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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
golgi: 23128297
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms, gfp PMID: 23128297 doi
M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G520600.3 Wheat cytosol 99.32 98.54
TraesCS4B01G351900.1 Wheat cytosol 98.21 98.06
HORVU4Hr1G085510.11 Barley cytosol 98.06 98.06
Os03t0119500-01 Rice plasma membrane 88.13 88.04
KXG40330 Sorghum cytosol 86.29 86.02
Zm00001d027392_P003 Maize cytosol 85.61 85.03
Solyc01g006350.2.1 Tomato endoplasmic reticulum, nucleus 43.91 74.44
GSMUA_Achr5P11660_001 Banana cytosol, peroxisome, plasma membrane 63.66 74.31
PGSC0003DMT400082009 Potato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.7 74.13
GSMUA_Achr5P11670_001 Banana cytosol 10.98 71.58
KRH36300 Soybean cytosol 71.48 71.41
KRG93041 Soybean mitochondrion 71.38 71.34
CDY05323 Canola golgi, plasma membrane 44.85 71.05
VIT_06s0004g01200.t01 Wine grape cytosol 67.75 70.41
CDY67747 Canola mitochondrion 23.53 69.57
AT3G07160.2 Thale cress cytosol 67.38 67.81
CDY24642 Canola cytosol 67.8 67.63
Bra029628.1-P Field mustard cytosol 67.75 67.43
CDY08011 Canola cytosol 65.97 66.07
Bra001239.1-P Field mustard mitochondrion 65.97 65.86
CDX74058 Canola mitochondrion 65.76 64.07
Solyc01g006360.2.1 Tomato nucleus 25.53 63.7
CDY34913 Canola cytosol 62.03 62.45
Bra040364.1-P Field mustard cytosol 62.6 62.38
TraesCS7D01G026700.1 Wheat mitochondrion 61.19 60.8
CDY67918 Canola cytosol, nucleus, plasma membrane 29.78 59.75
TraesCS7D01G147700.1 Wheat plastid 46.22 45.13
TraesCS3D01G201500.1 Wheat cytosol 44.28 43.88
TraesCS5D01G111000.2 Wheat mitochondrion 43.49 43.69
TraesCS7D01G554900.1 Wheat plastid 45.12 43.69
TraesCS4D01G317900.5 Wheat mitochondrion 44.75 43.63
TraesCS2D01G600000.1 Wheat plastid 44.7 43.48
TraesCS6D01G405600.1 Wheat plastid 44.49 43.02
TraesCS3D01G292500.1 Wheat cytosol, nucleus, peroxisome 40.18 42.79
TraesCS3D01G246000.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 33.3 41.88
TraesCS6D01G144200.1 Wheat cytosol 40.81 39.87
TraesCS6D01G405900.1 Wheat mitochondrion 5.93 33.53
TraesCS6D01G406000.1 Wheat cytosol 4.99 29.59
Protein Annotations
KEGG:00500+2.4.1.34MapMan:21.7.1InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824
GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
InterPro:Glyco_trans_48PFAM:PF02364PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF12SMART:SM01205
TMHMM:TMhelixEnsemblPlantsGene:TraesCS4D01G346600EnsemblPlants:TraesCS4D01G346600.1SEG:seg::
Description
No Description!
