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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 4
  • extracellular 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0533000-00 Rice cytosol, plasma membrane 27.0 79.75
VIT_12s0028g00400.t01 Wine grape plasma membrane 67.66 74.7
HORVU3Hr1G042540.3 Barley cytosol, mitochondrion 22.19 74.65
AT3G59100.1 Thale cress cytosol 71.38 71.0
Bra015504.1-P Field mustard cytosol 71.32 70.95
AT1G06490.1 Thale cress cytosol 72.37 70.63
GSMUA_Achr1P05550_001 Banana endoplasmic reticulum, golgi, plasma membrane 47.31 70.19
Bra032416.1-P Field mustard cytosol 69.23 64.16
Os01t0533500-01 Rice plasma membrane 18.52 63.21
TraesCS3D01G201500.1 Wheat cytosol 63.42 63.09
TraesCS3A01G202000.1 Wheat cytosol 63.37 63.04
TraesCS3A01G197600.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 21.51 63.04
TraesCS3B01G229700.1 Wheat cytosol, plastid 63.16 62.83
EES03079 Sorghum plasma membrane, plastid 63.53 62.77
Zm00001d044584_P006 Maize plastid 63.21 62.66
TraesCSU01G021500.1 Wheat plastid 62.38 60.97
TraesCS2D01G600000.1 Wheat plastid 62.32 60.86
TraesCS2A01G586600.1 Wheat plastid 62.01 60.55
HORVU2Hr1G118600.49 Barley mitochondrion 59.71 59.77
Bra003364.1-P Field mustard cytosol, golgi, plasma membrane 70.38 59.46
TraesCS6B01G001900.1 Wheat cytosol 53.53 59.34
HORVU3Hr1G058470.35 Barley mitochondrion 57.88 58.67
TraesCS5D01G111000.2 Wheat mitochondrion 57.56 58.05
EES03083 Sorghum cytosol 55.83 58.02
TraesCS3B01G230100.1 Wheat mitochondrion 57.51 57.93
HORVU3Hr1G042600.9 Barley cytosol, plastid 41.39 57.15
Solyc01g073750.2.1 Tomato nucleus 53.69 57.06
Zm00001d044566_P006 Maize cytosol 56.67 56.94
Solyc01g006370.2.1 Tomato nucleus 57.88 56.78
Solyc11g005980.1.1 Tomato cytosol, plastid 55.42 54.84
TraesCS6B01G002100.1 Wheat cytosol 49.29 53.95
Os01t0533100-00 Rice mitochondrion, plastid 12.77 52.59
Solyc03g111570.2.1 Tomato nucleus, plastid 30.25 51.7
Solyc01g006350.2.1 Tomato endoplasmic reticulum, nucleus 30.3 51.56
Solyc07g061920.2.1 Tomato cytosol 51.7 50.56
KRH08806 Soybean extracellular 1.57 49.18
TraesCS3A01G197500.1 Wheat mitochondrion 10.88 47.17
Solyc07g053980.2.1 Tomato nucleus 41.03 44.93
Solyc02g078230.1.1 Tomato cytosol 40.92 43.81
Zm00001d030559_P001 Maize mitochondrion 13.29 34.23
Solyc01g006360.2.1 Tomato nucleus 12.98 32.5
Solyc03g111560.2.1 Tomato nucleus 13.92 32.48
Zm00001d028611_P001 Maize plastid 4.87 31.42
CDY47126 Canola plasma membrane 3.09 31.22
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1ncoils:CoilInterPro:FKS1-like_dom1GO:GO:0000148
GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48InterPro:IPR023175UniProt:K4CGF9
PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF16SMART:SM01205
EnsemblPlantsGene:Solyc07g056260.2EnsemblPlants:Solyc07g056260.2.1TMHMM:TMhelixUniParc:UPI000276B063InterPro:VPS_Vta1/CALS_NSEG:seg
Description
No Description!
