Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 3
- golgi 1
- plastid 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
endoplasmic reticulum: 29145071 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082009 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 97.68 | 95.56 |
| CDY67747 | Canola | mitochondrion | 43.01 | 75.0 |
| CDY05323 | Canola | golgi, plasma membrane | 78.36 | 73.21 |
| Solyc03g111570.2.1 | Tomato | nucleus, plastid | 69.1 | 69.41 |
| GSMUA_Achr5P11660_001 | Banana | cytosol, peroxisome, plasma membrane | 73.91 | 50.89 |
| KRH36300 | Soybean | cytosol | 83.7 | 49.32 |
| VIT_06s0004g01200.t01 | Wine grape | cytosol | 80.41 | 49.29 |
| KRG93041 | Soybean | mitochondrion | 83.26 | 49.08 |
| AT3G07160.2 | Thale cress | cytosol | 79.07 | 46.93 |
| CDY24642 | Canola | cytosol | 78.36 | 46.1 |
| Bra029628.1-P | Field mustard | cytosol | 78.27 | 45.95 |
| CDY08011 | Canola | cytosol | 76.85 | 45.4 |
| Bra001239.1-P | Field mustard | mitochondrion | 76.05 | 44.78 |
| Os03t0119500-01 | Rice | plasma membrane | 75.24 | 44.33 |
| KXG40330 | Sorghum | cytosol | 74.8 | 43.98 |
| CDX74058 | Canola | mitochondrion | 76.49 | 43.96 |
| TraesCS4D01G346600.1 | Wheat | golgi | 74.44 | 43.91 |
| TraesCS4B01G351900.1 | Wheat | cytosol | 74.53 | 43.89 |
| HORVU4Hr1G085510.11 | Barley | cytosol | 74.27 | 43.8 |
| Zm00001d027392_P003 | Maize | cytosol | 74.62 | 43.71 |
| TraesCS5A01G520600.3 | Wheat | cytosol | 74.27 | 43.46 |
| CDY34913 | Canola | cytosol | 72.4 | 42.99 |
| Bra040364.1-P | Field mustard | cytosol | 71.95 | 42.28 |
| Solyc07g053980.2.1 | Tomato | nucleus | 50.76 | 32.66 |
| Solyc02g078230.1.1 | Tomato | cytosol | 50.22 | 31.6 |
| Solyc11g005980.1.1 | Tomato | cytosol, plastid | 53.7 | 31.23 |
| Solyc01g006370.2.1 | Tomato | nucleus | 53.43 | 30.8 |
| Solyc07g056260.2.1 | Tomato | cytosol, plastid | 51.56 | 30.3 |
| Solyc01g073750.2.1 | Tomato | nucleus | 46.48 | 29.03 |
| Solyc07g061920.2.1 | Tomato | cytosol | 48.53 | 27.89 |
| CDY67918 | Canola | cytosol, nucleus, plasma membrane | 11.04 | 13.07 |
| Solyc01g006360.2.1 | Tomato | nucleus | 1.25 | 1.83 |
| GSMUA_Achr5P11670_001 | Banana | cytosol | 0.36 | 1.37 |
| Solyc03g111560.2.1 | Tomato | nucleus | 0.98 | 1.34 |
Protein Annotations
| KEGG:00500+2.4.1.34 | MapMan:21.7.1 | GO:GO:0000148 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003843 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006075 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| InterPro:Glyco_trans_48 | UniProt:K4ASK1 | PFAM:PF02364 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF12 | EnsemblPlantsGene:Solyc01g006350.2 |
