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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d044566_P006 Maize cytosol 93.91 90.8
Os01t0533500-01 Rice plasma membrane 26.64 87.5
TraesCS3A01G197600.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 30.4 85.74
HORVU3Hr1G058470.35 Barley mitochondrion 84.34 82.28
TraesCS3B01G230100.1 Wheat mitochondrion 84.34 81.76
TraesCS5D01G111000.2 Wheat mitochondrion 84.07 81.58
TraesCS3A01G197500.1 Wheat mitochondrion 15.12 63.04
GSMUA_Achr1P05550_001 Banana endoplasmic reticulum, golgi, plasma membrane 44.05 62.89
CDY10204 Canola plasma membrane 9.73 62.59
VIT_12s0028g00400.t01 Wine grape plasma membrane 56.55 60.08
OQU93478 Sorghum plasma membrane 9.62 59.2
EES03079 Sorghum plasma membrane, plastid 61.72 58.69
Solyc07g056260.2.1 Tomato cytosol, plastid 58.02 55.83
Bra015504.1-P Field mustard cytosol 56.88 54.45
CDY06644 Canola cytosol 56.88 54.45
AT3G59100.1 Thale cress cytosol 56.72 54.29
AT1G06490.1 Thale cress cytosol 57.2 53.73
CDX67777 Canola cytosol 56.01 53.17
CDY10203 Canola plasma membrane 44.15 51.75
Bra032416.1-P Field mustard cytosol 56.34 50.24
OQU75971 Sorghum cytosol 51.82 50.03
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 52.96 49.9
CDY06215 Canola cytosol 56.44 49.81
EER90434 Sorghum plastid 52.96 49.57
CDY09971 Canola cytosol 56.77 49.25
OQU93328 Sorghum mitochondrion 51.93 48.87
Bra003364.1-P Field mustard cytosol, golgi, plasma membrane 55.79 45.36
KXG29910 Sorghum cytosol 47.58 43.93
CDX98348 Canola cytosol, golgi, plasma membrane 54.49 43.51
KRH25579 Soybean golgi, mitochondrion, plasma membrane 8.1 43.44
KXG33388 Sorghum mitochondrion 41.87 43.02
KXG33086 Sorghum cytosol 41.54 42.95
KXG40330 Sorghum cytosol 43.34 41.73
KXG40423 Sorghum mitochondrion 28.93 37.49
KRH25578 Soybean mitochondrion 9.24 35.2
CDY47126 Canola plasma membrane 3.21 31.22
Protein Annotations
KEGG:00500+2.4.1.34MapMan:21.7.1UniProt:C5XMA1EnsemblPlants:EES03083ProteinID:EES03083ProteinID:EES03083.3
InterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48
PFAM:PF02364PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF13MetaCyc:PWY-6773SMART:SM01205
EnsemblPlantsGene:SORBI_3003G180100TMHMM:TMhelixUniParc:UPI0009DC8530SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:46940015..46957277
Molecular Weight (calculated)
212633.0 Da
