Factsheet for Os01t0533400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G468600.1	Wheat	cytosol	4.96	13.4
TraesCS6D01G405900.1	Wheat	mitochondrion	5.44	13.35
BAC19889	Rice	endoplasmic reticulum, extracellular, plasma membrane	3.63	12.45
Os01t0533100-00	Rice	mitochondrion, plastid	6.89	12.28
TraesCS6B01G468500.1	Wheat	cytosol	6.89	12.26
Os03t0128200-01	Rice	mitochondrion	7.86	12.06
HORVU6Hr1G095120.2	Barley	cytosol, plastid	6.53	11.56
TraesCS6A01G419900.1	Wheat	cytosol	6.77	11.41
Os03t0128100-01	Rice	cytosol, plasma membrane	8.22	10.86
Os02t0832400-02	Rice	nucleus, peroxisome, plasma membrane, plastid	11.97	10.52
Os01t0533000-00	Rice	cytosol, plasma membrane	8.22	10.51
Os06t0112800-01	Rice	plasma membrane	4.84	10.31
Os02t0832500-01	Rice	plasma membrane	3.87	10.29
Os06t0113150-00	Rice	mitochondrion	5.68	9.61
Os03t0119500-01	Rice	plasma membrane	21.52	9.34
Os06t0182300-01	Rice	plasma membrane	21.16	9.16
Os01t0533500-01	Rice	plasma membrane	6.17	9.11
Os02t0247000-01	Rice	plasma membrane	3.02	8.5
Os01t0754200-03	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	17.65	8.16
Os01t0672500-01	Rice	plasma membrane	4.47	7.77
Os06t0728800-01	Rice	plasma membrane	2.54	7.61
Os06t0728902-01	Rice	plastid	1.57	6.77
Zm00001d024113_P001	Maize	cytosol	0.97	5.93

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4327808	EMBL:AK119447	ProteinID:BAB89138.1	ProteinID:BAB90329.1
ProteinID:BAF05166.1	ProteinID:BAS72526.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	GO:GO:0048046	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
EnsemblPlantsGene:Os01g0533400	EnsemblPlants:Os01t0533400-01	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF68	UniProt:Q8RUV9	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A26C9	RefSeq:XP_015621617.1	SEG:seg	:

Description

BETA-GALACTOSIDASE 5Glycoside hydrolase, family 35 protein. (Os01t0533400-01)

Coordinates

chr1:-:19295569..19302138

Molecular Weight (calculated)

91715.8 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.370

Length

827 amino acids

Sequence
(BLAST)

001: MMGRRGSSWC RWWVALLVLA VAADAVGCTS VSYDDRSLVI DGQRRIILSG SIHYPRSTPE MWPDLIKKAK EGGLDAIETY IFWNGHEPHR RQYNFEGNYD
101: VVRFFKEIQN AGMYAILRIG PYICGEWNYG GLPAWLRDIP GMQFRLHNEP FENEMETFTT LIVNKMKDSK MFAEQGGPII LAQIENEYGN IMGKLNNNQS
201: ASEYIHWCAD MANKQNVGVP WIMCQQDDDV PHNVVNTCNG FYCHDWFPNR TGIPKIWTEN WTGWFKAWDK PDFHRSAEDI AFAVAMFFQK RGSLQNYYMY
301: HGGTNFGRTS GGPYITTSYD YDAPLDEYGN LRQPKYGHLK ELHSVLKSME KTLVHGEYFD TNYGDNITVT KYTLDSSSAC FINNRFDDKD VNVTLDGATH
401: LLPAWSVSIL PDCKTVAFNS AKIKTQTSVM VKKPNTAEQE QESLKWSWMP ENLSPFMTDE KGNFRKNELL EQIVTSTDQS DYLWYRTSLN HKGEGSYKLY
501: VNTTGHELYA FVNGKLIGKN HSADGDFVFQ LESPVKLHDG KNYISLLSAT VGLKNYGPSF EKMPTGIVGG PVKLIDSNGT AIDLSNSSWS YKAGLASEYR
601: QIHLDKPGYK WNGNNGTIPI NRPFTWYKAT FEAPSGEDAV VVDLLGLNKG VAWVNGNNLG RYWPSYTAAE MAGCHRCDYR GAFQAEGDGT RCLTGCGEPS
701: QRYYHVPRSF LAAGEPNTLL LFEEAGGDPS GVALRTVVPG AVCTSGEAGD AVTLSCGGGH AVSSVDVASF GVGRGRCGGY EGGCESKAAY EAFTAACVGK
801: ESCTVEITGA FAGAGCLSGV LTVQATC

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.