| EnsemblPlants:Solyc01g006350.2.1 | TMHMM:TMhelix | UniParc:UPI00027620BC | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:-:934429..952385
Molecular Weight (calculated)
128374.0 Da
IEP (calculated)
7.462
GRAVY (calculated)
0.021
Length
1123 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLVYSEVLER NKADAARFAP FWNEIVKNLR EEDYITNLEM EQLLMPKNSG SLPLVQWPLF LLASKIFLAK DIAVESKDSQ DELWDRISRD DYMIYAVEEC
0101: YYAIKFVLTS ILDDEGNDEG KKWVERIYED IRGSISKRSI NVDVDMNKLP LVIQKVTALM GILKKEHTPE LETGAVKAIQ DLYDVLRLDV LRFNMRDHIE
0201: TWNTLSKARN EGRLFSKLKW PRDAELMELI KRLYSLLTIK ESAANIPKNL EARRRLEFFT NSLFMEMPVT RPVREMLSFS VFTPYYSETV LYSMSELLKK
0301: NEDGISILFY LQKIYPDEWK NFLARIGRDE NISEKELNDN PNDILELRFW ASYRGQTLAR TVRGMMYYRK ALMLQSYLEG MITGDTEAGT TRNEITDTQG
0401: FDLSPESRAQ ADLKFTYVVT CQIYGKQKEE QKPEAADIAL LMQRNEALRV AFIDEVETLK EGKVNKEYIS KLVKADINGK DKEIYSIKLP GNPKLGEGKP
0501: ENQNHAIVFT RGNAVQTIDM NQDNYFEEAL KVRNLLEEFF QDYGVHLPTI LGVREHVFTG SVSSLASFMS NQEASFVTMG QRVLANPLKV RMHYGHPDVF
0601: DRIFHITRGG ISKASRVINI SEDIFAGFNS TLRQGNITHH EYIQVGKGRD VGLNQIALFE GKVAGGNGEQ VLSRDVYRLG QLFDFFRMLS FYFTTVGYYF
0701: CTMLTVLSVY AFLYGKAYLA LSGVGATIQD RANILQNTAL SAALNAQFLF QIGVFTAVPM ILGFILEQGF LRAVVGFVTM QFQLCTVFFT FSLGTRTHYF
0801: GRTILHGGAK YHATGRGFVV KHIKFTENYR LYSRSHFVKG MEIVLLLVVY AAYGYNEGGA LSYILLTVSS WFLAISWLFA PYLFNPAGFE WQKTVEDFRD
0901: WTNWLLYRGG IGVKGEESWE AWWDEELAHI RTFGGRVMET ILSLRFFIFQ YGIVYKLDVQ GTNTSLTVYG FSWVAFAVIL LLFKVFTFSQ KISVNFQLLL
1001: RFIQGLSFLL AVAGLAAAVV LTELTVTDVF ACILAFIPTG WGILSIAAAW KPLIKKMGMW KSFRSVARLF DAGMGVLIFI PIALFSWFPF ISTFQTRLMF
1101: NQAFSRGLEI SLILAGNNPN TGL
0101: YYAIKFVLTS ILDDEGNDEG KKWVERIYED IRGSISKRSI NVDVDMNKLP LVIQKVTALM GILKKEHTPE LETGAVKAIQ DLYDVLRLDV LRFNMRDHIE
0201: TWNTLSKARN EGRLFSKLKW PRDAELMELI KRLYSLLTIK ESAANIPKNL EARRRLEFFT NSLFMEMPVT RPVREMLSFS VFTPYYSETV LYSMSELLKK
0301: NEDGISILFY LQKIYPDEWK NFLARIGRDE NISEKELNDN PNDILELRFW ASYRGQTLAR TVRGMMYYRK ALMLQSYLEG MITGDTEAGT TRNEITDTQG
0401: FDLSPESRAQ ADLKFTYVVT CQIYGKQKEE QKPEAADIAL LMQRNEALRV AFIDEVETLK EGKVNKEYIS KLVKADINGK DKEIYSIKLP GNPKLGEGKP
0501: ENQNHAIVFT RGNAVQTIDM NQDNYFEEAL KVRNLLEEFF QDYGVHLPTI LGVREHVFTG SVSSLASFMS NQEASFVTMG QRVLANPLKV RMHYGHPDVF
0601: DRIFHITRGG ISKASRVINI SEDIFAGFNS TLRQGNITHH EYIQVGKGRD VGLNQIALFE GKVAGGNGEQ VLSRDVYRLG QLFDFFRMLS FYFTTVGYYF