Coordinates
chr4D:-:500414666..500448460
Molecular Weight (calculated)
216999.0 Da
IEP (calculated)
8.077
GRAVY (calculated)
0.023
Length
1904 amino acids
Sequence
(BLAST)
0001: MARAEANWER LVRAALRGDR MGGVYGVPAS GIAGNVPSSL GNNTHIDEVL RAADEIQDED PTVARILCEH AYALAQNLDP NSEGRGVLQF KTGLMSVIRQ
0101: KLAKREGGAI DRSQDIAKLQ EFYKLYRERH KVDELCDDEM KLRESGVFSG NLGELERKTL KRKKVLATLK VLWSVIEDIT KEISPEDAAN LISEEMKKVM
0201: QKDAARTEDV VAYNIIPLDS LSTTNLIVTF PEVRAAISSL QYHRDLPRLP NTISVPDARN SDMLDLLHCV FGFQKDNVSN QREHIVHLLA NEQSRLGKLS
0301: GNEPKIDEGA VHVVFSKSLD NYIKWCNYLP LRPVWNNIES LTKEKKLLYV CLYYLIWGEA ANVRFLPEGL CYIFHHLARE LEVIMQKQTA EPAGSCISND
0401: GVSFLDQVIY PLYEIVAAEA GNNDNGRAAH SAWRNYDDFN EFFWSEKCFQ LGWPWKLSNP FFSKPSRKEQ GLISRNHHYG KTSFVEHRTF LHLYHSFHRL
0501: WMFLLLMFQG LTIIAFNNGS FDTNTVLELL SLGPTYIIME FIESVLDILM MYGAYSTSRG SAITRVIWRF CWFTASSLVI CYLYIKALQD GVQSAPFKIY
0601: VVVISAYAGF QIIISLLMSV PCCRGFTNAC YSWSFVRLAK WMHQEHNYVG RGLHERPLDY IKYVAFWLVI FAAKFSFTYF LQIKPLVKPT RLIISFKGLQ
0701: YQWHDFVSKN NHNAITILAL WAPVASIYLL DIHVFYTIMS AIVGFLLGAR DRLGEIRSVE AVHRFFEKFP EVFMDKLHVA VPKRKQLLSS GQQAELNKLD
0801: ASRFAPFWNE IVKNLREEDY ISNTELDLLL MPKNIGGLPI VQWPLFLLAS KVFLAKDIAV DCNDSQDELW LRISKDEYMQ YAVEECFHSI KYILSSILDK
0901: EGHLWVQRIF DGIQESISKN NIQSDIHFSK LPNVIAKLVA VAGILKETES ADMKKGAVNA IQDLYEVVHH EVLFVDLSGN IDDWSQINRA RAEGRLFSNL
1001: KWPNEPGLKD MIKRLHSLLT IKESAANVPK NLEASRRLQF FTNSLFMQMP LARPVSEMLS FSVFTPYYSE TVLYSIAELQ KKNEDGISTL FYLQKIYPDE
1101: WKNFLTRINR DENAADTELF SSANDILELR LWASYRGQTL ARTVRGMMYY RKALMLQSYL ERMHSEDLES AFDMAGLADT HFEYSPEARA QADLKFTYVV
1201: TCQIYGVQKG EGKPEAADIA LLMQRNEALR IAYIDVVESV KNGKPSTEYY SKLVKADIHG KDKEIYSVKL PGNPKLGEGK PENQNHAVIF TRGNAVQTID
1301: MNQDNYFEEA LKMRNLLEEF SQNHGKFRPS ILGVREHVFT GSVSSLASFM SNQETSFVTL GQRVLSNPLK VRMHYGHPDV FDRIFHITRG GISKASRIIN
1401: ISEDIFAGFN STLRQGNITH HEYIQVGKGR DVGLNQIALF EGKVAGGNGE QVLSRDIYRL GQLFDFFRML SFYVTTVGFY FCTMLTVLTV YIFLYGKTYL
1501: ALSGVGESIQ NRADIQGNKA LSVALNTQFL FQIGVFTAIP MILGFILEEG VLTAFVSFIT MQFQLCSVFF TFSLGTRTHY FGRTILHGGA KYRATGRGFV
1601: VRHIKFAENY RLYSRSHFVK GLEVALLLVI FLAYGFNNSG AIGYILLSIS SWFMALSWLF APYVFNPSGF EWQKVVEDFR DWTNWLFYRG GIGVKGEESW
1701: EAWWDEELAH IHTFRGRILE TILSLRFFIF QYGVVYHMHA AKESTTLSVY WVSWAVLGGL FVLLMVFSLN PKAMVHFQLL LRLVKSIALL VVLAGLVVAI
1801: AMTPLTVLDV LASILAYVPT GWGILSIAVA WKPIVKRLGL WKIVRSLARL YDAGMGMIIF VPIAICSWFP FISTFQTRLL FNQAFSRGLE ISLILAGNNQ
1901: NAGI