Coordinates
chr7:-:64090068..64115779
Molecular Weight (calculated)
222203.0 Da
IEP (calculated)
8.935
GRAVY (calculated)
-0.150
Length
1911 amino acids
Sequence
(BLAST)
0001: MASTSGTKAE GGVGPPRTAS RRVSKAPTMV DPAAGEDQNS LDSELVPSSL ASIAPILRVA NEVEKQNPRV AYLCRFHAFE KAHRMDPTSS GRGVRQFKTY
0101: LLHRLEREEE ETQPQLARSD PREIQKFYQN FYEENIRDGH QTKKPEEMAK IYQIASVLYD VLRTVVPSSK VEDETKRYAK DVEEKRDYYE HYNILPIYAA
0201: GVKPAIMELP EIKASLRAIR NMDNLPVLRM PDDKDKSVND ILEWLASAFG FQKANVANQR EHLILLLANM DIRNKSVDDD ANYNELDTYT VKQLKDKIFK
0301: NYESWYKYLH CPTNLRFPPG CDKQQLELLY IGLYLLIWGE ASNIRFMPEC LCYIFHNMAH EMHGILFGNV LPVSGGAYQP VSHGEESFLR DVVTPIYQVI
0401: QKESSRNLNG TASHSSWRNY DDLNEYFWSD KCFKLGWPMD KKADFFVHSD KRNTANVGHN NVATGRRKPK ANFVENRTFW HLYRSFDRMW IFFILALQAM
0501: VIIAWNQSGS LSVIFDADVF KSVLSIFITA AILNALRATL DIVLSLRAWR SLKITQILRY LLKFAFAAFW VVVMPVAYAK SVQDPGGVLR FFSNLGGYIE
0601: NESLYYYCVA IYLIPEILAA FIFFFPFLRK SMERSNWRII SLLMWWAQPK LYVGRGMHED MFSLLKYTLF WIMLLISKLS FSYYVEILPL VQPTRTIMDI
0701: RITSYDWHEF FPHMPHNIGV VIVLWAPVLL VYFMDTQIWY AIFSTIVGGI YGAFSHLGEI RTLGMLRSRF ESIPSAFSER LVPSSKKEKK HRYEDDSLER
0801: KNIAKFSQMW NEFILSLRME DLISHKERDL LLVPYSSSEV SVIQWPPFLL ASKIPIALDM AKDFRGKEDA DLFRKIKSDD FMRSAVIECY ETLRYLLVGI
0901: LEDKDDKMVV EQIRKEIDES IKEKRFLRKF RMSGLPLLND KLERFLNLLV ADYEEEEAKR SPMINLIQDI MEIIIQDVMF DGHEILERAH QIDRKEQRFE
1001: RINIYLTQNR SWKEKVIRLN LLLTVKESAI NVPTNLDARR RITFFANSLF MKMPDAPRVR NMLSFSVLTP YYNEDVLYSD EELNKENEDG ITTLFYLQKI
1101: YPDQWKNFED RINDPKLKDI SKDKNELIRY WVSYRGQTLA RTVRGMMYYR EALELQYFLD FAEDKAIFGG YRIIDMNRTD YRALKERAQA LADLKFTYVV
1201: SCQIYGAQKK SSEQRDRSCY VNILNLMLTY PSLRVAYIDE RDEAINGKSE KVYYSVLVKG GDKLDEEIYR IKLPGPPKIG EGKPENQNHA IIFTRGEALQ
1301: TIDMNQDNYF EEAFKMRNVL EEFLKPHRKR RPTILGLREH IFTGSVSSLA WFMSNQETSF VTIGQRILAN PLRVRFHYGH PDIFDRIFHV TRGGISKASK
1401: TINLSEDIFS GYNSTLRGGF VTHHEYIQVG KGRDVGMNQI SQFEAKVANG NGEQTLSRDV YRLGRRFDFY RMLSFYFTTV GFYFSSMATV LTVYVFLYGR
1501: LYMVLSGLEK RILEDPTVRQ SKALEEAMAP SSISQLGLLL VLPMVMEIGL ERGFRTALGD FVIMQLQLAS VFFTFQLGTK AHYYGRTILH GGSKYRATGR
1601: GFVVFHAKYA DNYRMYSRSH FVKGLELFML LIVYEVYGES YRESQLYLFV TISIWFLVGS WLFAPFVFNP SGFDWQKTVD DWTDWKRWMG NRGGIGISPD
1701: KSWESWWNGE QEHLKHTNLR GRVIDIILAF RFFIFQYGIV YHLDIAHGSR NLLVYGLSWF VMLTALLVLK MVSMGRRRFG TDFQLMFRIL KALLFLGFVS
1801: VMTVLFVVCG LTMSDLFAAI LAFVPTGWGI LLIGQACRPC FKGLGIWDSV MELARAYECI MGLFIFAPVV VLSWFPFVSE FQTRLLFNQA FSRGLQISMI
1901: LAGKKDESSH S
