Factsheet for AT3G07160.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05323	Canola	golgi, plasma membrane	59.3	93.34
CDY24642	Canola	cytosol	93.29	92.46
Bra029628.1-P	Field mustard	cytosol	93.18	92.16
CDY67918	Canola	cytosol, nucleus, plasma membrane	45.93	91.57
CDY08011	Canola	cytosol	88.0	87.59
Bra001239.1-P	Field mustard	mitochondrion	87.69	87.0
CDX74058	Canola	mitochondrion	87.69	84.9
CDY67747	Canola	mitochondrion	28.7	84.32
CDY34913	Canola	cytosol	82.45	82.5
Bra040364.1-P	Field mustard	cytosol	82.82	82.0
Solyc01g006350.2.1	Tomato	endoplasmic reticulum, nucleus	46.93	79.07
PGSC0003DMT400082009	Potato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.46	78.22
KRH36300	Soybean	cytosol	78.07	77.49
KRG93041	Soybean	mitochondrion	77.33	76.8
VIT_06s0004g01200.t01	Wine grape	cytosol	72.3	74.67
GSMUA_Achr5P11660_001	Banana	cytosol, peroxisome, plasma membrane	60.52	70.2
Solyc01g006360.2.1	Tomato	nucleus	28.01	69.46
Os03t0119500-01	Rice	plasma membrane	68.08	67.58
HORVU4Hr1G085510.11	Barley	cytosol	67.97	67.54
TraesCS4B01G351900.1	Wheat	cytosol	68.02	67.49
TraesCS4D01G346600.1	Wheat	golgi	67.81	67.38
KXG40330	Sorghum	cytosol	67.65	67.02
TraesCS5A01G520600.3	Wheat	cytosol	67.71	66.75
Zm00001d027392_P003	Maize	cytosol	67.49	66.61
GSMUA_Achr5P11670_001	Banana	cytosol	9.83	63.7
AT2G36850.1	Thale cress	mitochondrion	62.16	61.76
AT2G13680.1	Thale cress	cytosol	45.35	44.62
AT1G05570.1	Thale cress	cytosol, mitochondrion, plasma membrane	45.61	44.26
AT4G03550.1	Thale cress	plasma membrane	41.6	44.21
AT2G31960.3	Thale cress	cytosol	45.3	43.95
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	45.35	43.89
AT4G04970.1	Thale cress	cytosol	40.86	43.72
AT3G59100.1	Thale cress	cytosol	43.39	42.74
AT5G36870.1	Thale cress	cytosol, mitochondrion, plasma membrane	41.49	41.96
AT1G06490.1	Thale cress	cytosol	42.76	41.32
AT3G14570.1	Thale cress	cytosol	40.86	39.12
AT3G14780.1	Thale cress	nucleus	2.11	11.53

Protein Annotations

KEGG:00500+2.4.1.34	MapMan:21.7.1	EntrezGene:819903	UniProt:A0A178V7F9	UniProt:A0A1I9LQ43	ProteinID:ANM64701.1
ProteinID:ANM64702.1	ArrayExpress:AT3G07160	EnsemblPlantsGene:AT3G07160	RefSeq:AT3G07160	TAIR:AT3G07160	RefSeq:AT3G07160-TAIR-G
EnsemblPlants:AT3G07160.2	Symbol:ATGSL10	Unigene:At.27504	ncoils:Coil	InterPro:FKS1-like_dom1	GO:GO:0000148
GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0006075	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_48	RefSeq:NP_001326712.1	RefSeq:NP_001326713.1
ProteinID:OAP02127.1	PFAM:PF02364	PFAM:PF14288	PANTHER:PTHR12741	PANTHER:PTHR12741:SF12	SMART:SM01205
TMHMM:TMhelix	UniParc:UPI0007E1ABFB	SEG:seg	:	:	:

Description

ATGSL10Glucan synthase-like 10 [Source:UniProtKB/TrEMBL;Acc:A0A178V7F9]

Coordinates

chr3:-:2264862..2279916

Molecular Weight (calculated)

217392.0 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.028

Length

1892 amino acids

Sequence
(BLAST)

