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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 3
  • mitochondrion 1
  • cytosol 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:cytosol
plasma membrane: 18260611
plasma membrane: 19502382
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
BAC19889 Rice endoplasmic reticulum, extracellular, plasma membrane 11.57 91.7
OQU75971 Sorghum cytosol 90.37 90.6
Zm00001d035841_P002 Maize cytosol, golgi, plasma membrane, plastid 63.46 90.11
HORVU7Hr1G029930.1 Barley cytosol, plastid 90.47 90.09
TraesCS7A01G146200.1 Wheat cytosol 89.06 89.39
TraesCS7D01G147700.1 Wheat plastid 90.42 88.56
TraesCS7B01G048700.1 Wheat plastid 90.21 88.4
GSMUA_Achr5P16530_001 Banana cytosol 39.01 82.41
Bra040806.1-P Field mustard cytosol, extracellular, plasma membrane 2.88 80.88
GSMUA_Achr7P16080_001 Banana plasma membrane 79.32 77.97
CDY47436 Canola extracellular 2.77 77.94
KRH53895 Soybean cytosol 33.04 77.14
VIT_04s0044g01280.t01 Wine grape plastid 76.81 76.01
GSMUA_Achr10P... Banana cytosol 79.32 75.49
AT2G13680.1 Thale cress cytosol 74.87 74.36
Solyc11g005980.1.1 Tomato cytosol, plastid 75.13 74.31
Bra037213.1-P Field mustard cytosol 74.08 74.08
CDX81451 Canola cytosol, plastid 73.87 73.03
Os03t0128100-01 Rice cytosol, plasma membrane 23.72 72.36
KRH64044 Soybean plastid 73.72 72.17
KRH59571 Soybean cytosol 73.77 71.96
KRH43553 Soybean mitochondrion, plastid 71.73 71.95
Os01t0533000-00 Rice cytosol, plasma membrane 24.14 71.25
GSMUA_Achr5P16520_001 Banana plastid 41.83 71.02
CDX71163 Canola cytosol, extracellular, plasma membrane 2.93 69.14
PGSC0003DMT400018166 Potato cytosol 7.02 65.69
Os02t0832500-01 Rice plasma membrane 10.37 63.67
Os06t0728800-01 Rice plasma membrane 8.9 61.59
Os01t0533500-01 Rice plasma membrane 17.43 59.46
Os06t0112800-01 Rice plasma membrane 11.52 56.7
Os03t0128200-01 Rice mitochondrion 15.65 55.47
KRH36298 Soybean plasma membrane 4.82 54.12
Os06t0728902-01 Rice plastid 5.39 53.65
Os01t0672500-01 Rice plasma membrane 13.3 53.36
Os02t0832400-02 Rice nucleus, peroxisome, plasma membrane, plastid 25.5 51.75
Os01t0754200-03 Rice cytosol, mitochondrion, peroxisome, plasma membrane 42.67 45.53
Os03t0119500-01 Rice plasma membrane 44.45 44.54
PGSC0003DMT400018165 Potato cytosol, peroxisome, plasma membrane 26.65 42.21
Os01t0533100-00 Rice mitochondrion, plastid 10.21 42.03
Os02t0247000-01 Rice plasma membrane 6.07 39.46
Os06t0113150-00 Rice mitochondrion 8.17 31.9
KRH54242 Soybean cytosol 4.14 26.87
Os01t0533400-01 Rice plasma membrane 9.16 21.16
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1ProteinID:BAD72533.1InterPro:FKS1-like_dom1GO:GO:0000148
GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48InterPro:IPR023175EnsemblPlantsGene:Os06g0182300
EnsemblPlants:Os06t0182300-01PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF29