0701: CTMLTVLSVY AFLYGKAYLA LSGVGATIQD RANILQNTAL SAALNAQFLF QIGVFTAVPM ILGFILEQGF LRAVVGFVTM QFQLCTVFFT FSLGTRTHYF
0801: GRTILHGGAK YHATGRGFVV KHIKFTENYR LYSRSHFVKG MEIVLLLVVY AAYGYNEGGA LSYILLTVSS WFLAISWLFA PYLFNPAGFE WQKTVEDFRD
0901: WTNWLLYRGG IGVKGEESWE AWWDEELAHI RTFGGRVMET ILSLRFFIFQ YGIVYKLDVQ GTNTSLTVYG FSWVAFAVIL LLFKVFTFSQ KISVNFQLLL
1001: RFIQGLSFLL AVAGLAAAVV LTELTVTDVF ACILAFIPTG WGILSIAAAW KPLIKKMGMW KSFRSVARLF DAGMGVLIFI PIALFSWFPF ISTFQTRLMF
1101: NQAFSRGLEI SLILAGNNPN TGL
0001: MSRAESSWER LVNAALRRDR TGGVAGGNQS SIVGYVPSSL SNNRDIDAIL RAADEIQDED PNIARILCEH GYSLAQNLDP NSEGRGVLQF KTGLMSVIKQ
0101: KLAKREVGTI DRSQDILRLQ EFYRLYREKN NVDTLKEEEK QLRESGAFTD ELERKTVKRK RVFATLKVLG SVLEQLAKEI PEELKHVIDS DAAMSEDTIA
0201: YNIIPLDAPV TTNATTTFPE VQAAVAALKY FPGLPKLPPD FPIPATRTAD MLDFLHYIFG FQKDSVSNQR EHIVLLLANE QSRLNIPEET EPKLDDAAVR
0301: KVFLKSLENY IKWCDYLCIQ PAWSNLEAIN GDKKLLFLSL YFLIWGEAAN IRFLPECLCY IFHHMVREMD EILRQQVARP AESCMPVDSR GSDDGVSFLD
0401: HVIAPLYGVV SAEAFNNDNG RAPHSAWRNY DDFNEYFWSL HSFELGWPWR TSSSFFQKPI PRKKLKTGRA KHRGKTSFVE HRTFLHLYHS FHRLWIFLAM
0501: MFQALAIIAF NKDDLTSRKT LLQILSLGPT FVVMKFSESV LEVIMMYGAY STTRRLAVSR IFLRFIWFGL ASVFISFLYV KSLKAPNSDS PIVQLYLIVI
0601: AIYGGVQFFF SILMRIPTCH NIANKCDRWP VIRFFKWMRQ ERHYVGRGMY ERTSDFIKYL LFWLVVLSAK FSFAYFLQIK PLVGPTRMIV KQNNIPYSWH
0701: DFVSRKNYNA LTVASLWAPV VAIYLLDIHI FYTIFSAFLG FLLGARDRLG EIRSLEAIHK LFEEFPGAFM RALHVPLTNR TSDTSHQTVD KKNKVDAAHF
0801: APFWNQIIKS LREEDYITDF EMELLLMPKN SGRLELVQWP LFLLSSKILL AKEIAAESNS QEEILERIER DDYMKYAVEE VYHTLKLVLT ETLEAEGRLW
0901: VERIYEDIQT SLKERNIHHD FQLNKLSLVI TRVTALLGIL KENETPEHAK GAIKALQDLY DVMRLDILTF NMRGHYETWN LLTQAWNEGR LFTKLKWPKD
1001: PELKALVKRL YSLFTIKDSA AHVPRNLEAR RRLQFFTNSL FMDVPPPKSV RKMLSFSVFT PYYSEVVLYS MAELTKRNED GISILFYLQK IYPDEWKNFL
1101: ARIGRDENAL EGDLDNERDI LELRFWASYR GQTLARTVRG MMYYRKALML QSYLERKAGN DATDAEGFEL SPEARAQADL KFTYVVTCQI YGRQKEDQKP
1201: EAVDIALLMQ RNEALRIAYI DVVDSPKEGK SHTEYYSKLV KADISGKDKE IYSIKLPGDP KLGEGKPENQ NHAIVFTRGN AIQTIDMNQD NYFEEALKMR
1301: NLLEEFDRDH GIRPPTILGV REHVFTGSVS SLASFMSNQE TSFVTLGQRV LAKPLKIRMH YGHPDVFDRV FHITRGGISK ASRVINISED IFAGFNTTLR
1401: QGNVTHHEYI QVGKGRDVGL NQIALFEGKV AGGNGEQVLS RDVYRLGQLL DFFRMMSFFF TTVGFYLCTM LTVLTVYIFL YGRAYLALSG VGATIRERAI
1501: LLDDTALSAA LNAQFLFQIG VFTAVPMVLG FILEQGFLQA IVSFITMQFQ LCTVFFTFSL GTRTHYFGRT ILHGGARYQA TGRGFVVKHI KFSENYRLYS
1601: RSHFVKAMEV ILLLVVYLAY GNDEAGAVSY ILLTVSSWFL AVSWLFAPYL FNPAGFEWQK VVEDFKEWTN WLFYRGGIGV KGAESWEAWW EEELSHIRTL
