Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047243 | Potato | cytosol | 98.17 | 96.89 |
| KRH55958 | Soybean | plasma membrane | 38.97 | 83.44 |
| VIT_12s0028g03720.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plasma membrane | 63.09 | 79.27 |
| Bra034217.1-P | Field mustard | mitochondrion | 9.74 | 73.28 |
| AT4G03550.1 | Thale cress | plasma membrane | 74.67 | 73.2 |
| Bra034218.1-P | Field mustard | plasma membrane | 74.67 | 73.12 |
| CDY21974 | Canola | plasma membrane | 74.67 | 73.08 |
| CDY48567 | Canola | plasma membrane | 74.67 | 73.08 |
| KRH22386 | Soybean | cytosol, plasma membrane, plastid | 72.66 | 72.75 |
| Os01t0672500-01 | Rice | plasma membrane | 19.71 | 72.27 |
| GSMUA_Achr1P27410_001 | Banana | cytosol | 56.5 | 68.95 |
| Solyc02g078230.1.1 | Tomato | cytosol | 70.2 | 68.63 |
| KXG33086 | Sorghum | cytosol | 67.62 | 66.33 |
| Zm00001d043909_P002 | Maize | cytosol | 67.51 | 66.22 |
| TraesCS2A01G493000.1 | Wheat | plasma membrane | 16.5 | 65.6 |
| TraesCS3D01G246000.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 56.5 | 65.13 |
| TraesCS3B01G274100.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 56.33 | 64.97 |
| TraesCS3A01G245500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 56.33 | 64.8 |
| TraesCS3D01G292500.1 | Wheat | cytosol, nucleus, peroxisome | 66.07 | 64.49 |
| HORVU3Hr1G072540.2 | Barley | mitochondrion | 66.13 | 64.4 |
| Os01t0754200-03 | Rice | cytosol, mitochondrion, peroxisome, plasma membrane | 66.02 | 64.36 |
| TraesCS3B01G327500.1 | Wheat | mitochondrion | 66.02 | 64.29 |
| TraesCS3A01G292700.1 | Wheat | cytosol | 66.07 | 64.23 |
| KXG33388 | Sorghum | mitochondrion | 65.85 | 64.19 |
| HORVU3Hr1G061700.1 | Barley | cytosol, plastid | 67.56 | 63.01 |
| Zm00001d043428_P005 | Maize | cytosol, plastid | 65.56 | 62.86 |
| TraesCS2B01G521100.1 | Wheat | unclear | 62.35 | 61.47 |
| HORVU2Hr1G109970.1 | Barley | cytosol | 53.93 | 56.45 |
| GSMUA_Achr4P01160_001 | Banana | plastid | 32.44 | 56.15 |
| Zm00001d041460_P001 | Maize | mitochondrion, plasma membrane | 13.64 | 55.09 |
| TraesCS2A01G493100.1 | Wheat | mitochondrion | 12.55 | 54.89 |
| Solyc03g111570.2.1 | Tomato | nucleus, plastid | 33.12 | 51.7 |
| Solyc01g006350.2.1 | Tomato | endoplasmic reticulum, nucleus | 32.66 | 50.76 |
| Solyc11g005980.1.1 | Tomato | cytosol, plastid | 46.7 | 42.21 |
| Solyc01g073750.2.1 | Tomato | nucleus | 43.38 | 42.1 |
| Solyc01g006370.2.1 | Tomato | nucleus | 46.13 | 41.32 |
| Solyc07g056260.2.1 | Tomato | cytosol, plastid | 44.93 | 41.03 |
| Solyc07g061920.2.1 | Tomato | cytosol | 42.35 | 37.82 |
| Solyc01g006360.2.1 | Tomato | nucleus | 12.55 | 28.7 |
| Solyc03g111560.2.1 | Tomato | nucleus | 11.86 | 25.27 |
