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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, nucleus, plasma membrane

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • extracellular 1
  • plastid 2
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0728902-01 Rice plastid 17.32 84.9
Zm00001d018560_P002 Maize plastid 52.39 81.49
Os03t0128200-01 Rice mitochondrion 43.68 76.25
CDY67378 Canola cytosol 32.31 64.96
Bra005620.1-P Field mustard cytosol 31.77 63.75
CDY42080 Canola cytosol 31.67 63.54
CDY12248 Canola cytosol 9.88 62.42
CDX72782 Canola cytosol 6.48 59.22
Zm00001d018562_P003 Maize golgi 31.24 49.83
Os01t0533100-00 Rice mitochondrion, plastid 22.1 44.83
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 90.65 43.7
HORVU6Hr1G095090.22 Barley plastid 88.1 42.23
TraesCS6D01G405600.1 Wheat plastid 88.2 42.15
TraesCS6B01G468200.1 Wheat golgi, unclear 88.1 42.06
TraesCS6A01G420100.1 Wheat plastid 87.35 41.62
KRG93040 Soybean plasma membrane 35.6 41.21
Os02t0247000-01 Rice plasma membrane 12.65 40.48
Solyc01g073750.2.1 Tomato nucleus 71.73 37.54
VIT_06s0004g01270.t01 Wine grape cytosol, mitochondrion, nucleus, plasma membrane 76.73 36.76
AT5G13000.1 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 75.56 36.37
Bra023386.1-P Field mustard cytosol, mitochondrion, nucleus, plasma membrane 75.45 36.35
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 75.24 36.25
CDX97217 Canola cytosol 75.35 36.25
CDX69678 Canola cytosol 75.35 36.25
CDX91152 Canola cytosol, mitochondrion, nucleus, plasma membrane 75.24 36.23
KRH46871 Soybean mitochondrion 74.92 36.01
KRH01816 Soybean cytosol 74.71 35.9
Solyc01g006370.2.1 Tomato nucleus 74.28 35.88
PGSC0003DMT400082011 Potato mitochondrion 74.18 35.83
CDY42084 Canola cytosol, nucleus, plasma membrane 72.58 35.57
CDY12242 Canola mitochondrion 72.58 35.28
Bra005624.1-P Field mustard cytosol, nucleus, plasma membrane 72.48 34.88
AT2G31960.3 Thale cress cytosol 71.94 34.72
AT1G05570.1 Thale cress cytosol, mitochondrion, plasma membrane 71.94 34.72
Bra008864.1-P Field mustard cytosol, plastid 71.2 34.72
VIT_13s0156g00210.t01 Wine grape mitochondrion 71.41 34.53
KRH43561 Soybean mitochondrion 70.99 34.31
KRH13867 Soybean mitochondrion 70.99 34.29
Bra015436.1-P Field mustard mitochondrion 70.03 34.0
Os06t0113150-00 Rice mitochondrion 17.43 33.54
CDY10125 Canola mitochondrion 68.86 33.37
CDY47273 Canola plasma membrane 50.05 27.87
AT5G36870.1 Thale cress cytosol, mitochondrion, plasma membrane 53.99 27.15
Os06t0182300-01 Rice plasma membrane 51.75 25.5
Os03t0119500-01 Rice plasma membrane 32.62 16.11
Os01t0754200-03 Rice cytosol, mitochondrion, peroxisome, plasma membrane 30.29 15.92
Os01t0533400-01 Rice plasma membrane 10.52 11.97
BAC19889 Rice endoplasmic reticulum, extracellular, plasma membrane 0.21 0.83
Os01t0533500-01 Rice plasma membrane 0.43 0.71
Zm00001d018565_P002 Maize cytosol 0.0 0.0
Os01t0672500-01 Rice plasma membrane 0.0 0.0
