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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016155_P001 Maize plastid 48.85 88.86
HORVU6Hr1G031200.8 Barley endoplasmic reticulum 51.36 84.27
TraesCS6A01G154400.1 Wheat cytosol 81.48 83.27
TraesCS6B01G182300.1 Wheat cytosol 81.73 83.15
TraesCS6D01G144200.1 Wheat cytosol 81.33 83.12
HORVU6Hr1G031230.34 Barley plastid 28.21 78.16
PGSC0003DMT400034375 Potato cytosol, mitochondrion, peroxisome, plasma membrane 20.63 74.05
Os02t0247000-01 Rice plasma membrane 10.04 68.03
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane, plastid 64.76 65.42
VIT_19s0138g00120.t01 Wine grape mitochondrion, plasma membrane 55.72 63.14
Solyc07g061920.2.1 Tomato cytosol 58.94 60.08
AT3G14570.1 Thale cress cytosol 57.68 58.15
KRH13524 Soybean cytosol 57.28 58.07
Bra027328.1-P Field mustard cytosol 57.08 58.01
KRH21823 Soybean cytosol 57.13 57.91
CDX98473 Canola cytosol 56.28 57.46
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 51.41 52.46
EER90434 Sorghum plastid 51.51 52.21
OQU75971 Sorghum cytosol 48.8 51.02
OQU93328 Sorghum mitochondrion 49.95 50.92
EES03079 Sorghum plasma membrane, plastid 47.69 49.12
OQU93478 Sorghum plasma membrane 7.28 48.49
EES03083 Sorghum cytosol 43.93 47.58
KXG33388 Sorghum mitochondrion 37.8 42.07
KXG33086 Sorghum cytosol 37.45 41.93
KXG40330 Sorghum cytosol 38.5 40.16
KXG40423 Sorghum mitochondrion 27.21 38.2
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1UniProt:A0A194YQ04InterPro:FKS1-like_dom1GO:GO:0000148
GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48InterPro:IPR023175EnsemblPlants:KXG29910
ProteinID:KXG29910ProteinID:KXG29910.1PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741
PANTHER:PTHR12741:SF22MetaCyc:PWY-6773SMART:SM01205EnsemblPlantsGene:SORBI_3004G107800SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI0007F1A041InterPro:VPS_Vta1/CALS_NSEG:seg:::
Description
hypothetical protein
Coordinates
chr4:+:10336381..10365808
Molecular Weight (calculated)
228918.0 Da
IEP (calculated)
9.008
GRAVY (calculated)
-0.032
Length
1992 amino acids
Sequence
(BLAST)
0001: MELEIVEVGP SSRPLRYVSR PLPPPPPPPP PPPPPQHHQQ QHGEAGDAHA AVPPVPQFDS EKIPQTLVSE IRPFLRAANQ IEAENPRVAY LCRFHAFEKA
0101: HTMDKLSAGR GVRQFKTALL QRLEQDESST KSKMTQRGDA REMKLFFEKK KQANAHELLP VLAEVLKALL SGTGLEGLVA SEDFADLFRY NILPLHPRLS