Best Arabidopsis Sequence Match ( AT3G07160.1 )
(BLAST)
0001: MSRAESSWER LVNAALRRDR TGGVAGGNQS SIVGYVPSSL SNNRDIDAIL RAADEIQDED PNIARILCEH GYSLAQNLDP NSEGRGVLQF KTGLMSVIKQ
0101: KLAKREVGTI DRSQDILRLQ EFYRLYREKN NVDTLKEEEK QLRESGAFTD ELERKTVKRK RVFATLKVLG SVLEQLAKEI PEELKHVIDS DAAMSEDTIA
0201: YNIIPLDAPV TTNATTTFPE VQAAVAALKY FPGLPKLPPD FPIPATRTAD MLDFLHYIFG FQKDSVSNQR EHIVLLLANE QSRLNIPEET EPKLDDAAVR
0301: KVFLKSLENY IKWCDYLCIQ PAWSNLEAIN GDKKLLFLSL YFLIWGEAAN IRFLPECLCY IFHHMVREMD EILRQQVARP AESCMPVDSR GSDDGVSFLD
0401: HVIAPLYGVV SAEAFNNDNG RAPHSAWRNY DDFNEYFWSL HSFELGWPWR TSSSFFQKPI PRKKLKTGRA KHRGKTSFVE HRTFLHLYHS FHRLWIFLAM
0501: MFQALAIIAF NKDDLTSRKT LLQILSLGPT FVVMKFSESV LEVIMMYGAY STTRRLAVSR IFLRFIWFGL ASVFISFLYV KSLKAPNSDS PIVQLYLIVI
0601: AIYGGVQFFF SILMRIPTCH NIANKCDRWP VIRFFKWMRQ ERHYVGRGMY ERTSDFIKYL LFWLVVLSAK FSFAYFLQIK PLVGPTRMIV KQNNIPYSWH
0701: DFVSRKNYNA LTVASLWAPV VAIYLLDIHI FYTIFSAFLG FLLGARDRLG EIRSLEAIHK LFEEFPGAFM RALHVPLTNR TSDTSHQTVD KKNKVDAAHF
0801: APFWNQIIKS LREEDYITDF EMELLLMPKN SGRLELVQWP LFLLSSKILL AKEIAAESNS QEEILERIER DDYMKYAVEE VYHTLKLVLT ETLEAEGRLW
0901: VERIYEDIQT SLKERNIHHD FQLNKLSLVI TRVTALLGIL KENETPEHAK GAIKALQDLY DVMRLDILTF NMRGHYETWN LLTQAWNEGR LFTKLKWPKD
1001: PELKALVKRL YSLFTIKDSA AHVPRNLEAR RRLQFFTNSL FMDVPPPKSV RKMLSFSVFT PYYSEVVLYS MAELTKRNED GISILFYLQK IYPDEWKNFL
1101: ARIGRDENAL EGDLDNERDI LELRFWASYR GQTLARTVRG MMYYRKALML QSYLERKAGN DATDAEGFEL SPEARAQADL KFTYVVTCQI YGRQKEDQKP
1201: EAVDIALLMQ RNEALRIAYI DVVDSPKEGK SHTEYYSKLV KADISGKDKE IYSIKLPGDP KLGEGKPENQ NHAIVFTRGN AIQTIDMNQD NYFEEALKMR
1301: NLLEEFDRDH GIRPPTILGV REHVFTGSVS SLASFMSNQE TSFVTLGQRV LAKPLKIRMH YGHPDVFDRV FHITRGGISK ASRVINISED IFAGFNTTLR
1401: QGNVTHHEYI QVGKGRDVGL NQIALFEGKV AGGNGEQVLS RDVYRLGQLL DFFRMMSFFF TTVGFYLCTM LTVLTVYIFL YGRAYLALSG VGATIRERAI
1501: LLDDTALSAA LNAQFLFQIG VFTAVPMVLG FILEQGFLQA IVSFITMQFQ LCTVFFTFSL GTRTHYFGRT ILHGGARYQA TGRGFVVKHI KFSENYRLYS
1601: RSHFVKAMEV ILLLVVYLAY GNDEAGAVSY ILLTVSSWFL AVSWLFAPYL FNPAGFEWQK VVEDFKEWTN WLFYRGGIGV KGAESWEAWW EEELSHIRTL
1701: SGRIMETILS LRFFIFQYGI VYKLKLQGSD TSFAVYGWSW VAFAMIIVLF KVFTFSQKIS VNFQLLLRFI QGLSLLMALA GIIVAVVLTP LSVTDIFACV
1801: LAFIPTGWGI LSIACAWKPV LKRMGMWKSI RSLARLYDAL MGMLIFLPVA LCSWFPFVST FQTRMMFNQA FSRGLEISLI LAGDNPNSGL
Arabidopsis Description
ATGSL10Glucan synthase-like 10 [Source:UniProtKB/TrEMBL;Acc:A0A178V7F9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.