0001: MSRAESSWER LVNAALRRDR TGGVAGGNQS SIVGYVPSSL SNNRDIDAIL RAADEIQDED PNIARILCEH GYSLAQNLDP NSEGRGVLQF KTGLMSVIKQ
0101: KLAKREVGTI DRSQDILRLQ EFYRLYREKN NVDTLKEEEK QLRESGAFTD ELERKTVKRK RVFATLKVLG SVLEQLAKEI PEELKHVIDS DAAMSEDTIA
0201: YNIIPLDAPV TTNATTTFPE VQAAVAALKY FPGLPKLPPD FPIPATRTAD MLDFLHYIFG FQKDSVSNQR EHIVLLLANE QSRLNIPEET EPKLDDAAVR
0301: KVFLKSLENY IKWCDYLCIQ PAWSNLEAIN GDKKLLFLSL YFLIWGEAAN IRFLPECLCY IFHHMVREMD EILRQQVARP AESCMPVDSR GSDDGVSFLD
0401: HVIAPLYGVV SAEAFNNDNG RAPHSAWRNY DDFNEYFWSL HSFELGWPWR TSSSFFQKPI PRKKYELKTG RAKHRGKTSF VEHRTFLHLY HSFHRLWIFL
0501: AMMFQALAII AFNKDDLTSR KTLLQILSLG PTFVVMKFSE SVLEVIMMYG AYSTTRRLAV SRIFLRFIWF GLASVFISFL YVKSLKAPNS DSPIVQLYLI
0601: VIAIYGGVQF FFSILMRIPT CHNIANKCDR WPVIRFFKWM RQERHYVGRG MYERTSDFIK YLLFWLVVLS AKFSFAYFLQ IKPLVGPTRM IVKQNNIPYS
0701: WHDFVSRKNY NALTVASLWA PVVAIYLLDI HIFYTIFSAF LGFLLGARDR LGEIRSLEAI HKLFEEFPGA FMRALHVPLT NRTSDTSHQT VDKKNKVDAA
0801: HFAPFWNQII KSLREEDYIT DFEMELLLMP KNSGRLELVQ WPLFLLSSKI LLAKEIAAES NSQEEILERI ERDDYMKYAV EEVYHTLKLV LTETLEAEGR
0901: LWVERIYEDI QTSLKERNIH HDFQLNKLSL VITRVTALLG ILKENETPEH AKGAIKALQD LYDVMRLDIL TFNMRGHYET WNLLTQAWNE GRLFTKLKWP
1001: KDPELKALVK RLYSLFTIKD SAAHVPRNLE ARRRLQFFTN SLFMDVPPPK SVRKMLSFSV FTPYYSEVVL YSMAELTKRN EDGISILFYL QKIYPDEWKN
1101: FLARIGRDEN ALEGDLDNER DILELRFWAS YRGQTLARTV RGMMYYRKAL MLQSYLERKA GNDATDAEGF ELSPEARAQA DLKFTYVVTC QIYGRQKEDQ
1201: KPEAVDIALL MQRNEALRIA YIDVVDSPKE GKSHTEYYSK LVKADISGKD KEIYSIKLPG DPKLGEGKPE NQNHAIVFTR GNAIQTIDMN QDNYFEEALK
1301: MRNLLEEFDR DHGIRPPTIL GVREHVFTGS VSSLASFMSN QETSFVTLGQ RVLAKPLKIR MHYGHPDVFD RVFHITRGGI SKASRVINIS EDIFAGFNTT
1401: LRQGNVTHHE YIQVGKGRDV GLNQIALFEG KVAGGNGEQV LSRDVYRLGQ LLDFFRMMSF FFTTVGFYLC TMLTVLTVYI FLYGRAYLAL SGVGATIRER
1501: AILLDDTALS AALNAQFLFQ IGVFTAVPMV LGFILEQGFL QAIVSFITMQ FQLCTVFFTF SLGTRTHYFG RTILHGGARY QATGRGFVVK HIKFSENYRL
1601: YSRSHFVKAM EVILLLVVYL AYGNDEAGAV SYILLTVSSW FLAVSWLFAP YLFNPAGFEW QKVVEDFKEW TNWLFYRGGI GVKGAESWEA WWEEELSHIR
1701: TLSGRIMETI LSLRFFIFQY GIVYKLKLQG SDTSFAVYGW SWVAFAMIIV LFKVFTFSQK ISVNFQLLLR FIQGLSLLMA LAGIIVAVVL TPLSVTDIFA
1801: CVLAFIPTGW GILSIACAWK PVLKRMGMWK SIRSLARLYD ALMGMLIFLP VALCSWFPFV STFQTRMMFN QAFSRGLEIS LILAGDNPNS GL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.