Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034218.1-P | Field mustard | plasma membrane | 91.29 | 91.19 |
| CDY48567 | Canola | plasma membrane | 91.24 | 91.08 |
| CDY21974 | Canola | plasma membrane | 91.18 | 91.03 |
| Bra034217.1-P | Field mustard | mitochondrion | 11.63 | 89.22 |
| KRH55958 | Soybean | plasma membrane | 36.74 | 80.25 |
| VIT_12s0028g03720.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plasma membrane | 59.1 | 75.74 |
| PGSC0003DMT400047243 | Potato | cytosol | 74.38 | 74.89 |
| Solyc07g053980.2.1 | Tomato | nucleus | 73.2 | 74.67 |
| KRH22386 | Soybean | cytosol, plasma membrane, plastid | 70.06 | 71.54 |
| Os01t0672500-01 | Rice | plasma membrane | 18.43 | 68.91 |
| GSMUA_Achr1P27410_001 | Banana | cytosol | 54.66 | 68.04 |
| AT4G04970.1 | Thale cress | cytosol | 64.16 | 64.59 |
| KXG33086 | Sorghum | cytosol | 64.55 | 64.59 |
| Zm00001d043909_P002 | Maize | cytosol | 64.21 | 64.25 |
| TraesCS2A01G493000.1 | Wheat | plasma membrane | 15.84 | 64.24 |
| TraesCS3D01G246000.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 54.55 | 64.13 |
| TraesCS3B01G274100.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 54.38 | 63.98 |
| TraesCS3A01G245500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 54.49 | 63.94 |
| HORVU3Hr1G072540.2 | Barley | mitochondrion | 63.88 | 63.45 |
| TraesCS3B01G327500.1 | Wheat | mitochondrion | 63.71 | 63.28 |
| TraesCS3D01G292500.1 | Wheat | cytosol, nucleus, peroxisome | 63.54 | 63.26 |
| KXG33388 | Sorghum | mitochondrion | 63.6 | 63.24 |
| Os01t0754200-03 | Rice | cytosol, mitochondrion, peroxisome, plasma membrane | 63.54 | 63.18 |
| TraesCS3A01G292700.1 | Wheat | cytosol | 63.48 | 62.95 |
| Zm00001d043428_P005 | Maize | cytosol, plastid | 63.48 | 62.09 |
| HORVU3Hr1G061700.1 | Barley | cytosol, plastid | 65.11 | 61.95 |
| TraesCS2B01G521100.1 | Wheat | unclear | 61.18 | 61.53 |
| GSMUA_Achr4P01160_001 | Banana | plastid | 32.47 | 57.34 |
| HORVU2Hr1G109970.1 | Barley | cytosol | 52.75 | 56.33 |
| TraesCS2A01G493100.1 | Wheat | mitochondrion | 11.63 | 51.88 |
| Zm00001d041460_P001 | Maize | mitochondrion, plasma membrane | 12.3 | 50.69 |
| AT2G13680.1 | Thale cress | cytosol | 46.29 | 42.85 |
| AT3G07160.2 | Thale cress | cytosol | 44.21 | 41.6 |
| AT5G13000.1 | Thale cress | cytosol, mitochondrion, nucleus, plasma membrane | 45.67 | 41.59 |
| AT1G05570.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 45.11 | 41.18 |
| AT2G36850.1 | Thale cress | mitochondrion | 43.82 | 40.97 |
| AT2G31960.3 | Thale cress | cytosol | 44.72 | 40.82 |
| AT5G36870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 42.81 | 40.73 |
| AT3G59100.1 | Thale cress | cytosol | 43.71 | 40.5 |
| AT1G06490.1 | Thale cress | cytosol | 44.27 | 40.25 |
| AT3G14570.1 | Thale cress | cytosol | 41.69 | 37.55 |
| AT3G14780.1 | Thale cress | nucleus | 2.36 | 12.1 |
Protein Annotations
| KEGG:00500+2.4.1.34 | MapMan:21.7.1 | EntrezGene:825650 | ProteinID:AAD11597.1 | ProteinID:AAD15311.1 | ProteinID:AEE82336.1 |
| ArrayExpress:AT4G03550 | EnsemblPlantsGene:AT4G03550 | RefSeq:AT4G03550 | TAIR:AT4G03550 | RefSeq:AT4G03550-TAIR-G | EnsemblPlants:AT4G03550.1 |