Protein Annotations
| KEGG:00500+2.4.1.34 | MapMan:21.7.1 | ncoils:Coil | InterPro:FKS1-like_dom1 | GO:GO:0000003 | GO:GO:0000148 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003843 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006075 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009555 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009620 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009863 | GO:GO:0009870 | GO:GO:0009965 | GO:GO:0009987 |
| GO:GO:0010150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0042742 |
| GO:GO:0050832 | GO:GO:0052542 | GO:GO:0052544 | InterPro:Glyco_trans_48 | UniProt:K4CFU3 | PFAM:PF02364 |
| PFAM:PF14288 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF23 | SMART:SM01205 | EnsemblPlantsGene:Solyc07g053980.2 | EnsemblPlants:Solyc07g053980.2.1 |
| TMHMM:TMhelix | UniParc:UPI000276C208 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:-:62388193..62395031
Molecular Weight (calculated)
203254.0 Da
IEP (calculated)
9.539
GRAVY (calculated)
-0.051
Length
1745 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLRQRSTPA ARQVSIDEEP YNIIPIHNLL ADHPSLRFPE VRAAAAALRS VGDLRRPPFA PWKPHYDLLD WLALFFGFQD SSVRNQREHI VLHLANAQMR
0101: LSPPPDNIDS LDPAVLRRFR RQLLKNYSSW CSFLGLKSNV WLSDRHNSSD HRRELLYVSL YLLIWGESAN LRFVPECLCF IFHNMAMELN KILEDYIDEN
0201: TGRPFLPSIS GENAFLNRIV TPIYQTIRAE ADNSRNGTAP HSAWRNYDDI NEYFWTKRCF DKLKWPIDIG STFFVTTNKG KKVGKTGFVE QRSFLNLYRS
0301: FDKLWIMLAL FLQAAIIVAW EGKPYPWQAL ESREVQVRVL TIFFTWSSMR FLQSLLDAGM QYRIISRETP WHGVRMVLKS VVAAAWIVVF GAFYGRIWIQ
0401: RNRDGKWSSA ANRRVVNFLE VALVFIAPEL LALALFVLPW VRNFLENTNW RIFYLLSWWF QSRTFVGRGL REGLVDNIKY SLFWVVVLAT KFSFSYFLQI
0501: KPMIVPTRAL LRLRDVKYEW HEFFNHTVGL FDHLGEIRNM PQLRLRFQFF ASAMQFNLMP EEQLLNAQGT LKSKFKDAIL RLKLRYGFGR PFKKLESNQV
0601: EANKFALIWN EIITTFREED ILNDREVELL ELPQNTWNVR VIRWPCLLLC NEVLLGLSQA KELVDAPDKW LWHKISKYEY RRCAVIEAYD STRHLLLEIV
0701: KLNSEEHSII TTFFQQIDQW IQLEKFTKYY NLTALPQIRG KLIALLDLLL KPKKDVDKIV NVLQALYEVA TRDFLKEKMT GDQLREEGLA LQASATRLLF
0801: ENVVSLPDPE NETFYRQARR LNTILTSRDS MSNIPRNLEA RRRLAFFSNS LFMNMPHAPQ VEKMMAFSVL TPYYNEDVLY NKEQLRTENE DGISTLYYLQ
0901: TIYADEWENF LQRMRREGMV DEKKELWTTK LRDLRLWASY RGQTLTRTVR GMMYYYRALK MLAFLDSACE MDIREGSVEL GSMRHDDSIG GLSSERSQSS
1001: RRLSRADSSV SMLFKGHEYG TALMKFTYVV ACQIYGAQKA KKDPHAEEIL YLMKNNEALR VAYVDEVPTG RDEKDYYSVL VKYDQKLERE VEIYRVKLPG
1101: PLKLGEGKPE NQNHAFIFTR GDAVQTIDMN QDNYFEEALK MRNLLEEFKL YYGIRKPTIL GVREHIFTGS VSSLAWFMSA QEMSFVTLGQ RVLANPLKIR
1201: MHYGHPDVFD RFWFLTRGGI SKASKVINIS EDIFAGFNCT LRGGNVTHHE YIQVGKGRDV GLNQISMFEA KVASGNGEQV LSRDVYRLGH RLDFFRMLSF
1301: FYTTVGFFFN TMMIVLTVYA FLWGRLYLAL SGVEGSVAAD TTDNNRALGA ILNQQFIIQL GLFTALPMIV ENSLEHGFLT SIWEFLTMML QLSSVFYTFS
