Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g10020.t01 | Wine grape | cytosol | 26.37 | 74.74 |
| KRH63709 | Soybean | cytosol | 27.96 | 74.35 |
| GSMUA_Achr2P04770_001 | Banana | mitochondrion, plasma membrane | 63.37 | 63.14 |
| Os06t0113150-00 | Rice | mitochondrion | 35.78 | 59.92 |
| Solyc01g006360.2.1 | Tomato | nucleus | 48.23 | 51.77 |
| Zm00001d035842_P001 | Maize | cytosol | 21.98 | 31.75 |
| AT2G36850.1 | Thale cress | mitochondrion | 72.41 | 31.14 |
| Bra005239.1-P | Field mustard | cytosol, mitochondrion | 72.53 | 31.12 |
| CDX75010 | Canola | cytosol, mitochondrion | 72.53 | 31.12 |
| CDY33198 | Canola | cytosol, mitochondrion | 71.31 | 30.87 |
| TraesCS4A01G459300.1 | Wheat | golgi | 64.22 | 27.48 |
| TraesCS7D01G026700.1 | Wheat | mitochondrion | 64.1 | 27.4 |
| TraesCS7A01G030500.1 | Wheat | golgi | 64.1 | 27.4 |
| HORVU7Hr1G003460.9 | Barley | plastid | 63.13 | 27.1 |
| Zm00001d030266_P001 | Maize | cytosol | 62.76 | 26.8 |
| VIT_17s0000g10010.t01 | Wine grape | cytosol | 49.94 | 24.92 |
| KRH54243 | Soybean | endoplasmic reticulum | 46.76 | 23.83 |
| KRH63708 | Soybean | endoplasmic reticulum | 45.54 | 23.44 |
| Solyc01g073750.2.1 | Tomato | nucleus | 34.19 | 15.57 |
| Solyc01g006370.2.1 | Tomato | nucleus | 35.04 | 14.73 |
| Solyc11g005980.1.1 | Tomato | cytosol, plastid | 34.43 | 14.6 |
| Solyc07g056260.2.1 | Tomato | cytosol, plastid | 32.48 | 13.92 |
| Solyc07g061920.2.1 | Tomato | cytosol | 30.89 | 12.95 |
| Solyc02g078230.1.1 | Tomato | cytosol | 26.98 | 12.38 |
| Solyc07g053980.2.1 | Tomato | nucleus | 25.27 | 11.86 |
| PGSC0003DMT400039392 | Potato | plasma membrane | 9.04 | 6.27 |
| GSMUA_Achr2P04760_001 | Banana | plasma membrane | 4.15 | 2.91 |
| Solyc03g111570.2.1 | Tomato | nucleus, plastid | 1.59 | 1.16 |
| Solyc01g006350.2.1 | Tomato | endoplasmic reticulum, nucleus | 1.34 | 0.98 |
| Os06t0112800-01 | Rice | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc03g111560.2.1 | EnsemblPlantsGene:Solyc03g111560.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:FKS1-like_dom1 |
| KEGG:00500+2.4.1.34 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF43 | PFAM:PF14288 | SMART:SM01205 | TMHMM:TMhelix |
| UniParc:UPI0002768F0F | UniProt:K4BK19 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3:+:62156251..62187104
Molecular Weight (calculated)
94440.6 Da
IEP (calculated)
9.567
GRAVY (calculated)
-0.117
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVYENWDR LVRATLRREQ LRQTGPGHGR TPSGIAGSVP DSLQRTTNIN AILQAADEIQ DEDPNVARIL CEQAYSMAQN LDPNSDGRGV LQFKTGLMSV
101: IKQKLAKKEG TRIDRNRDIE RLWEFYQQYK RRHKVDDIQR EEQKWRESGA VSANIGELGL RFFEMRKVFA TLRAVVEVME YLSKDAAPDG VGRLIKEELR
201: RIKKSDATLS GELAPYNIVP LEAASLTNAI GFFPEVQGAI SAVKYTEQFP QLPAGFDIPG QRHMDMFDLL EYAFGFQKDN VRNQRENVIL IVANAQSRLG
301: IPVGADPKID EKVITEVFLK VLDNYIKWCR YLRIRLVWNK LEAINRDRKL FLVSLYFCIW GEAANVRFLP ECICYIFHHM ARELDAILDH GEARPAPCCL
401: GEDQSVSFLE KIIRPIYDTI VSEAARNNNG KAAHSKWRNY DDFNEYFWSP ACFELGWPFN KESSFLRKPA KKGKRTGKST FVEHRTFLHL YRSFHRLWIF
501: LVVMFQALTI IAFSNAKINL DTFKKLLSVG PTFAVMNFIE SFLDVILMFG AYSTARGMAI SRIVIRFIWT AVSSAFVIYV YLKLLQERNT NKDPFYFRLY
601: ILVLGVYAGI RVVFALLTKL PACHKLSEMS DQSFFQFFKW IYQERYFVGR GLVEKTTDYL RYSLYWLVIF ACKFTFAYFL QIKPLVGPSK LIYQMPSLQY
701: SWHDFISKNN NNILTIVSLW APVVAIYLMD IHIWYTLLSA IVGGVMGARA RLGEIRSIEM VHKRFESFPE AFVKNLVSPQ TKRIPIDRQL SEVLSNRLQK
801: INEGAVEDGD NLSKCVSGS
101: IKQKLAKKEG TRIDRNRDIE RLWEFYQQYK RRHKVDDIQR EEQKWRESGA VSANIGELGL RFFEMRKVFA TLRAVVEVME YLSKDAAPDG VGRLIKEELR
201: RIKKSDATLS GELAPYNIVP LEAASLTNAI GFFPEVQGAI SAVKYTEQFP QLPAGFDIPG QRHMDMFDLL EYAFGFQKDN VRNQRENVIL IVANAQSRLG
301: IPVGADPKID EKVITEVFLK VLDNYIKWCR YLRIRLVWNK LEAINRDRKL FLVSLYFCIW GEAANVRFLP ECICYIFHHM ARELDAILDH GEARPAPCCL
401: GEDQSVSFLE KIIRPIYDTI VSEAARNNNG KAAHSKWRNY DDFNEYFWSP ACFELGWPFN KESSFLRKPA KKGKRTGKST FVEHRTFLHL YRSFHRLWIF
501: LVVMFQALTI IAFSNAKINL DTFKKLLSVG PTFAVMNFIE SFLDVILMFG AYSTARGMAI SRIVIRFIWT AVSSAFVIYV YLKLLQERNT NKDPFYFRLY
601: ILVLGVYAGI RVVFALLTKL PACHKLSEMS DQSFFQFFKW IYQERYFVGR GLVEKTTDYL RYSLYWLVIF ACKFTFAYFL QIKPLVGPSK LIYQMPSLQY
701: SWHDFISKNN NNILTIVSLW APVVAIYLMD IHIWYTLLSA IVGGVMGARA RLGEIRSIEM VHKRFESFPE AFVKNLVSPQ TKRIPIDRQL SEVLSNRLQK
801: INEGAVEDGD NLSKCVSGS
0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
Arabidopsis Description
CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.