0201: QKPIMVLPEI KVAVSAVFSV RSLPPANMKD EKNHTDVLRW LQSWFGFQKG NVANQREHLI LLLANAHARL NPKSSSAQML DDRAVDELLA KTFENYLTWC
0301: KFLGRRSNIW LPSVKQEIQQ HKLLYIALYL LIWGEASNLR LMPECLCYIF HHMSYELYGV LSGAVSLITG EKVRPAYGGD DESFLNNVVK PIYNVIFQEA
0401: QKNKNGASDH STWRNYDDLN EFFWSADCFK LGWPMRLNND FFFTSSATKD SQVLCGSRLS SVPHGFENCA SCVPLVSQHA SQHNEQLNPQ LPHESSSTEN
0501: YLNAEAAEQR QQQATSSSSQ QRWLGKTNFV EVRSFWHLFR SFDRMWTLLV LGLQVLIIMA WHGLGSPTQL LDPIIFEDIL SIFITNAVLR VIQVILDIAF
0601: SWRTKGTMRV DQILRFTIKL SLAVAWAIIL PIFYANSQNY KACSTKRSKA FLGMFCLSKY MVVVALYLAS NVVGMALFFV PAVTNYIETS TWRICNVLSW
0701: WCQPQLYVGR GMQEGLVSIL KYTTFWMILL SCKFLFSYYF EIKPLVGPTK EIMKINVNKY EWHEFFPQVK SNAGAILAVW SPIILVYFMD TQIWYSVFCT
0801: IFGGMCGIIH HLGEIRTMGM VRSRFCSLPE AFNMSLDPPT MPIERKGMPF SFLEKKIFKK LGKAERHDPT KFALVWSQII SSFRSEDLIS NREMDLMTMP
0901: VSLVHSSGSI RWPLFLLAKK FSEAVDMAAN FTGKSAQLFR KIKKDHYMFC SINDFYELTK NIFRFLIIGE TERRVVAAIF DEINKSIQNS SLVTDFRLDQ
1001: LPSLFCKFDR LAELLFINKQ EHRYEVTILL QDIVDILLQD MIVDPQSILD VVNSSERLIS DDYGAFNYYE PELFASVSSI TSIRYPYPDQ QKEQVKRLYL
1101: LLSTKEKAAE IPSNLEARRR ISFFATSLFM DMPAAPKVRS MLSFSVITPY FMEEVKFSDE ELHSNQDEAS ILSYMQKIYP DQWKNFLERL GSKVTNDEIR
1201: CWASFRGQTL SRTVRGMMYY RKALKVQALL DRTNDQDLFE ALMATEQGKN KRNIQTLSAE LEALADMKFS YVISCQKFGE QKIKGDPHAQ DIIDLMMRYP
1301: ALRVAYIEEK EVIVNNCSHT IEGKEVIVNN CPHKVYSSVL IKAENNLDQE IYRIKLPGPP IIGEGKPENQ NHAIIFTRGE ALQTIDMNQD NYLEEAYKMR
1401: NVLQEFVRRP RDQSPTILGL REHIFTGSVS SLAGFMSYQE TSFVTIGQRF LAEPLRVRFH YGHPDIFDRI FHLTRGGISK ASKTINLSED VFAGYNSILR
1501: RGNIIYNEYI QVGKGRDVGL NQISKFEAKV ANGNSEQTIS RDIHRLGRRF DFFRMLSCYF TTVGFYFNSL ISVVGVYVFL YGQLYLVLSG LQRALLLEAQ
1601: TQNIKSLETA LASQSFLQLG LLTGLPMVME LGLEKGFRAA LSDFILMQLQ LASVFFTFSL GTKAHYYGRT ILHGGAKYRP TGRKFVVFHA SFTENYQLYS
1701: RSHFVKGFEL IFLLIVYHIF RRSHVSNVVH VMITYSTWFM AVAWLFTPFL FNPAGFAWQK IVDDWADWNR WMKNQGGIGV QPEKSWESWW NGENAHLRHS
1801: VLSSRILEVL LSLRFFIYQY GLVYHLNISQ DNKNFLVYLL SWVVIIAIIG FVKLVNCASR RLSTKHQLIF RFIKLLTFLS VVTSLILLYC LCQLSIMDLI
1901: ICCLAFIPTG WGLLLIVQVL RPKIEYYAIW EPIQVIAHAY DYGMGSLLFF PIAVLAWMPV ISAIQTRVLF NRAFSRQLQI QPFIDVGKTK RR
Best Arabidopsis Sequence Match ( AT3G14570.1 )
(BLAST)
0001: MSHEIVPVDP IDVPSTSYSR PILGPREDSP ERATEFTRSL TFREHVSSEP FDSERLPATL ASEIQRFLRI ANLVESEEPR IAYLCRFHAF EIAHHMDRNS