1401: MGTRAHYFGR TILHGGAKYR ATGRGFVVQH KCFAENYRLY ARSHFVKAIE LGLILTVYAA YSPVAKGTFT YIALTISSWF LVVSWILGPF VFNPSGFDWL
1501: KTVYDFDDFM NWIWYRGSVF AKSDQSWEKW WEEEQDHLRT TGLWGKILEI ILDLRFFFFQ YGIVYHLGIA AGSKSIAVYL LSWIYVVVAL GFFNITAYAR
1601: EKYAAREHIY FRLVQLLAVL FFIVVIVALL QFTAFKFGDL FVSLLAFVPT GWGFISIAQV LRPFLQKSMI WGTVVSVARL YEIMFGIIVM VPVAVLSWLP
1701: GFQPMQTRIL FNEAFSRGLR IFQIVTGKKP KSDVIYRNIK YECSM
0101: LSPPPDNIDS LDPAVLRRFR RQLLKNYSSW CSFLGLKSNV WLSDRHNSSD HRRELLYVSL YLLIWGESAN LRFVPECLCF IFHNMAMELN KILEDYIDEN
0201: TGRPFLPSIS GENAFLNRIV TPIYQTIRAE ADNSRNGTAP HSAWRNYDDI NEYFWTKRCF DKLKWPIDIG STFFVTTNKG KKVGKTGFVE QRSFLNLYRS
0301: FDKLWIMLAL FLQAAIIVAW EGKPYPWQAL ESREVQVRVL TIFFTWSSMR FLQSLLDAGM QYRIISRETP WHGVRMVLKS VVAAAWIVVF GAFYGRIWIQ
0401: RNRDGKWSSA ANRRVVNFLE VALVFIAPEL LALALFVLPW VRNFLENTNW RIFYLLSWWF QSRTFVGRGL REGLVDNIKY SLFWVVVLAT KFSFSYFLQI
0501: KPMIVPTRAL LRLRDVKYEW HEFFNHTVGL FDHLGEIRNM PQLRLRFQFF ASAMQFNLMP EEQLLNAQGT LKSKFKDAIL RLKLRYGFGR PFKKLESNQV
0601: EANKFALIWN EIITTFREED ILNDREVELL ELPQNTWNVR VIRWPCLLLC NEVLLGLSQA KELVDAPDKW LWHKISKYEY RRCAVIEAYD STRHLLLEIV
0701: KLNSEEHSII TTFFQQIDQW IQLEKFTKYY NLTALPQIRG KLIALLDLLL KPKKDVDKIV NVLQALYEVA TRDFLKEKMT GDQLREEGLA LQASATRLLF
0801: ENVVSLPDPE NETFYRQARR LNTILTSRDS MSNIPRNLEA RRRLAFFSNS LFMNMPHAPQ VEKMMAFSVL TPYYNEDVLY NKEQLRTENE DGISTLYYLQ
0901: TIYADEWENF LQRMRREGMV DEKKELWTTK LRDLRLWASY RGQTLTRTVR GMMYYYRALK MLAFLDSACE MDIREGSVEL GSMRHDDSIG GLSSERSQSS
1001: RRLSRADSSV SMLFKGHEYG TALMKFTYVV ACQIYGAQKA KKDPHAEEIL YLMKNNEALR VAYVDEVPTG RDEKDYYSVL VKYDQKLERE VEIYRVKLPG
1101: PLKLGEGKPE NQNHAFIFTR GDAVQTIDMN QDNYFEEALK MRNLLEEFKL YYGIRKPTIL GVREHIFTGS VSSLAWFMSA QEMSFVTLGQ RVLANPLKIR
1201: MHYGHPDVFD RFWFLTRGGI SKASKVINIS EDIFAGFNCT LRGGNVTHHE YIQVGKGRDV GLNQISMFEA KVASGNGEQV LSRDVYRLGH RLDFFRMLSF
1301: FYTTVGFFFN TMMIVLTVYA FLWGRLYLAL SGVEGSVAAD TTDNNRALGA ILNQQFIIQL GLFTALPMIV ENSLEHGFLT SIWEFLTMML QLSSVFYTFS
1401: MGTRAHYFGR TILHGGAKYR ATGRGFVVQH KCFAENYRLY ARSHFVKAIE LGLILTVYAA YSPVAKGTFT YIALTISSWF LVVSWILGPF VFNPSGFDWL
1501: KTVYDFDDFM NWIWYRGSVF AKSDQSWEKW WEEEQDHLRT TGLWGKILEI ILDLRFFFFQ YGIVYHLGIA AGSKSIAVYL LSWIYVVVAL GFFNITAYAR
1601: EKYAAREHIY FRLVQLLAVL FFIVVIVALL QFTAFKFGDL FVSLLAFVPT GWGFISIAQV LRPFLQKSMI WGTVVSVARL YEIMFGIIVM VPVAVLSWLP
1701: GFQPMQTRIL FNEAFSRGLR IFQIVTGKKP KSDVIYRNIK YECSM
0001: MSLRHRTVPP QTGRPLAAEA VGIEEEPYNI IPVNNLLADH PSLRFPEVRA AAAALKTVGD LRRPPYVQWR SHYDLLDWLA LFFGFQKDNV RNQREHMVLH
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV
Arabidopsis Description
CALS12Callose synthase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT82]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.