	36.82
Zm00001d027474_P001	Maize	cytosol, peroxisome, plasma membrane	30.25	34.46
Zm00001d041460_P001	Maize	mitochondrion, plasma membrane	20.17	28.24
OQU86033	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	86.45	26.79
TraesCS6D01G405600.1	Wheat	plastid	82.31	25.29
TraesCS6B01G468200.1	Wheat	golgi, unclear	82.15	25.22
HORVU6Hr1G095090.22	Barley	plastid	81.49	25.11
TraesCS6A01G420100.1	Wheat	plastid	81.98	25.11
Zm00001d036351_P098	Maize	plastid	80.0	24.66
Solyc01g073750.2.1	Tomato	nucleus	70.91	23.86
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	76.2	23.47
CDX97217	Canola	cytosol	74.55	23.06
CDX69678	Canola	cytosol	74.55	23.06
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	74.38	23.02
Bra023386.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	74.05	22.94
KRH01816	Soybean	cytosol	74.21	22.93
KRH46871	Soybean	mitochondrion	74.21	22.93
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	73.88	22.89
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	73.55	22.77
CDY42084	Canola	cytosol, nucleus, plasma membrane	72.23	22.76
VIT_13s0156g00210.t01	Wine grape	mitochondrion	72.73	22.61
PGSC0003DMT400082011	Potato	mitochondrion	72.73	22.59
Solyc01g006370.2.1	Tomato	nucleus	72.73	22.59
CDY12242	Canola	mitochondrion	72.07	22.52
AT2G31960.3	Thale cress	cytosol	72.56	22.51
AT1G05570.1	Thale cress	cytosol, mitochondrion, plasma membrane	72.23	22.41
Bra005624.1-P	Field mustard	cytosol, nucleus, plasma membrane	72.23	22.35
KRH43561	Soybean	mitochondrion	71.9	22.34
KRH13867	Soybean	mitochondrion	71.9	22.33
Zm00001d027472_P002	Maize	mitochondrion	69.75	21.69
Bra015436.1-P	Field mustard	mitochondrion	69.42	21.67
CDY10125	Canola	mitochondrion	69.26	21.58
Bra008864.1-P	Field mustard	cytosol, plastid	68.1	21.35
Zm00001d030559_P001	Maize	mitochondrion	23.31	19.0
AT5G36870.1	Thale cress	cytosol, mitochondrion, plasma membrane	51.9	16.78
Zm00001d016156_P003	Maize	cytosol, peroxisome, plasma membrane	20.0	16.58
CDY47273	Canola	plasma membrane	41.32	14.79
Zm00001d045037_P001	Maize	cytosol	2.81	14.66
Zm00001d044584_P006	Maize	plastid	45.29	14.21
Zm00001d044566_P006	Maize	cytosol	40.17	12.78
Zm00001d030266_P001	Maize	cytosol	34.21	10.79
Zm00001d027392_P003	Maize	cytosol	33.88	10.69
Zm00001d043909_P002	Maize	cytosol	31.24	10.62
Zm00001d043428_P005	Maize	cytosol, plastid	29.75	9.89
Zm00001d047143_P001	Maize	cytosol	3.97	5.63
Zm00001d016155_P001	Maize	plastid	5.45	3.01
Zm00001d035841_P002	Maize	cytosol, golgi, plasma membrane, plastid	6.61	2.97
Os02t0832500-01	Rice	plasma membrane	1.49	2.89
Zm00001d014865_P001	Maize	cytosol	2.81	2.76
Zm00001d018565_P002	Maize	cytosol	2.81	2.62
PGSC0003DMT400074555	Potato	plasma membrane	1.65	2.18
Zm00001d018562_P003	Maize	golgi	1.16	1.19
Zm00001d050344_P001	Maize	cytosol	0.33	0.8
Zm00001d024113_P001	Maize	cytosol	0.17	0.74
Zm00001d014866_P002	Maize	cytosol, extracellular	0.0	0.0
Zm00001d045776_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d018560_P002	EnsemblPlants:Zm00001d018560_T002	EnsemblPlantsGene:Zm00001d018560	Gene3D:1.25.40.270	InterPro:FKS1-like_dom1	InterPro:IPR023175
InterPro:VPS_Vta1/CALS_N	KEGG:00500+2.4.1.34	PANTHER:PTHR12741	PANTHER:PTHR12741:SF17	PFAM:PF04652	PFAM:PF14288
ProteinID:AQK76461.1	SEG:seg	SMART:SM01205	UniParc:UPI0008454BCB	UniProt:A0A1D6HQB0	MapMan:35.1

Description

Callose synthase 3

Coordinates

chr5:+:223226269..223236491

Molecular Weight (calculated)

69363.4 Da

IEP (calculated)

9.794

GRAVY (calculated)

-0.416

Length

605 amino acids

Sequence
(BLAST)

001: MASSSGGGGG RRMTPGGDSS ASAGGRRIYR TQTAGNLGDS IFDSEVVPSS LVDIAPILRV ANEVEASNPR VAYLCRFYAF EKAHRLDPTS SGRGVRQFKT
101: ALLQRLEREN DPTLKGRVKQ SDAREMQSFY QLYYKKYIQA LQKVADKADR AQLTKAYQTA AVLFEVLRAV NVSQKIEVDK SILETHNQVE EKKKLYLPYN
201: ILPLDPDSAN QPIMLYPEIQ AAFHALRNTR GLPWPKEHEK KRDAPKEHEK KRDADLLAWL QAMFGFQKDN VSNQREHLIL LLANVHIRQI PKSDQQPKLD
301: DRALDTVMKK LFKNYKRWCK YLGRKSSLWL PTIQQEVQQR KLLYMGLYLL IWGEAANLRF MPECLCYIYH HMAFELYGML AGNVSPTTGE NVKPAYGGEE
401: EAFLKRVVTP IYKVIEKEVE RSKTMKSKHS HWRNYDDLNE YFWSRDCFRL GWPMRSDADF FKTPNVPLHH VDGEDRTVGN GNWMGKVNFV EIRSFWHIFR
501: SFDRMWSFLI LSLQAMVIIA WNGGTPSDIF DRGVFKQVLS IFITAAILKL GQGPPLHTDV FGGFYLTCPN HLNRYWTSFS SIGATSILSR QYSTPYNIAG
601: LSAVL

Best Arabidopsis Sequence Match ( AT2G31960.1 )
(BLAST)

0001: MAQRKGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS2Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.