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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 5
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
plasma membrane: 18260611
plasma membrane: 19502382
plasma membrane: 28056797
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G085510.11 Barley cytosol 88.14 88.24
TraesCS4D01G346600.1 Wheat golgi 88.04 88.13
TraesCS4B01G351900.1 Wheat cytosol 87.93 87.89
TraesCS5A01G520600.3 Wheat cytosol 87.83 87.23
KXG40330 Sorghum cytosol 87.25 87.07
Zm00001d027392_P003 Maize cytosol 86.73 86.23
GSMUA_Achr5P11660_001 Banana cytosol, peroxisome, plasma membrane 64.53 75.41
Solyc01g006350.2.1 Tomato endoplasmic reticulum, nucleus 44.33 75.24
PGSC0003DMT400082009 Potato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.81 74.39
GSMUA_Achr5P11670_001 Banana cytosol 11.07 72.26
KRH36300 Soybean cytosol 71.88 71.88
KRG93041 Soybean mitochondrion 71.72 71.76
CDY05323 Canola golgi, plasma membrane 44.96 71.3
VIT_06s0004g01200.t01 Wine grape cytosol 67.68 70.41
CDY67747 Canola mitochondrion 23.61 69.88
AT3G07160.2 Thale cress cytosol 67.58 68.08
CDY24642 Canola cytosol 67.89 67.78
Bra029628.1-P Field mustard cytosol 67.84 67.59
Os06t0112800-01 Rice plasma membrane 13.54 66.49
CDY08011 Canola cytosol 66.26 66.44
Bra001239.1-P Field mustard mitochondrion 66.32 66.28
Solyc01g006360.2.1 Tomato nucleus 25.81 64.48
CDX74058 Canola mitochondrion 66.05 64.43
CDY34913 Canola cytosol 62.43 62.93
Bra040364.1-P Field mustard cytosol 62.75 62.59
CDY67918 Canola cytosol, nucleus, plasma membrane 30.38 61.01
Os01t0533000-00 Rice cytosol, plasma membrane 20.36 59.97
Os03t0128100-01 Rice cytosol, plasma membrane 19.57 59.58
BAC19889 Rice endoplasmic reticulum, extracellular, plasma membrane 7.03 55.6
Os01t0672500-01 Rice plasma membrane 13.01 52.1
Os06t0113150-00 Rice mitochondrion 12.85 50.1
Os01t0533500-01 Rice plasma membrane 14.69 50.0
Os02t0832500-01 Rice plasma membrane 7.76 47.59
Os06t0728800-01 Rice plasma membrane 6.51 44.93
Os06t0182300-01 Rice plasma membrane 44.54 44.45
Os01t0754200-03 Rice cytosol, mitochondrion, peroxisome, plasma membrane 40.03 42.63
Os01t0533100-00 Rice mitochondrion, plastid 8.6 35.34
Os03t0128200-01 Rice mitochondrion 9.65 34.14
Os02t0832400-02 Rice nucleus, peroxisome, plasma membrane, plastid 16.11 32.62
Os06t0728902-01 Rice plastid 2.73 27.08
Os02t0247000-01 Rice plasma membrane 4.09 26.53
Os01t0533400-01 Rice plasma membrane 9.34 21.52
Protein Annotations
KEGG:00500+2.4.1.34MapMan:21.7.1InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824
GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740InterPro:Glyco_trans_48EnsemblPlantsGene:Os03g0119500EnsemblPlants:Os03t0119500-01PFAM:PF02364PFAM:PF14288
PANTHER:PTHR12741PANTHER:PTHR12741:SF12SMART:SM01205TMHMM:TMhelixUniParc:UPI0007755A66SEG:seg
Description
cannot reach the roof 1Callose synthase, Ovary expansion by affecting vascular cell patterning (Os03t0119500-01)
Coordinates
chr3:+:1049042..1075622
Molecular Weight (calculated)
218060.0 Da
IEP (calculated)
8.560
GRAVY (calculated)
-0.004
Length
1906 amino acids
Sequence
(BLAST)
0001: MARAAANWER LVRAALRGER LAGAFGVPVT GIAGNVPSSL GNNVHIDEVL RAADEIQDED PTVARILCEH AYTLAQNLDP NSEGRGVLQF KTGLMSVIRQ
0101: KLAKREGGAI DRSQDVAKLQ EFYKLYREKH KVDELCEDEM KLRESAVFSG NLGELERKTL KRKKVLATLK VLWSVIEEIT REISPEDAEK LISEEMKRVM
0201: QKDAERTEDV VAYNIIPLDA LSTTNDIVNF PEVRAAISAL QYHRELPRLP ATFSVPDARN SDMLDLLHCV FGFQKDNVTN QREHVVHLLA NEQSRLGKLP
0301: GNEPKIDEGA VHVVFSKSLD NYIKWCNYLP LPPVWNNTES LTKEKKLLYV CLYYLIWGEA ANVRFLPEGL CYIFHHLARE LEEIIRRQTA EPAESCISNG
0401: GVSFLDQVIS PMYEIIAAEA ANNDNGRAPH SAWRNYDDFN EFFWSPKCFQ LGWPWKISNP FFSKPSRKEK GLVGRNHHYG KTSFVEHRTF LHLYHSFHRL
0501: WIFLVMMFQG LMIIAFKDRK FDKKTVLTLL SLGPTYVIMK FIESILDILM MYGAYSTSRR SAITRVLWRF CWFTAASLVI CYLYIKAFQD GTNSATFKIY
0601: VFVIGAYVGA KIIIGLLMSV PCCHGLTDYC YRWSVVRLGK WMHQENNYVG RGMHERPSDY IKYVAFWLAI LGAKFSFTYF LQIEPLVKPT MEIINFKRLE
0701: YAWHDFVSKN NHNALTILSL WAPVVSIYLL DIHVFYTVMS AICGFLLGAR DRLGEIRSVE AVHRFFEKFP EAFMDKLHVA VPKRKQLLSS SQHPELNKFD
0801: ASKFAPFWNE IVRNMREEDY INNTELDLLL MPKNNGSLPI VQWPLFLLAS KVFLAKDIAI DCKDSQEELW LRISKDEYMQ YAVVECYHSI YYILTSILDK
0901: EGRLWVERIY VGIRESISKR NIQSDLHFSR LPNVIAKLVA VAGILKETES ADLRKGAINA IQDLYEVVHH EVLSVDMSGN IDEWEQIKQA RAEGRLFNNL
1001: KWPTDSGLKD LIKRLYSLLT IKESAANVPK NLEARRRLEF FTNSLFMQMP VARPVSEMLS FSVFTPYYSE TVLYSKDELQ KRNEDGISTL FYLQKIYPDE
1101: WKNFLARINR DENTTDSELF SSPNDMMELR LWASYRGQTL ARTVRGMMYY RKALMLQSYL EKLQSEDIES AVATTGLGLA DIHFELSPEA RAQADLKFTY
1201: VVTCQIYGVQ KAERKPEAAD IALLMQRNEA LRVAYVDIVE SVKNGKPSTE YYSKLVKADI HGKDKEIYSI KLPGNFKLGE GKPENQNHAI IFTRGNAVQT
1301: IDMNQDNYFE EALKMRNLLE EFYQNHGKHK PSILGVREHV FTGSVSSLAS FMSNQETSFV TLGQRVLANP LKVRMHYGHP DVFDRIFHIT RGGISKASRV
1401: INISEDIYAG FNSTLRLGNI THHEYIQVGK GRDVGLNQIA LFEGKVAGGN GEQVLSRDIY RLGQLFDFFR MLSFYVTTIG FYFCTMLTVW TVYIFLYGKT
1501: YLALSGVGES IQNRVDILQN TALNAALNTQ FLFQIGVFTA IPMILGFILE FGVLTAFVSF ITMQFQLCSV FFTFSLGTRT HYFGRTILHG GAKYRATGRG
1601: FVVRHIKFAE NYRLYSRSHF VKGLEVALLL VIFLAYGFNN GGAVGYILLS ISSWFMAVSW LFAPYIFNPS GFEWQKVVED FRDWTNWLFY RGGIGVKGEE
1701: SWEAWWDEEL AHIHNVGGRI LETVLSLRFF IFQYGVVYHM DASESSKALL IYWISWAVLG GLFVLLLVFG LNPKAMVHFQ LFLRLIKSIA LLMVLAGLVV