1701: SGRIMETILS LRFFIFQYGI VYKLKLQGSD TSFAVYGWSW VAFAMIIVLF KVFTFSQKIS VNFQLLLRFI QGLSLLMALA GIIVAVVLTP LSVTDIFACV
1801: LAFIPTGWGI LSIACAWKPV LKRMGMWKSI RSLARLYDAL MGMLIFLPVA LCSWFPFVST FQTRMMFNQA FSRGLEISLI LAGDNPNSGL
0101: KLAKREVGTI DRSQDILRLQ EFYRLYREKN NVDTLKEEEK QLRESGAFTD ELERKTVKRK RVFATLKVLG SVLEQLAKEI PEELKHVIDS DAAMSEDTIA
0201: YNIIPLDAPV TTNATTTFPE VQAAVAALKY FPGLPKLPPD FPIPATRTAD MLDFLHYIFG FQKDSVSNQR EHIVLLLANE QSRLNIPEET EPKLDDAAVR
0301: KVFLKSLENY IKWCDYLCIQ PAWSNLEAIN GDKKLLFLSL YFLIWGEAAN IRFLPECLCY IFHHMVREMD EILRQQVARP AESCMPVDSR GSDDGVSFLD
0401: HVIAPLYGVV SAEAFNNDNG RAPHSAWRNY DDFNEYFWSL HSFELGWPWR TSSSFFQKPI PRKKLKTGRA KHRGKTSFVE HRTFLHLYHS FHRLWIFLAM
0501: MFQALAIIAF NKDDLTSRKT LLQILSLGPT FVVMKFSESV LEVIMMYGAY STTRRLAVSR IFLRFIWFGL ASVFISFLYV KSLKAPNSDS PIVQLYLIVI
0601: AIYGGVQFFF SILMRIPTCH NIANKCDRWP VIRFFKWMRQ ERHYVGRGMY ERTSDFIKYL LFWLVVLSAK FSFAYFLQIK PLVGPTRMIV KQNNIPYSWH
0701: DFVSRKNYNA LTVASLWAPV VAIYLLDIHI FYTIFSAFLG FLLGARDRLG EIRSLEAIHK LFEEFPGAFM RALHVPLTNR TSDTSHQTVD KKNKVDAAHF
0801: APFWNQIIKS LREEDYITDF EMELLLMPKN SGRLELVQWP LFLLSSKILL AKEIAAESNS QEEILERIER DDYMKYAVEE VYHTLKLVLT ETLEAEGRLW
0901: VERIYEDIQT SLKERNIHHD FQLNKLSLVI TRVTALLGIL KENETPEHAK GAIKALQDLY DVMRLDILTF NMRGHYETWN LLTQAWNEGR LFTKLKWPKD
1001: PELKALVKRL YSLFTIKDSA AHVPRNLEAR RRLQFFTNSL FMDVPPPKSV RKMLSFSVFT PYYSEVVLYS MAELTKRNED GISILFYLQK IYPDEWKNFL
1101: ARIGRDENAL EGDLDNERDI LELRFWASYR GQTLARTVRG MMYYRKALML QSYLERKAGN DATDAEGFEL SPEARAQADL KFTYVVTCQI YGRQKEDQKP
1201: EAVDIALLMQ RNEALRIAYI DVVDSPKEGK SHTEYYSKLV KADISGKDKE IYSIKLPGDP KLGEGKPENQ NHAIVFTRGN AIQTIDMNQD NYFEEALKMR
1301: NLLEEFDRDH GIRPPTILGV REHVFTGSVS SLASFMSNQE TSFVTLGQRV LAKPLKIRMH YGHPDVFDRV FHITRGGISK ASRVINISED IFAGFNTTLR
1401: QGNVTHHEYI QVGKGRDVGL NQIALFEGKV AGGNGEQVLS RDVYRLGQLL DFFRMMSFFF TTVGFYLCTM LTVLTVYIFL YGRAYLALSG VGATIRERAI
1501: LLDDTALSAA LNAQFLFQIG VFTAVPMVLG FILEQGFLQA IVSFITMQFQ LCTVFFTFSL GTRTHYFGRT ILHGGARYQA TGRGFVVKHI KFSENYRLYS
1601: RSHFVKAMEV ILLLVVYLAY GNDEAGAVSY ILLTVSSWFL AVSWLFAPYL FNPAGFEWQK VVEDFKEWTN WLFYRGGIGV KGAESWEAWW EEELSHIRTL
1701: SGRIMETILS LRFFIFQYGI VYKLKLQGSD TSFAVYGWSW VAFAMIIVLF KVFTFSQKIS VNFQLLLRFI QGLSLLMALA GIIVAVVLTP LSVTDIFACV
1801: LAFIPTGWGI LSIACAWKPV LKRMGMWKSI RSLARLYDAL MGMLIFLPVA LCSWFPFVST FQTRMMFNQA FSRGLEISLI LAGDNPNSGL
Arabidopsis Description
ATGSL10Glucan synthase-like 10 [Source:UniProtKB/TrEMBL;Acc:A0A178V7F9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.