Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0728902-01 | Rice | plastid | 23.47 | 35.94 |
| HORVU6Hr1G031230.34 | Barley | plastid | 72.45 | 29.62 |
| Os01t0533100-00 | Rice | mitochondrion, plastid | 37.41 | 23.71 |
| Os03t0128200-01 | Rice | mitochondrion | 40.48 | 22.08 |
| Os06t0113150-00 | Rice | mitochondrion | 25.51 | 15.34 |
| Os02t0832400-02 | Rice | nucleus, peroxisome, plasma membrane, plastid | 40.48 | 12.65 |
| TraesCS6B01G182300.1 | Wheat | cytosol | 73.47 | 11.03 |
| TraesCS6A01G154400.1 | Wheat | cytosol | 72.11 | 10.88 |
| TraesCS6D01G144200.1 | Wheat | cytosol | 71.77 | 10.83 |
| KXG29910 | Sorghum | cytosol | 68.03 | 10.04 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane, plastid | 47.96 | 7.15 |
| Solyc07g061920.2.1 | Tomato | cytosol | 46.94 | 7.06 |
| AT3G14570.1 | Thale cress | cytosol | 44.9 | 6.68 |
| Os06t0182300-01 | Rice | plasma membrane | 39.46 | 6.07 |
| CDX98473 | Canola | cytosol | 40.14 | 6.05 |
| Bra027328.1-P | Field mustard | cytosol | 40.14 | 6.02 |
| KRH13524 | Soybean | cytosol | 40.14 | 6.01 |
| KRH21823 | Soybean | cytosol | 38.78 | 5.8 |
| Os03t0119500-01 | Rice | plasma membrane | 26.53 | 4.09 |
| Os01t0533400-01 | Rice | plasma membrane | 8.5 | 3.02 |
| Os01t0754200-03 | Rice | cytosol, mitochondrion, peroxisome, plasma membrane | 13.61 | 2.23 |
| VIT_19s0138g00120.t01 | Wine grape | mitochondrion, plasma membrane | 12.93 | 2.16 |
| Zm00001d016155_P001 | Maize | plastid | 2.38 | 0.64 |
| Os01t0533500-01 | Rice | plasma membrane | 1.02 | 0.54 |
| PGSC0003DMT400034375 | Potato | cytosol, mitochondrion, peroxisome, plasma membrane | 0.68 | 0.36 |
| Os06t0112800-01 | Rice | plasma membrane | 0.34 | 0.26 |
| HORVU6Hr1G031200.8 | Barley | endoplasmic reticulum | 1.02 | 0.25 |
| Os01t0533000-00 | Rice | cytosol, plasma membrane | 0.34 | 0.15 |
| Os06t0728800-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os03t0128100-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os02t0832500-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os01t0672500-01 | Rice | plasma membrane | 0.0 | 0.0 |
| BAC19889 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| KEGG:00500+2.4.1.34 | Gene3D:1.25.40.270 | MapMan:35.1 | UniProt:A0A0P0VH06 | ProteinID:BAS77880.1 | InterPro:CALS |
| GO:GO:0000148 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003843 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006075 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:IPR023175 | EnsemblPlantsGene:Os02g0247000 |
| EnsemblPlants:Os02t0247000-01 | PFAM:PF04652 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF21 | UniParc:UPI0002249717 | InterPro:VPS_Vta1/CALS_N |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF605 domain containing protein. (Os02t0247000-01)
Coordinates
chr2:+:8299604..8306389
Molecular Weight (calculated)
33087.9 Da
IEP (calculated)
10.325
GRAVY (calculated)
-0.454
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEIVEVGP SSRPLRYVPA QQRWRPTPTP LPPPPPPLPP PPAASAASSS GAGDAAAVAS AANQFDSEKL PQTLVSEIRP FLRVANQIEH ESPRVAYLCR
101: FHAFEKAHMM DPRSTGRGVR QFKTALLQRL EQDEKSTFTK RMAKSDSQEI RLFYEKKEKA DERELLPVLA EVLRAVQIGT GKEKQKRIAS ETFADKSALF
201: RYNILPLYPG STKQPIMLLP EIKVAVCAVF NVRSLPFANT KDHKNQMDIF LWMQSWFGFQ KGNVANQREH LILLLANMHA RLNPKSSSET MSSR
101: FHAFEKAHMM DPRSTGRGVR QFKTALLQRL EQDEKSTFTK RMAKSDSQEI RLFYEKKEKA DERELLPVLA EVLRAVQIGT GKEKQKRIAS ETFADKSALF
201: RYNILPLYPG STKQPIMLLP EIKVAVCAVF NVRSLPFANT KDHKNQMDIF LWMQSWFGFQ KGNVANQREH LILLLANMHA RLNPKSSSET MSSR
0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
Arabidopsis Description
CALS1Callose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AUE0]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.