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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • extracellular 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400073787 Potato plasma membrane 55.77 98.99
VIT_04s0044g01280.t01 Wine grape plastid 81.93 81.97
KRH53895 Soybean cytosol 34.59 81.66
Bra040806.1-P Field mustard cytosol, extracellular, plasma membrane 2.85 80.88
CDY47436 Canola extracellular 2.85 80.88
AT2G13680.1 Thale cress cytosol 79.6 79.93
KRH64044 Soybean plastid 80.48 79.65
Bra037213.1-P Field mustard cytosol 78.2 79.06
GSMUA_Achr5P16530_001 Banana cytosol 36.72 78.43
KRH59571 Soybean cytosol 79.03 77.94
Zm00001d035841_P002 Maize cytosol, golgi, plasma membrane, plastid 54.27 77.92
CDX81451 Canola cytosol, plastid 77.84 77.8
KRH43553 Soybean mitochondrion, plastid 76.54 77.63
OQU75971 Sorghum cytosol 76.28 77.32
TraesCS7A01G146200.1 Wheat cytosol 75.76 76.88
GSMUA_Achr7P16080_001 Banana plasma membrane 76.7 76.22
TraesCS7D01G147700.1 Wheat plastid 76.54 75.79
TraesCS7B01G048700.1 Wheat plastid 76.44 75.73
Os06t0182300-01 Rice plasma membrane 74.31 75.13
GSMUA_Achr10P... Banana cytosol 77.27 74.34
GSMUA_Achr5P16520_001 Banana plastid 42.47 72.89
CDX71163 Canola cytosol, extracellular, plasma membrane 3.0 71.6
Solyc01g006370.2.1 Tomato nucleus 62.14 61.6
Solyc01g073750.2.1 Tomato nucleus 56.34 60.51
OQU93478 Sorghum plasma membrane 9.17 59.2
Solyc07g056260.2.1 Tomato cytosol, plastid 54.84 55.42
Solyc03g111570.2.1 Tomato nucleus, plastid 32.0 55.28
Solyc01g006350.2.1 Tomato endoplasmic reticulum, nucleus 31.23 53.7
KRH36298 Soybean plasma membrane 4.66 52.94
Solyc07g061920.2.1 Tomato cytosol 53.29 52.66
Solyc02g078230.1.1 Tomato cytosol 43.4 46.95
Solyc07g053980.2.1 Tomato nucleus 42.21 46.7
KXG40423 Sorghum mitochondrion 30.97 42.14
HORVU4Hr1G063770.1 Barley plasma membrane 8.03 37.35
Solyc01g006360.2.1 Tomato nucleus 14.14 35.78
Solyc03g111560.2.1 Tomato nucleus 14.6 34.43
KRH54242 Soybean cytosol 4.14 27.21
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1ncoils:CoilInterPro:FKS1-like_dom1GO:GO:0000148
GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48InterPro:IPR023175UniProt:K4D4L1
PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF29SMART:SM01205
EnsemblPlantsGene:Solyc11g005980.1EnsemblPlants:Solyc11g005980.1.1TMHMM:TMhelixUniParc:UPI0002769C22InterPro:VPS_Vta1/CALS_NSEG:seg
Description
No Description!