IEP (calculated)
8.554
GRAVY (calculated)
-0.018
Length
1839 amino acids
Sequence
(BLAST)
0001: MKLDYQGRKY AFKKVQTVDP SSTQRGVRQF KTYMSIKLDQ DDTQVLGNDA NEIQQFYKKY CASMRHISEQ RNFEEMARYY QVAYALYEVL RDVTNNKVDP
0101: QVMRCAEMVE ENGRHFKNYK YNIIPFNFPG SSEAIVELPE IRGAMDAISD IDGLPMPHMY SIQSQGGQSI RDVLDWLSLA FGFQKSNVEN QRENMVLLLA
0201: NISTRTAGQE GHPLVDTVNE LWKKIFGNYK SWCYYLHISS SIMISHDVTE HKKQQLKLLH IGLYLLIWGE ASNVRFMPEC LCYIFHHMAK QLHDMVDENY
0301: FQPPPGFEEE GSFLKNVVEP IFKVLQKEAH KGRGGTVGHS AWRNYDDLNE IFWSKKCFTK LKWPWDLSSD FFYQGRSTAR KPKTNFVEVR TFLHIFRSFN
0401: RMWMFFILAF QAMLIVSWSS SGSLSGITDG TVFRNVLSVF ITAALLNFIT VTLDIMFTVQ AWGSMEWTKI ARYLLKFVVA IAWIIILPLT YSSSIKYPSG
0501: AGKILNSWIG NWYNESVYNI AIVIYMVPDI LAALFFLLPQ LQNVMERSNS RVLVLLMWWI QPRLYVGRGM HEDILSILKY VFFWAVLLIS KLAFSFYVEI
0601: SPLIDPTKFI LDQQVGNYEW HQIFPFLPRN LGVVITIWAP IVMVYFMDTQ IWYAIFSTVF GGVSGALSHV GEIRTLGMLR ARFKSIPEAF SKCNATKQRE
0701: QAFEHRSFFC VWNSFINSLR EEDFISDREK DMLIAPSYSS NLSIIQWPPF LLASKVPAAV HMAMNSKEGD EHELIEKVKL DRDRYNAVIE CYESLMIILN
0801: SLLLDSNDQN IVNDIDRKVT YSMRNKTFLE DFEMAEIGKV SATLAKLLQL LKSEPINDVE ERKIVNALQD FMEITTRDFM KDGQSILKDE NERKQRFMNL
0901: NINMIKEDSW REKFVRLHLL LTMKDSAMDV PTNLDARRRI TFFANSLFMK MPRAPCVHDM ISFSVLTPYY NEEVLYSSHE LNRKNEDGIS ILFYLQKIYP
1001: DEWKNFLERI GVEPDNEVSI KGHMDDIRLW ASYRGQTLAR TVRGMMYYRR ALELQCYEDM INDQGYGLAD LDRAKAVRSK AIADIKFTYV VSCQLYGVHK
1101: ASKDSREKGL YENILNLMLT YPALRIAYID EKEVQLQNGK IEKQYYSVLV KGDDEEIYRI RLPGKPTEVG EGKPNNQNHA IIFTRGEALQ AIDMNQDNYL
1201: EEAFKMRNLL EEFLLTHGKS EPTILGVREH IFTGSVSSLA WFMSSQETSF VTIGQRVLAN PLKVRFHYGH PDVFDRLFHL TRGGISKASK VINLSEDIFA
1301: GFNSTLRQGN VTHHEYIQLG KGRDVGMNQI SNFEAKVANG NGEQTLCRDI YRLGHRFDFY RMLSLYFTTV GFYFNSMVAV LTVYVFLYGR LYLVLSGLEK
1401: SILQDPNIQN IKPFENALAT QSVFQLGMLL VLPMMMEVGL EKGFGRALAE FVIMQLQLAP VFFTFHLGTK THYYGRTILH GGAKYRATGR GFVVRHAKFA
1501: ENYRMYSRSH FVKALELLIL LVVYLAYGSS YRSSSLYLYV TVSIWFLVFC WLFAPFIFNP SCFEWHKTVD DWIDWWKWMG NRGGIGLAPE QSWEAWWVSE
1601: HDHLRNATIR SLLLEFILSL RFLIYQYGIV YHLHIVHGNK SFLVYALSWL VIAVALVSLK VVSLGREKFV TRFQLVFRIL KGIVFLVLIG LLVLLFVGFD
1701: LAVADVGASI LAFIPTGWFI LLIAQLCGPL FRRLIIEPLH LLCCPYGTGG ACRGPCCAKF RQRTGAALRK MGPWDSIQEM ARMYEYTMGL LIFLPIAVLS
1801: WFPFVSEFQT RLLFNQAFSR GLQISRILAG QNGSGTRSD
Best Arabidopsis Sequence Match ( AT1G06490.1 )
(BLAST)