Best Arabidopsis Sequence Match ( AT1G06490.2 )
(BLAST)
0001: MASTSSGGRG EDGRPPQMQP VRSMSRKMTR AGTMMIEHPN EDERPIDSEL VPSSLASIAP ILRVANDIDQ DNARVAYLCR FHAFEKAHRM DPTSSGRGVR
0101: QFKTYLLHKL EEEEEITEHM LAKSDPREIQ LYYQTFYENN IQDGEGKKTP EEMAKLYQIA TVLYDVLKTV VPQARIDDKT LRYAKEVERK KEQYEHYNIL
0201: PLYALGAKTA VMELPEIKAA ILAVCNVDNL PRPRFHSASA NLDEVDRERG RSFNDILEWL ALVFGFQRGN VANQREHLIL LLANIDVRKR DLENYVEIKP
0301: STVRKLMEKY FKNYNSWCKY LRCDSYLRFP AGCDKQQLSL LYIGLYLLIW GEASNVRFMP ECLCYIFHNM ANEVHGILFG NVYPVTGDTY EAGAPDEEAF
0401: LRNVITPIYQ VLRKEVRRNK NGKASHSKWR NYDDLNEYFW DKRCFRLKWP MNFKADFFIH TDEISQVPNQ RHDQVSHGKR KPKTNFVEAR TFWNLYRSFD
0501: RMWMFLVLSL QTMIIVAWHP SGSILAIFTE DVFRNVLTIF ITSAFLNLLQ ATLDLVLSFG AWKSLKFSQI MRYITKFLMA AMWAIMLPIT YSKSVQNPTG
0601: LIKFFSSWVG SWLHRSLYDY AIALYVLPNI LAAVFFLLPP LRRIMERSNM RIVTLIMWWA QPKLYIGRGM HEEMFALFKY TFFWVMLLLS KLAFSYYVEI
0701: LPLVNPTKLI WDMHVVNYEW HEFFPNATHN IGVIIAIWGP IVLVYFMDTQ IWYAIFSTLF GGIYGAFSHL GEIRTLGMLR SRFKVVPSAF CSKLTPLPLG
0801: HAKRKHLDET VDEKDIARFS QMWNKFIHTM RDEDLISDRE RDLLLVPSSS GDVTVVQWPP FLLASKIPIA LDMAKDFKGK EDVDLFKKIK SEYYMHYAVV
0901: EAYETVRDII YGLLQDESDK RIVREICYEV DISIQQHRFL SEFRMTGMPL LSDKLEKFLK ILLSDYEEDD YKSQIINVLQ DIIEIITQDV MVNGHEILER
1001: AHLQSGDIES DKKEQRFEKI DLSLTQNISW REKVVRLLLL LTVKESAINI PQSLEARRRM TFFANSLFMN MPDAPRVRDM LSFSVLTPYY KEDVLYSEEE
1101: LNKENEDGIT ILFYLQRIYP EEWSNYCERV NDLKRNLSEK DKAEQLRQWV SYRGQTLSRT VRGMMYYRVA LELQCFQEYT EENATNGGYL PSESNEDDRK
1201: AFSDRARALA DLKFTYVVSC QVYGNQKKSS ESRDRSCYNN ILQLMLKYPS LRVAYIDERE ETVNGKSQKV FYSVLLKGCD KLDEEIYRIK LPGPPTEIGE
1301: GKPENQNHAI IFTRGEALQT IDMNQDNYFE ECFKMRNVLQ EFDEGRRGKR NPTILGLREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAN PLRVRFHYGH
1401: PDIFDRIFHI TRGGISKASK IINLSEDIFA GYNSTLRGGY VTHHEYIQAG KGRDVGMNQI SFFEAKVANG NGEQTLSRDV YRLGRRFDFY RMLSFYFTTV
1501: GFYFSSMITV LTVYVFLYGR LYLVLSGLEK NILQSASVHE SNALEQALAA QSVFQLGFLM VLPMVMEIGL EKGFRTALGD FIIMQLQLAS VFFTFQLGTK
1601: AHYFGRTILH GGSKYRATGR GFVVFHAKFA ENYRLYSRSH FVKGLELVIL LVVYQVYGTS YRSSSTYMYI TFSMWFLVTS WLFAPFIFNP SGFEWQKTVD
1701: DWTDWKRWMG NRGGIGIVLD KSWESWWDIE QEHLKHTNLR GRVLEILLAL RFLLYQYGIV YHLNIARRHT TFLVYGLSWA ILLSVLLVLK MVSMGRRKFG
1801: TDFQVMFRIL KALLFLGFLS VMTVLFVVCG LTISDLFASI LAFLPTGWAI LLIGQALRSV FKGLGFWDSV KELGRAYEYI MGLVIFTPIA VLSWFPFVSE
1901: FQTRLLFNQA FSRGLQISMI LAGKKDKETP STK
Arabidopsis Description
CALS7Callose synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.