Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g006360.2.1 | Tomato | nucleus | 55.32 | 68.81 |
| GSMUA_Achr5P11670_001 | Banana | cytosol | 17.18 | 55.82 |
| CDY24642 | Canola | cytosol | 98.84 | 49.14 |
| AT3G07160.2 | Thale cress | cytosol | 91.57 | 45.93 |
| CDY08011 | Canola | cytosol | 86.51 | 43.19 |
| CDX74058 | Canola | mitochondrion | 85.88 | 41.71 |
| CDY34913 | Canola | cytosol | 79.87 | 40.08 |
| KRH36300 | Soybean | cytosol | 73.13 | 36.41 |
| KRG93041 | Soybean | mitochondrion | 71.65 | 35.7 |
| CDY12248 | Canola | cytosol | 5.27 | 33.56 |
| CDY67378 | Canola | cytosol | 16.44 | 33.33 |
| VIT_06s0004g01200.t01 | Wine grape | cytosol | 63.44 | 32.86 |
| CDY42080 | Canola | cytosol | 16.12 | 32.62 |
| CDX72782 | Canola | cytosol | 3.37 | 31.07 |
| Os03t0119500-01 | Rice | plasma membrane | 61.01 | 30.38 |
| HORVU4Hr1G085510.11 | Barley | cytosol | 60.27 | 30.04 |
| TraesCS4B01G351900.1 | Wheat | cytosol | 60.27 | 29.99 |
| TraesCS4D01G346600.1 | Wheat | golgi | 59.75 | 29.78 |
| TraesCS5A01G520600.3 | Wheat | cytosol | 59.75 | 29.55 |
| KXG40330 | Sorghum | cytosol | 59.11 | 29.37 |
| Zm00001d027392_P003 | Maize | cytosol | 58.38 | 28.9 |
| CDY37214 | Canola | cytosol, mitochondrion, nucleus, plastid | 3.06 | 28.43 |
| GSMUA_Achr5P11660_001 | Banana | cytosol, peroxisome, plasma membrane | 47.21 | 27.47 |
| CDX75010 | Canola | cytosol, mitochondrion | 51.95 | 25.82 |
| CDY33198 | Canola | cytosol, mitochondrion | 50.79 | 25.48 |
| CDX86961 | Canola | cytosol | 4.85 | 23.23 |
| CDY01570 | Canola | cytosol | 4.85 | 23.23 |
| CDY72646 | Canola | cytosol | 4.85 | 23.23 |
| CDY38027 | Canola | cytosol | 4.85 | 23.23 |
| CDY16628 | Canola | cytosol, nucleus, plasma membrane | 26.98 | 23.17 |
| CDY44741 | Canola | cytosol, nucleus, plasma membrane | 26.87 | 23.08 |
| CDY05323 | Canola | golgi, plasma membrane | 28.13 | 22.21 |
| CDY67195 | Canola | cytosol | 6.01 | 21.27 |
| CDY42081 | Canola | cytosol | 5.69 | 20.0 |
| CDY10203 | Canola | plasma membrane | 32.24 | 19.5 |
| CDX81451 | Canola | cytosol, plastid | 34.88 | 17.13 |
| CDY12867 | Canola | cytosol | 5.58 | 16.93 |
| CDY42084 | Canola | cytosol, nucleus, plasma membrane | 34.04 | 16.82 |
| CDY12242 | Canola | mitochondrion | 34.04 | 16.68 |
| CDY10125 | Canola | mitochondrion | 34.14 | 16.68 |
| CDX69678 | Canola | cytosol | 34.35 | 16.67 |
| CDX97217 | Canola | cytosol | 34.35 | 16.67 |
| CDX91152 | Canola | cytosol, mitochondrion, nucleus, plasma membrane | 34.25 | 16.63 |
| CDX85677 | Canola | cytosol, mitochondrion, nucleus, plasma membrane | 34.04 | 16.54 |
| CDX67777 | Canola | cytosol | 33.3 | 16.31 |
| CDY06644 | Canola | cytosol | 32.46 | 16.03 |