0001: MASTSSGGRG EDGRPPQMQP VRSMSRKMTR AGTMMIEHPN EDERPIDSEL VPSSLASIAP ILRVANDIDQ DNARVAYLCR FHAFEKAHRM DPTSSGRGVR
0101: QFKTYLLHKL EEEEEITEHM LAKSDPREIQ LYYQTFYENN IQDGEGKKTP EEMAKLYQIA TVLYDVLKTV VPQARIDDKT LRYAKEVERK KEQYEHYNIL
0201: PLYALGAKTA VMELPEIKAA ILAVCNVDNL PRPRFHSASA NLDEVDRERG RSFNDILEWL ALVFGFQRGN VANQREHLIL LLANIDVRKR DLENYVEIKP
0301: STVRKLMEKY FKNYNSWCKY LRCDSYLRFP AGCDKQQLSL LYIGLYLLIW GEASNVRFMP ECLCYIFHNM ANEVHGILFG NVYPVTGDTY EAGAPDEEAF
0401: LRNVITPIYQ VLRKEVRRNK NGKASHSKWR NYDDLNEYFW DKRCFRLKWP MNFKADFFIH TDEISQVPNQ RHDQVSHGKR KPKTNFVEAR TFWNLYRSFD
0501: RMWMFLVLSL QTMIIVAWHP SGSILAIFTE DVFRNVLTIF ITSAFLNLLQ ATLDLVLSFG AWKSLKFSQI MRYITKFLMA AMWAIMLPIT YSKSVQNPTG
0601: LIKFFSSWVG SWLHRSLYDY AIALYVLPNI LAAVFFLLPP LRRIMERSNM RIVTLIMWWA QPKLYIGRGM HEEMFALFKY TFFWVMLLLS KLAFSYYVEI
0701: LPLVNPTKLI WDMHVVNYEW HEFFPNATHN IGVIIAIWGP IVLVYFMDTQ IWYAIFSTLF GGIYGAFSHL GEIRTLGMLR SRFKVVPSAF CSKLTPLPLG
0801: HAKRKHLDET VDEKDIARFS QMWNKFIHTM RDEDLISDRE RDLLLVPSSS GDVTVVQWPP FLLASKIPIA LDMAKDFKGK EDVDLFKKIK SEYYMHYAVV
0901: EAYETVRDII YGLLQDESDK RIVREICYEV DISIQQHRFL SEFRMTGMPL LSDKLEKFLK ILLSDYEEDD YKSQIINVLQ DIIEIITQDV MVNGHEILER
1001: AHLQSGDIES DKKEQRFEKI DLSLTQNISW REKVVRLLLL LTVKESAINI PQSLEARRRM TFFANSLFMN MPDAPRVRDM LSFSVLTPYY KEDVLYSEEE
1101: LNKENEDGIT ILFYLQRIYP EEWSNYCERV NDLKRNLSEK DKAEQLRQWV SYRGQTLSRT VRGMMYYRVA LELQCFQEYT EENATNGGYL PSESNEDDRK
1201: AFSDRARALA DLKFTYVVSC QVYGNQKKSS ESRDRSCYNN ILQLMLKYPS LRVAYIDERE ETVNGKSQKV FYSVLLKGCD KLDEEIYRIK LPGPPTEIGE
1301: GKPENQNHAI IFTRGEALQT IDMNQDNYFE ECFKMRNVLQ EFDEGRRGKR NPTILGLREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAN PLRVRFHYGH
1401: PDIFDRIFHI TRGGISKASK IINLSEDIFA GYNSTLRGGY VTHHEYIQAG KGRDVGMNQI SFFEAKVANG NGEQTLSRDV YRLGRRFDFY RMLSFYFTTV
1501: GFYFSSMITV LTVYVFLYGR LYLVLSGLEK NILQSASVHE SNALEQALAA QSVFQLGFLM VLPMVMEIGL EKGFRTALGD FIIMQLQLAS VFFTFQLGTK
1601: AHYFGRTILH GGSKYRATGR GFVVFHAKFA ENYRLYSRSH FVKGLELVIL LVVYQVYGTS YRSSSTYMYI TFSMWFLVTS WLFAPFIFNP SGFEWQKTVD
1701: DWTDWKRWMG NRGGIGIVLD KSWESWWDIE QEHLKHTNLR GRVLEILLAL RFLLYQYGIV YHLNIARRHT TFLVYGLSWA ILLSVLLVLK MVSMGRRKFG
1801: TDFQVMFRIL KALLFLGFLS VMTVLFVVCG LTISDLFASI LAFLPTGWAI LLIGQALRSV FKGLGFWDSV KELGRAYEYI MGLVIFTPIA VLSWFPFVSE
1901: FQTRLLFNQA FSRGLQISMI LAGKKDKETP STKYLGHTEE SFGLEHDTNT FNHYYLWT
Arabidopsis Description
CALS7Callose synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.