UniProt:Q5SMM3SMART:SM01205TMHMM:TMhelixUniParc:UPI000046D518InterPro:VPS_Vta1/CALS_NSEG:seg
Description
BETA-1,3-GLUCANASE ACTIVITY 5, GLUCAN SYNTHASE-LIKE 5, Oryza sativa callose synthase 5Callose synthase, Microsporogenesis, Male fertility (Os06t0182300-01)
Coordinates
chr6:-:4067116..4083811
Molecular Weight (calculated)
217781.0 Da
IEP (calculated)
8.830
GRAVY (calculated)
-0.006
Length
1910 amino acids
Sequence
(BLAST)
0001: MTGPRGGGGE DPPRTSSGAA ASASASSGVP NEPLTPTSML MSGQQAGLNR RGSRSAAMAT FSMEVFDNEV VPSTLSSIAP ILRVAAEIEP ERPRVAYLCR
0101: FYAFEKAHRL DQNSVGRGVR QFKTALLQRL EKDNSPSLAK RVKKTDAREI ESFYQQYYEN YVRALDKGEQ ADRAQLGKAY QTAGVLFEVL CAVNKNEKVE
0201: EVNPEIVRLH RDVQEKKDIY TPFNILPLDA ASASQSIMQM EEIKAAVAAL RNTRGLTWPS TFEPERQKGG DLDLLDWLRA MFGFQRDSVR NQREHLILLL
0301: ANVHIRLEPK PEPLSKACSF ATFYFADLTI WISMWIMKSP QGAQPQEIQQ RNILFLGLYL LIWGEAANIR FMPECLCYIF HNMAYELNGL LAGNVSIVTG
0401: ENIRPSYGGD EEAFLKKVVT PIYRVIKKES GKSKHGKTPH SAWCNYDDLN EYFWTTDCFS LGWPMRDDGD FFKSVHDSRP VTTAGSSSQK GSTKSTGKMN
0501: FVETRTFWHI FRSFDRMWTF YLLALQAMLI FAWSDYTLSQ ILQKDLLYSL SSIFVTAAFL QFLQSILDFV LNFPGHHKCK FLDAMRNILK IIASAAWAVI
0601: LPFFYISTAS KVNLPIKDLD KWFQYVKGVP PLYILAVAVY LIPNILSAAL FLLPCFRRWI ENSDWRIVRL LLWWSQKRIY VGRGMHESSV SLFKYTLFWI
0701: LLLCSKFAFS YFVQIKPLIK PTKDIMNVHN IHYEWHEFFP NASYNVGAVM SLWAPVLLVY LMDTQIWYAI FSTISGGVSG ALGRLGEVSP SKRTEAAKFA
0801: QLWNEVICSF REEDLISDKE MDLLVVPYSS DPSLKLMQWP LFLLASKIPI ALDMAAQFRP RDSDLWKRIC ADEYMKCAVL ECYESFKLVL NLLVIGENEK
0901: RIIGIIIKEI EANIAKNTFL ANFRMSALPV LCKKFVELVS ALKERDASKF DNVVLLLQDM LEVITRDMMV NEIRELAEFG HGNKDSVPRR QLFAGTGTKP
1001: AIVFPPPISA QWDEQIKRLY LLLTVKESAM DVPTNLEARR RIAFFTNSLF MDMPRAPRVR KMLSFSVMTP YYSEETVYSR NDLDLENEDG VSIIFYLQKI
1101: FPDEWNNFLE RIGCQRESEV WGNEENVLQL RHWASLRGQT LCRTVRGMMY YKRALKLQAF LDMASESEIL EGYKAVADPA EEEKKSQRSL SSQLEAIADM
1201: KFTYVATCQI YGNQKQSGDR RATDILNLMV NYPGLRVAYI DEVEERDGEK VQKVFYSVLV KALDNHDQEI YRIKLPGPAK LGEGKPENQN HAIVFTRGEA
1301: LQTIDMNQDN YLEEALKMRN LLEEFHENHG VRQPTILGVR EHIFTGSVSS LAWFMSNQET SFVTIGQRVL ANPLKVRFHY GHPDVFDRIF HITRGGISKA
1401: SCGINLSEDI FAGFNSTLRR GNVTHHEYIQ VGKGRDVGLN QISLFEAKVA CGNGEQTLSR DIYRLGHRFD FFRMLSCYFT TVGFYISSMM VVIIVYVFLY
1501: GRLYLALSGL ELAIMKQARM RGNTALQAAM GSQSIVQLGL LMALPMFMEI GLERGFRSAL GDFIIMQLQL CSVFFTFSLG TKSHYFGRTI LHGGAKYKAT
1601: GRGFVVRHVK FPENYRMYSR SHFVKGLELM LLLVVYQMYG DVATDSTAYI LLTSSMWFLV ITWLFAPFLF NPSGFEWQKI VDDWDDWSKW ISSRGGIGVP
1701: ANKAWESWWE EEQEHLQSTG FFGRLSEIIL SLRFFIFQYG IMYHLNISAG NKSISVYGLS WLVIVAVVMV LKVVSMGRKK FSADFQLMFR LLKLFLFIGS
1801: IGTLAILFTL LHLTVGDIFA SFLAFAPTGW AILQISQASK PVVKAFGLWG SVKALSRGYE YLMGILIFVP VAVLAWFPFV SEFQTRLLFN QAFSRGLQIS
1901: RILAGGKKQS
Best Arabidopsis Sequence Match ( AT2G13680.1 )
(BLAST)
0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
Arabidopsis Description
CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.