| TAIR:AT4G03550.1 | Symbol:ATGSL05 | Unigene:At.3956 | ProteinID:CAB77840.1 | ncoils:Coil | InterPro:FKS1-like_dom1 |
| GO:GO:0000003 | GO:GO:0000148 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003843 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005975 |
| GO:GO:0006075 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008360 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009555 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009620 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009863 |
| GO:GO:0009870 | GO:GO:0009965 | GO:GO:0009987 | GO:GO:0010150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0042742 | GO:GO:0050832 | GO:GO:0052542 |
| GO:GO:0052544 | GO:GO:0071555 | InterPro:Glyco_trans_48 | EMBL:KJ138766 | RefSeq:NP_192264.1 | PFAM:PF02364 |
| PFAM:PF14288 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR12741 | PANTHER:PTHR12741:SF23 | UniProt:Q9ZT82 | SMART:SM01205 | TMHMM:TMhelix | UniParc:UPI00000488F5 |
| UniProt:W8PV73 | SEG:seg | : | : | : | : |
Description
CALS12Callose synthase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT82]
Coordinates
chr4:+:1573266..1579820
Molecular Weight (calculated)
206924.0 Da
IEP (calculated)
9.248
GRAVY (calculated)
-0.034
Length
1780 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLRHRTVPP QTGRPLAAEA VGIEEEPYNI IPVNNLLADH PSLRFPEVRA AAAALKTVGD LRRPPYVQWR SHYDLLDWLA LFFGFQKDNV RNQREHMVLH
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV
0101: LANAQMRLSP PPDNIDSLDS AVVRRFRRKL LANYSSWCSY LGKKSNIWIS DRNPDSRREL LYVGLYLLIW GEAANLRFMP ECICYIFHNM ASELNKILED
0201: CLDENTGQPY LPSLSGENAF LTGVVKPIYD TIQAEIDESK NGTVAHCKWR NYDDINEYFW TDRCFSKLKW PLDLGSNFFK SRGKSVGKTG FVERRTFFYL
0301: YRSFDRLWVM LALFLQAAII VAWEEKPDTS SVTRQLWNAL KARDVQVRLL TVFLTWSGMR LLQAVLDAAS QYPLVSRETK RHFFRMLMKV IAAAVWIVAF
0401: TVLYTNIWKQ KRQDRQWSNA ATTKIYQFLY AVGAFLVPEI LALALFIIPW MRNFLEETNW KIFFALTWWF QGKSFVGRGL REGLVDNIKY STFWIFVLAT
0501: KFTFSYFLQV KPMIKPSKLL WNLKDVDYEW HQFYGDSNRF SVALLWLPVV LIYLMDIQIW YAIYSSIVGA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF
0601: NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL
0701: SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG
0801: RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH
0901: APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA
1001: LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ
1101: NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR
1201: KPTILGVREH IFTGSVSSLA WFMSAQETSF VTLGQRVLAN PLKVRMHYGH PDVFDRFWFL SRGGISKASR VINISEDIFA GFNCTLRGGN VTHHEYIQVG
1301: KGRDVGLNQI SMFEAKVASG NGEQVLSRDV YRLGHRLDFF RMLSFFYTTV GFFFNTMMVI LTVYAFLWGR VYLALSGVEK SALADSTDTN AALGVILNQQ
1401: FIIQLGLFTA LPMIVEWSLE EGFLLAIWNF IRMQIQLSAV FYTFSMGTRA HYFGRTILHG GAKYRATGRG FVVEHKGFTE NYRLYARSHF VKAIELGLIL
1501: IVYASHSPIA KDSLIYIAMT ITSWFLVISW IMAPFVFNPS GFDWLKTVYD FEDFMNWIWY QGRISTKSEQ SWEKWWYEEQ DHLRNTGKAG LFVEIILVLR
1601: FFFFQYGIVY QLKIANGSTS LFVYLFSWIY IFAIFVLFLV IQYARDKYSA KAHIRYRLVQ FLLIVLAILV IVALLEFTHF SFIDIFTSLL AFIPTGWGIL
1701: LIAQTQRKWL KNYTIFWNAV VSVARMYDIL FGILIMVPVA FLSWMPGFQS MQTRILFNEA FSRGLRIMQI VTGKKSKGDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.