Factsheet for PGSC0003DMT400034375

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074555	Potato	plasma membrane	50.09	60.57
HORVU6Hr1G031200.8	Barley	endoplasmic reticulum	73.33	33.53
PGSC0003DMT400073787	Potato	plasma membrane	61.62	31.43
PGSC0003DMT400065769	Potato	nucleus, plasma membrane, vacuole	7.93	28.95
Solyc07g061920.2.1	Tomato	cytosol	98.74	28.05
VIT_19s0138g00120.t01	Wine grape	mitochondrion, plasma membrane	84.5	26.68
PGSC0003DMT400082009	Potato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	53.33	25.78
PGSC0003DMT400039392	Potato	plasma membrane	51.71	24.32
KRH13524	Soybean	cytosol	80.54	22.75
KRH21823	Soybean	cytosol	80.0	22.6
Bra027328.1-P	Field mustard	cytosol	78.38	22.19
AT3G14570.1	Thale cress	cytosol	78.02	21.91
CDX98473	Canola	cytosol	76.04	21.63
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane, plastid	76.04	21.4
TraesCS6D01G144200.1	Wheat	cytosol	73.33	20.88
TraesCS6A01G154400.1	Wheat	cytosol	73.15	20.83
TraesCS6B01G182300.1	Wheat	cytosol	72.97	20.68
KXG29910	Sorghum	cytosol	74.05	20.63
PGSC0003DMT400082011	Potato	mitochondrion	64.86	18.48
PGSC0003DMT400047243	Potato	cytosol	52.97	16.63
PGSC0003DMT400076360	Potato	plasma membrane	52.61	16.53
PGSC0003DMT400018166	Potato	cytosol	1.08	2.94
TraesCS6D01G406000.1	Wheat	cytosol	0.72	1.25
Zm00001d027474_P001	Maize	cytosol, peroxisome, plasma membrane	0.9	0.94
Os02t0247000-01	Rice	plasma membrane	0.36	0.68
PGSC0003DMT400018165	Potato	cytosol, peroxisome, plasma membrane	1.44	0.66
HORVU6Hr1G031230.34	Barley	plastid	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	EntrezGene:102604065	MapMan:21.7.1	GO:GO:0000148	GO:GO:0003674	GO:GO:0003824
GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	InterPro:Glyco_trans_48	UniProt:M1B0K8	PFAM:PF02364	EnsemblPlantsGene:PGSC0003DMG400013218	PGSC:PGSC0003DMG400013218
EnsemblPlants:PGSC0003DMT400034375	PANTHER:PTHR12741	PANTHER:PTHR12741:SF22	TMHMM:TMhelix	UniParc:UPI000294E2AB	RefSeq:XP_006368041.2
SEG:seg	:	:	:	:	:

Description

Transferase, transferring glycosyl groups [Source:PGSC_GENE;Acc:PGSC0003DMG400013218]

Coordinates

chr00:-:38862307..38866844

Molecular Weight (calculated)

64105.6 Da

IEP (calculated)

10.122

GRAVY (calculated)

0.251

Length

555 amino acids

Sequence
(BLAST)

001: MSYQETSFVT IGQRLLANPL RVRFHYGHPD VFDRVFHLTR GGISKASKTI NLSEDVFAGF NTTLRRGHVT YHEYMQVGKG RDVGLNQISK FEAKVANGNS
101: EQTISRDMYR LGHRFDFFRM LSCYFTTVGF YFNSLISVIT IYVFLYGQLY MVLSGLQRAL LVEAKLQNIK SLETALASQS FIQLGLLTGL PMIIELGLER
201: GYLNALKDFV LMQLQLAAVF FTFSYGTKSH YYGRTILHGG AKYRPTGRKV VVFHASFTEN YRLYSRSHFI KGFELLLLLI VYDLFRRSYE SNLAYVLTTY
301: AIWFMSFTWL FAPFLFNPSG FDWGKIVDDW KDWNKWINQQ GGIGIQQDKS WQSWWNDEQA HLRHAGLFSR LIEILLSLRF FLYQYGLVYH LDISNQSKNI
401: VVYVLSWVVI AFIFLLMKML NIGRRFLSAN HHLTFRLFKA CLFLGVVATI ITLSIICHLS VKDLIICCLA FLPTGWGLIL VGQVVRPKIE GTGLWHFTRV
501: FARAYDYGMG VVLFAPLASL AWLPIISAFQ TRFLFNEAFS RRLQIQPILA GKKKH

Best Arabidopsis Sequence Match ( AT1G05570.1 )
(BLAST)

0001: MAQRREPDPP PPQRRILRTQ TVGSLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALLN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL ETHNKVEEKT QIYVPYNILP LDPDSQNQAI
0201: MRLPEIQAAV AALRNTRGLP WTAGHKKKLD EDILDWLQSM FGFQKDNVLN QREHLILLLA NVHIRQFPKP DQQPKLDDRA LTIVMKKLFR NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYQ TISKEAKRSR
0401: GGKSKHSVWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLERS EIKSNSGDRW MGKVNFVEIR SFWHIFRSFD RLWSFYILCL QAMIVIAWNG
0501: SGELSAIFQG DVFLKVLSVF ITAAILKLAQ AVLDIALSWK ARHSMSLYVK LRYVMKVGAA AVWVVVMAVT YAYSWKNASG FSQTIKNWFG GHSHNSPSLF
0601: IVAILIYLSP NMLSALLFLF PFIRRYLERS DYKIMMLMMW WSQPRLYIGR GMHESALSLF KYTMFWIVLL ISKLAFSYYA EIKPLVGPTK DIMRIHISVY
0701: SWHEFFPHAK NNLGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSIPG AFNDCLVPQD NSDDTKKKRF RATFSRKFDQ
0801: LPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWSDPDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELKK RLAVDSYMTC AVRECYASFK
0901: NLINYLVVGE REGQVINDIF SKIDEHIEKE TLITELNLSA LPDLYGQFVR LIEYLLENRE EDKDQIVIVL LNMLELVTRD IMEEEVPSLL ETAHNGSYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMDMP PAPKIRNMLS FSVLTPYFSE DVLFSIFGLE
1101: QQNEDGVSIL FYLQKIFPDE WTNFLERVKC GNEEELRARE DLEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELLKGYK ALELTSEEAS
1201: KSGGSLWAQC QALADMKFTF VVSCQQYSIH KRSGDQRAKD ILRLMTTYPS IRVAYIDEVE QTHKESYKGT EEKIYYSALV KAAPQTKPMD SSESVQTLDQ
1301: LIYRIKLPGP AILGEGKPEN QNHAIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLEK HGGVRCPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDIFD RLFHLTRGGI CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSSQ RAFRNNKPLE AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIEFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGQSYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKELEHLR HSGVRGITLE IFLALRFFIF QYGLVYHLST FKGKNQSFWV YGASWFVILF
1801: ILLIVKGLGV GRRRFSTNFQ LLFRIIKGLV FLTFVAILIT FLALPLITIK DLFICMLAFM PTGWGMLLIA QACKPLIQQL GIWSSVRTLA RGYEIVMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS1Callose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AUE0]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.