PGSC0003DMT400074555 Potato plasma membrane 0.0 0.0
Os01t0533000-00 Rice cytosol, plasma membrane 0.0 0.0
Os06t0728800-01 Rice plasma membrane 0.0 0.0
Os06t0112800-01 Rice plasma membrane 0.0 0.0
Os03t0128100-01 Rice cytosol, plasma membrane 0.0 0.0
Os02t0832500-01 Rice plasma membrane 0.0 0.0
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:50.2.4UniProt:A0A0P0VRQ2ProteinID:BAS81768.1ncoils:Coil
InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:IPR023175
EnsemblPlantsGene:Os02g0832400EnsemblPlants:Os02t0832400-02PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF17
SMART:SM01205TMHMM:TMhelixUniParc:UPI000393880CInterPro:VPS_Vta1/CALS_NSEG:seg:
Description
Similar to Callose synthase 1 catalytic subunit. (Os02t0832400-01);Similar to Callose synthase 1 catalytic subunit. (Os02t0832400-02)
Coordinates
chr2:+:35790210..35797308
Molecular Weight (calculated)
107882.0 Da
IEP (calculated)
9.925
GRAVY (calculated)
-0.239
Length
941 amino acids
Sequence
(BLAST)
001: MASSSSGRRV GGPRGGGESS PSPAAGAGAA ASGGRRILRT QTAGNLGESI FDSEVVPSSL VEIAPILRVA NEVEGSNPRV AYLCRFYAFE KAHRLDPTSS
101: GRGVRQFKTA LLQRLEREND PTLKGRVKQS DAREMQSFYQ HYYKKYIQAL QNAADKADRA QLTKAYQTAA VLFEVLKAVN VSQKIEVDQA ILETHNQVEE
201: KKKLYLPYNI LPLDPDSANQ AIMRYPEIQA AFHALRNTRG LPWPKDHEKK PDADLLGWLQ AMFGFQKDNV SNQREHLILL LANVHIRQIP KPDQQPKLDD
301: RALDTVMKKL FKNYKRWCKY LGRKSSLWLP TIQQEVQQRK LLYMGLYLLI WGEAANLRFM PECLCYIYHH MAFELYGMLA GNVSPTTGEN VKPAYGGDEE
401: AFLKKVVTPI YKVIEKEAER SESSERSERS KTTKSKHSHW RNYDDLNEYF WSRDCFRLGW PMRADADFFK TPDYAYHDEV SGENRRVGSG QWMGKVNFVE
501: IRSFWHIFRS FDRMWSFLIL SLQAMIIIAW NGGTPSDIFD AGVFKQVLSI FITAAILKLG QAILDIILSW KARRSMSLAG KLRYILKLIS AAAWVVILPV
601: TYAYTWENPT GLARTIKSWL GDGQNQPSLY ILAVVIYLAP NMLSAVLFLF PVLRRALERS NLKVVTFMMW WSQPRLFVGR GMHEGAFSLF KYTMFWVLLL
701: ATKLIVSYYV EIKPLVRPTK DIMKEPIRTF QWHEFFPHGN NNIGIVIALW APIILVYFMD TQIWYAIFST LIGGIYGACR RLGEIRTLGM LRSRFESLPK
801: AFNQRLIPSD SNKRRGIRAA FSSKPTKTPE DSKEEEKIAA RFAQIWNLII TSFREEDLID NREKDLLLVP YCKDRDMDII QWPPFLLASK IPIALDMAAD
901: SEGKDRDLKK RVKSDPYFTY AIKECYASFK NIIYTLVVGA K
Best Arabidopsis Sequence Match ( AT5G13000.2 )
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTG MMYYRKALEL QAFLDMAMHE DLMEGYKAVE
1201: LNSENNSRGE RSLWAQCQAV ADMKFTYVVS CQQYGIHKRS GDPRAQDILR LMTRYPSLRV AYIDEVEEPV KDKSKKGNQK VYYSVLVIYR IRLPGPAILG
1301: EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS FVTIGQRLLA NPLRVRFHYG
1401: HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD IYRLGHRFDF FRMMSCYFTT
1501: VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS EFVLMQLQLA PVFFTFSLGT
1601: KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG TWLFAPFLFN PSGFEWQKIV
1701: DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW LVIFLIFFLL FGLIFMTFIA
1801: IIVILITLAH MTIQDIIVCI LAFMPTGWGM LLIAQACKPV VHRAGFWGSV RTLARGYEIV MGLLLFTPVA FLAWFPFVSE FQTRMLFNQA FSRGLQISRI
1901: LGGHRKDRSS RNKE
Arabidopsis Description
CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.