Coordinates
chr11:+:776828..790557
Molecular Weight (calculated)
221195.0 Da
IEP (calculated)
9.208
GRAVY (calculated)
-0.047
Length
1931 amino acids
Sequence
(BLAST)
0001: MTNPARPAEG MDPPQTPVGG AGPSSLTRRP SRSAATTTFS MEVFDNEVVP SSLQSIAPIL RVAREIQNER PRVAYLCRFY AFEKAHRLDP TSGGRGVRQF
0101: KTNLFQRLER DNASSLASRV KKTDAREIES FYKQYYEQYV VSLNKGEQAD RAQLGKAYQT AGVLFEVLCA VNKSEKVEEV APEIIAAAND VQAKKEIYAP
0201: YNILPLDSAG ASQSIMQLEE VKAAVSALSN TRGLNWPASF EQQRQKTGEL DVLDWLRAMF GFQRDNVRNQ RENLSLLLAN IHIRLIPKAE PLNKLDDRAV
0301: DALMNKLFKN YKTWCKYLGK KHSLRLPQAQ QEAQQRKILY MGLYLLIWGE AANLRFMPEC LCYIFHNMAY ELHGLLAGNV SIVTGENIKP SYGGDDESFL
0401: RKVITPIYRV IDKEAKKSKD GKAPYSNWCN YDDLNEYFWS QDCFSLGWPM RDDGDFFKST RDTTQGKGAA NKKPGKMGKS YFVETRSFWH IFRSYDRLWT
0501: FFLLSLQAMV IFAWSGIPVL DIFKKDSLYN LSSIFITAAM LRFLQSILDL FLNFPGYHRW RFTDVLRNFL KVVVSLAWCV ILPLFYLQES NSELLTKIRS
0601: SLTFLDKMKG IPPMYLMAVA VYLLPNLLTT ALFIFPMLRR WIENSDWLVV RFLLWWSQPR IYVGRGMHES QFALIKYTLF WVLLLCAKFA FSYFIQIKPL
0701: IKPTKMIMNI NHVQYSWHEF FPDARNNYGA VVALWAPVVM VYFMDAQIWY AIFSTLCGGV IGAFDRLGEI RTLGMLRSRF QSLPGAFNTY LVPNDKADKK
0801: RFSLSKSFNE VSPSKRSEAA KFAQLWNEFI CSFREEDLIS DREMDLLLVP YSSDPSLKVM QWPPFLLASK IPIALDMALQ FRSKDADLWK RICADEYMKC
0901: AVIECYESFK LVLNALVVGE TEKRIIGIII KEVENSISKN TFLSSFRTGP LQNLCKKFVD LLEILRDGDP SKRNNVVIAL QDMLEIVTRD MMVNEIGELV
1001: ELGHSGRDSG KQLFANTDSR TAIAFPPPVT AQWEEQLRRL YLLLTVKESA VEVPTNLEAR RRISFFTNSL FMEMPRAPRV RKMLSFSVMT PYYSEETVYS
1101: KGDLEMENED GVSIIYYLQK IYPDEWNNFM ERLGCKKEQE VWEIEENILQ LRHWASLRGQ TLCRTVRGMM YYRRALKLQA FLDMASEGEI LEGYKAVTVP
1201: SEEDKKSQRS LYAQLEAVAD MKFTYVATCQ NYGIQKRNGD RHATDILNLM VNNPSLRVAY IDEVEEREGG KTQKVYYSVL VKAVDNLDQE IYRIKLPGAA
1301: KIGEGKPENQ NHAIVFSRGE ALQTIDMNQD NYLEEALKMR NLLEEFNEDH GVRAPTILGV REHIFTGSVS SLAWFMSNQE TSFVTIGQRV LARPLRVRFH
1401: YGHPDVFDRI FHITRGGISK ASRGINLSED IFAGFNSTLR RGNITHHEYI QVGKGRDVGL NQISLFEAKV ACGNGEQTLS RDLYRLGHRF DFFRMLSCYF
1501: TTTGFYISSM LVVLTVYAFL YGKLYLALSG LEQSIVKVAR SKGDDALKAA MASQSVVQLG LLMALPMVME IGLERGFRTA LGDIIIMNLQ LAAVFFTFSL
1601: GTKLHYFGRT ILHGGAKYRA TGRGFVVRHE KFAENYRMYS RSHFTKALEI MICLIAYQIF GVAVTDNIAF ILLSGSMWFL VISWLFAPFL FNPSGFEWQK
1701: IVDDWEDWGK WISNHGGIGV PATKSWESWW DEEQEHLQCS GLIGRFCEVL LSMRFLLFQY GIVYQLNVSN SDKSIMVYGL SWLVIVFVMV VLKIVSLGRK
1801: KFSADFQLMF RLLKLFLFIG FIVTFVMLFK FLSLTVGDIF ASLLAFLPTG WALLSIAQAC RPVVKGIGMW GSVKALARGY DYLMGLVIFT PVAVLAWFPF
1901: VSEFQTRLLF NQAFSRGLQI QRILAGGKKH K
Best Arabidopsis Sequence Match ( AT2G13680.1 )
(BLAST)
0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
Arabidopsis Description
CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.