0101: TGRGVRQFKT SLLQRLELDE EFTVRRRKEK SDVRELKRVY HAYKEYIIRH GAAFNLDNSQ REKLINARRI ASVLYEVLKT VTSGAGPQAI ADRESIRAKS
0201: EFYVPYNILP LDKGGVHQAI MHLPEIKAAV AIVRNTRGLP PPEEFQRHQP FLDLFEFLQY AFGFQNGNVA NQREHLILLL SNTIIRQPQK QSSAPKSGDE
0301: AVDALMKKFF KNYTNWCKFL GRKNNIRLPY VKQEALQYKT LYIGLYLLIW GEASNLRFMP ECLCYIFHHM AYELHGVLTG AVSMITGEKV APAYGGGHES
0401: FLADVVTPIY MVVQKEAEKN KNGTADHSMW RNYDDLNEFF WSLECFEIGW PMRPEHDFFC VESSETSKPG RWRGMLRFRK QTKKTDEEIE DDEELGVLSE
0501: EQPKPTSRWL GKTNFVETRS FWQIFRSFDR MWSFFVLSLQ ALIIMACHDV GSPLQVFNAN IFEDVMSIFI TSAILKLIKG ILDIIFKWKA RNTMPINEKK
0601: KRLVKLGFAA MWTIILPVLY SHSRRKYICY FTNYKTWLGE WCFSPYMVAV TIYLTGSAIE LVLFFVPAIS KYIETSNHGI FKTLSWWGQP RLYVGRGMQE
0701: TQVSQFKYTF FWILVLLTKF AFSYAFEIKP LIEPTRLIMK VGVRNYEWHE IFPEVKSNAA AIVAVWAPIM VVYFMDTQIW YSVYCTIFGG LYGVLHHLGE
0801: IRTLGMLRGR FHTLPSAFNA SLIPHSTKDE KRRKQRGFFP FNLGRGSDGQ KNSMAKFVLV WNQVINSFRT EDLISNKELD LMTMPLSSEV LSGIIRWPIF
0901: LLANKFSTAL SIAKDFVGKD EVLYRRIRKD EYMYYAVKEC YESLKYILQI LVVGDLEKKI ISGIINEIEE SIRQSSLLEE FKMAELPALH DKCIELVQLL
1001: VEGSAEQLQV EKSEELHGKL VKALQDIFEL VTNDMMVHGD RILDLLQSRE GSGEDTGIFM RVIEPQLFES YGEWRCIHFP LPDSASLSEQ IQRFLLLLTV
1101: KDSAMDIPEN LDARRRLSFF ATSLFMDMPD APKVRNMMSF SVLTPHYQED INYSTNELHS TKSSVSIIFY MQKIFPDEWK NFLERMGCDN LDALKKEGKE
1201: EELRNWASFR GQTLSRTVRG MMYCREALKL QAFLDMADDE DILEGYKDVE RSNRPLAAQL DALADMKFTY VVSCQMFGAQ KSSGDPHAQD ILDLMIKYPS
1301: LRVAYVEERE EIVLDVPKKV YYSILVKAVN GFDQEIYRVK LPGPPNIGEG KPENQNHAIV FTRGEALQTI DMNQDHYLEE AFKMRNLLQE FLRNRGRRPP
1401: TILGLREHIF TGSVSSLAWF MSYQETSFVT IGQRLLANPL RVRFHYGHPD VFDRIFHITR GGISKSSRTI NLSEDVFAGY NTTLRRGCIT YNEYLQVGKG
1501: RDVGLNQISK FEAKVANGNS EQTISRDIYR LGQRFDFFRM LSCYFTTIGF YFSSLISVIG IYIYLYGQLY LVLSGLQKTL ILEAKVKNIK SLETALASQS
1601: FIQLGLLTGL PMVMEIGLEK GFLIAFQDFI LMQLQLAAFF FTFSLGTKTH YFGRTILHGG AKYRPTGRKV VVFHANFSEN YRLYSRSHFI KGFELMILLV
1701: VYELFKHTSQ SNMAYSFITF SVWFMSFTWL CAPFLFNPSG FTWEIIVGDW RDWNRWIKEQ GGIGIQQDKS WQSWWNDEQA HLRGSGVGAR CLEIILSLRF
1801: FVYQYGLVYH LDITQSNTNI IVYALSWVVI LATFFTVKAV DLGRQLFSTR KHLVFRFFKV FVFVSILTII ITLANICHLS VKDLLVSCLA FLPTGWGLIL
1901: IAQAVRPKIE GTSLWEFTQV LARAYDYGMG VVLFAPMAIL AWLPIISAFQ TRFLFNEAFN RRLQIQPILA GKKKNR
Arabidopsis Description
CALS8Putative callose synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUD7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.