1801: AVVFTSLSVK DVFAAILAFV PTGWGVLSIA VAWKPIVKKL GLWKTVRSLA RLYDAGTGMI IFVPIAIFSW FPFISTFQTR LLFNQAFSRG LEISLILAGN
1901: NPNAGV
Best Arabidopsis Sequence Match ( AT3G07160.1 )
(BLAST)
0001: MSRAESSWER LVNAALRRDR TGGVAGGNQS SIVGYVPSSL SNNRDIDAIL RAADEIQDED PNIARILCEH GYSLAQNLDP NSEGRGVLQF KTGLMSVIKQ
0101: KLAKREVGTI DRSQDILRLQ EFYRLYREKN NVDTLKEEEK QLRESGAFTD ELERKTVKRK RVFATLKVLG SVLEQLAKEI PEELKHVIDS DAAMSEDTIA
0201: YNIIPLDAPV TTNATTTFPE VQAAVAALKY FPGLPKLPPD FPIPATRTAD MLDFLHYIFG FQKDSVSNQR EHIVLLLANE QSRLNIPEET EPKLDDAAVR
0301: KVFLKSLENY IKWCDYLCIQ PAWSNLEAIN GDKKLLFLSL YFLIWGEAAN IRFLPECLCY IFHHMVREMD EILRQQVARP AESCMPVDSR GSDDGVSFLD
0401: HVIAPLYGVV SAEAFNNDNG RAPHSAWRNY DDFNEYFWSL HSFELGWPWR TSSSFFQKPI PRKKLKTGRA KHRGKTSFVE HRTFLHLYHS FHRLWIFLAM
0501: MFQALAIIAF NKDDLTSRKT LLQILSLGPT FVVMKFSESV LEVIMMYGAY STTRRLAVSR IFLRFIWFGL ASVFISFLYV KSLKAPNSDS PIVQLYLIVI
0601: AIYGGVQFFF SILMRIPTCH NIANKCDRWP VIRFFKWMRQ ERHYVGRGMY ERTSDFIKYL LFWLVVLSAK FSFAYFLQIK PLVGPTRMIV KQNNIPYSWH
0701: DFVSRKNYNA LTVASLWAPV VAIYLLDIHI FYTIFSAFLG FLLGARDRLG EIRSLEAIHK LFEEFPGAFM RALHVPLTNR TSDTSHQTVD KKNKVDAAHF
0801: APFWNQIIKS LREEDYITDF EMELLLMPKN SGRLELVQWP LFLLSSKILL AKEIAAESNS QEEILERIER DDYMKYAVEE VYHTLKLVLT ETLEAEGRLW
0901: VERIYEDIQT SLKERNIHHD FQLNKLSLVI TRVTALLGIL KENETPEHAK GAIKALQDLY DVMRLDILTF NMRGHYETWN LLTQAWNEGR LFTKLKWPKD
1001: PELKALVKRL YSLFTIKDSA AHVPRNLEAR RRLQFFTNSL FMDVPPPKSV RKMLSFSVFT PYYSEVVLYS MAELTKRNED GISILFYLQK IYPDEWKNFL
1101: ARIGRDENAL EGDLDNERDI LELRFWASYR GQTLARTVRG MMYYRKALML QSYLERKAGN DATDAEGFEL SPEARAQADL KFTYVVTCQI YGRQKEDQKP
1201: EAVDIALLMQ RNEALRIAYI DVVDSPKEGK SHTEYYSKLV KADISGKDKE IYSIKLPGDP KLGEGKPENQ NHAIVFTRGN AIQTIDMNQD NYFEEALKMR
1301: NLLEEFDRDH GIRPPTILGV REHVFTGSVS SLASFMSNQE TSFVTLGQRV LAKPLKIRMH YGHPDVFDRV FHITRGGISK ASRVINISED IFAGFNTTLR
1401: QGNVTHHEYI QVGKGRDVGL NQIALFEGKV AGGNGEQVLS RDVYRLGQLL DFFRMMSFFF TTVGFYLCTM LTVLTVYIFL YGRAYLALSG VGATIRERAI
1501: LLDDTALSAA LNAQFLFQIG VFTAVPMVLG FILEQGFLQA IVSFITMQFQ LCTVFFTFSL GTRTHYFGRT ILHGGARYQA TGRGFVVKHI KFSENYRLYS
1601: RSHFVKAMEV ILLLVVYLAY GNDEAGAVSY ILLTVSSWFL AVSWLFAPYL FNPAGFEWQK VVEDFKEWTN WLFYRGGIGV KGAESWEAWW EEELSHIRTL
1701: SGRIMETILS LRFFIFQYGI VYKLKLQGSD TSFAVYGWSW VAFAMIIVLF KVFTFSQKIS VNFQLLLRFI QGLSLLMALA GIIVAVVLTP LSVTDIFACV
1801: LAFIPTGWGI LSIACAWKPV LKRMGMWKSI RSLARLYDAL MGMLIFLPVA LCSWFPFVST FQTRMMFNQA FSRGLEISLI LAGDNPNSGL
Arabidopsis Description
ATGSL10Glucan synthase-like 10 [Source:UniProtKB/TrEMBL;Acc:A0A178V7F9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.