Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 2
- plastid 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67918 | Canola | cytosol, nucleus, plasma membrane | 68.81 | 55.32 |
| GSMUA_Achr5P11670_001 | Banana | cytosol | 20.71 | 54.11 |
| Solyc03g111560.2.1 | Tomato | nucleus | 51.77 | 48.23 |
| KRG93041 | Soybean | mitochondrion | 71.17 | 28.5 |
| KRH36300 | Soybean | cytosol | 71.04 | 28.44 |
| AT3G07160.2 | Thale cress | cytosol | 69.46 | 28.01 |
| CDY24642 | Canola | cytosol | 69.99 | 27.97 |
| Bra029628.1-P | Field mustard | cytosol | 69.86 | 27.86 |
| CDY08011 | Canola | cytosol | 65.92 | 26.46 |
| Bra001239.1-P | Field mustard | mitochondrion | 66.06 | 26.43 |
| VIT_06s0004g01200.t01 | Wine grape | cytosol | 63.3 | 26.36 |
| Bra040364.1-P | Field mustard | cytosol | 64.88 | 25.9 |
| Os03t0119500-01 | Rice | plasma membrane | 64.48 | 25.81 |
| CDY34913 | Canola | cytosol | 63.83 | 25.75 |
| TraesCS4B01G351900.1 | Wheat | cytosol | 63.83 | 25.54 |
| HORVU4Hr1G085510.11 | Barley | cytosol | 63.7 | 25.53 |
| TraesCS4D01G346600.1 | Wheat | golgi | 63.7 | 25.53 |
| KXG40330 | Sorghum | cytosol | 63.83 | 25.5 |
| CDX74058 | Canola | mitochondrion | 65.27 | 25.49 |
| TraesCS5A01G520600.3 | Wheat | cytosol | 63.7 | 25.33 |
| Zm00001d027392_P003 | Maize | cytosol | 63.3 | 25.2 |
| GSMUA_Achr5P11660_001 | Banana | cytosol, peroxisome, plasma membrane | 47.05 | 22.01 |
| Solyc11g005980.1.1 | Tomato | cytosol, plastid | 35.78 | 14.14 |
| Solyc01g073750.2.1 | Tomato | nucleus | 32.9 | 13.96 |
| Solyc01g006370.2.1 | Tomato | nucleus | 34.6 | 13.55 |
| Solyc07g061920.2.1 | Tomato | cytosol | 33.81 | 13.2 |
| Solyc07g056260.2.1 | Tomato | cytosol, plastid | 32.5 | 12.98 |
| Solyc07g053980.2.1 | Tomato | nucleus | 28.7 | 12.55 |
| Solyc02g078230.1.1 | Tomato | cytosol | 27.92 | 11.93 |
| CDY05323 | Canola | golgi, plasma membrane | 8.91 | 5.66 |
| PGSC0003DMT400082009 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 4.72 | 3.14 |
| Solyc03g111570.2.1 | Tomato | nucleus, plastid | 1.83 | 1.25 |
| Solyc01g006350.2.1 | Tomato | endoplasmic reticulum, nucleus | 1.83 | 1.25 |
| CDY67747 | Canola | mitochondrion | 0.66 | 0.78 |
Protein Annotations
| EnsemblPlants:Solyc01g006360.2.1 | EnsemblPlantsGene:Solyc01g006360.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:FKS1-like_dom1 |
| KEGG:00500+2.4.1.34 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF12 | PFAM:PF14288 | SEG:seg | SMART:SM01205 |
| TMHMM:TMhelix | UniParc:UPI00027620BD | UniProt:K4ASK2 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1:-:955781..982687
Molecular Weight (calculated)
88500.3 Da
IEP (calculated)
9.372
GRAVY (calculated)
-0.080
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPLMCPEYV ICEHAYSLAQ NLDPNSEGRG VLQFKTGLMS VIKQKLAKRE GGTIDRSQDI TLLQEFYKQY RERHNVDKLR EEELKLRESG VFSGNLGELE
101: RKTVQRKKVL ATLKVLGNVL EQLTKEVSPE EADRLIPDEL KRMMESDAAM TEDIAYNIIP LDTTSTTNAI VSFSEVRAAV SALKYFRGLP KLPGDFSLPS
201: TRSIDLFDFL HYSFGFQQGN VSNQREHIVH LLANEQTRLR IPEEPEPILD EAAVQKVFSK SLDNYIKWCS YLGIPPVWSN LDVVSKEKKL LFISLYFLIW
301: GEAANIRFIP ECLCYIFHHM GRELEELLRQ QVAQPAKSCM SDNGVSFLDQ VICPVYDAIA AEAGNNENGR APHSAWRNYD DFNEYFWSRH CFKLSWPWRT
401: NSSFFLKPTP RSKNILKSGG GKRRGKTSFV EHRTFLHLYH SFHRLWMFLF MFFQGLTILA FNNERLDSKT LREVLSLGPT YVVMKFLESV LDVIMMYGAY
501: STSRRLAVSR IFLRFVWFSI ASVFICFLYV KALEDNSSQN SNSTVFRIYI VVLAIYAGVK FFVSFLLRIP ACHSLTSRCD NWSVVRFIKW MHQEHYYVGR
601: GMYEKTIDFI KYMVFWLVVL GAKFAFAYFL LIKPLVKPTR QIVAMDIRQY SWHDFVSKNN HNALTVASLW APVFIIYLFD THLFYTVISA VWGFLLGARD
701: RLGEIRSLDA VHKRFERFPE AFMNSLHVPL RTRVSLLSSG QVKVYSPHSL QEVLIKIYRD GPK
101: RKTVQRKKVL ATLKVLGNVL EQLTKEVSPE EADRLIPDEL KRMMESDAAM TEDIAYNIIP LDTTSTTNAI VSFSEVRAAV SALKYFRGLP KLPGDFSLPS
201: TRSIDLFDFL HYSFGFQQGN VSNQREHIVH LLANEQTRLR IPEEPEPILD EAAVQKVFSK SLDNYIKWCS YLGIPPVWSN LDVVSKEKKL LFISLYFLIW
301: GEAANIRFIP ECLCYIFHHM GRELEELLRQ QVAQPAKSCM SDNGVSFLDQ VICPVYDAIA AEAGNNENGR APHSAWRNYD DFNEYFWSRH CFKLSWPWRT
401: NSSFFLKPTP RSKNILKSGG GKRRGKTSFV EHRTFLHLYH SFHRLWMFLF MFFQGLTILA FNNERLDSKT LREVLSLGPT YVVMKFLESV LDVIMMYGAY
501: STSRRLAVSR IFLRFVWFSI ASVFICFLYV KALEDNSSQN SNSTVFRIYI VVLAIYAGVK FFVSFLLRIP ACHSLTSRCD NWSVVRFIKW MHQEHYYVGR
601: GMYEKTIDFI KYMVFWLVVL GAKFAFAYFL LIKPLVKPTR QIVAMDIRQY SWHDFVSKNN HNALTVASLW APVFIIYLFD THLFYTVISA VWGFLLGARD
701: RLGEIRSLDA VHKRFERFPE AFMNSLHVPL RTRVSLLSSG QVKVYSPHSL QEVLIKIYRD GPK
0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
Arabidopsis Description
CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.