| CDY47273 | Canola | plasma membrane | 26.87 | 15.09 |
| CDY48567 | Canola | plasma membrane | 28.03 | 14.92 |
| CDY21974 | Canola | plasma membrane | 27.82 | 14.81 |
| CDX98473 | Canola | cytosol | 30.35 | 14.76 |
| CDY06215 | Canola | cytosol | 31.72 | 14.44 |
| CDY09971 | Canola | cytosol | 31.82 | 14.25 |
| CDX98348 | Canola | cytosol, golgi, plasma membrane | 31.72 | 13.07 |
| PGSC0003DMT400082009 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 14.33 | 11.85 |
| Solyc01g006350.2.1 | Tomato | endoplasmic reticulum, nucleus | 13.07 | 11.04 |
| CDY47126 | Canola | plasma membrane | 2.0 | 10.05 |
| CDY67747 | Canola | mitochondrion | 1.05 | 1.55 |
| CDX71163 | Canola | cytosol, extracellular, plasma membrane | 0.11 | 1.23 |
| CDY37215 | Canola | plasma membrane | 0.63 | 0.85 |
| CDY16627 | Canola | cytosol | 0.32 | 0.5 |
| CDY44742 | Canola | cytosol | 0.32 | 0.5 |
| CDY47436 | Canola | extracellular | 0.0 | 0.0 |
| CDY10204 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY67918 | EnsemblPlantsGene:GSBRNA2T00067670001 | GO:A0A078JK77 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FKS1-like_dom1 | KEGG:00500+2.4.1.34 | MetaCyc:PWY-6773 | ncoils:Coil | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF12 |
| PFAM:PF14288 | ProteinID:CDY67918 | ProteinID:CDY67918.1 | SEG:seg | SMART:SM01205 | TMHMM:TMhelix |
| UniParc:UPI0004EE371D | UniProt:A0A078JK77 | MapMan:50.2.4 | : | : | : |
Description
BnaC05g52230DBnaC05g52230D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JK77]
Coordinates
chrLK036655:+:488..8139
Molecular Weight (calculated)
110368.0 Da
IEP (calculated)
7.187
GRAVY (calculated)
-0.147
Length
949 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYVPSSLAN NRDIDAILRA ADELQDEDPS IARILCEHAY SLAQNLDPNS EGRGVLQFKT GLMSVVKQKL AKREVGTIDR SQDIKRLQDF YRLYREKNNV
101: DTLKEDEKQL RESGVFTKEM ERKTLRRKRV FATLKVLGNV LEQVAKEIPD ELKHVIDSDA AMSEDTIAYN IIPLDAPVTT NATTSFPEVQ AAVAALKYFP
201: GLPKLPADFP IPATRNADML DFLHYIFGFQ KDSVSNQREH IVLLLANEQS RLNIPEEREP KLDDAAVRKV FLKSLDNYIK WCDYLCIQPA WSNLETISEE
301: KRLLFLSLYF LIWGEAANIR FLPECLCYIF HHMVREMDEI LRQQVARPAE SCMPVDSRGS DDGVSFLDHV IAPLYGVVSA EAFNNDNGRA PHSAWRNYDD
401: FNEYFWSLHS FELGWPWRTS SSFFQKPIPR KKYDLQTGRA KHRGKTSFVE HRTFLHLYHS FHRLWIFLAM MFQALAIIAF NKNDIYSRKT LREILSLGPT
501: FVVMKFSESV LDVIMMYGAY STTRRLAVSR IFLRFIWFSL ASIVISFLYV KALQEDSNPN SNSVMFKFYV ILIAIYGGVQ LFLSILMRFP TCHNIANKCD
601: RWPVIRFFKW MRQERHYVGR GMYEKTSDFI KYLLFWLVVL SAKFSFAYFL QIEPLVGPTR MIVKQDNIQY SWHDLVSRNN YNALTVASLW APVVAIYLLD
701: IHIFYTIVSA FLGFLLGARD RLGEIRSLEA IHKQFEEFPG AFMRALHVPI TNRTSDPSHQ AADKNKVDAA HFAPFWNQII KCLREEDYIT DFEMDLLLMP
801: KNSGRLQLVQ WPLFLLSSKI LLAKEIAAES NTQEEIIERI ERDDYMKYAV EEVYHTLKLV LMETLEAEGR MWVERIYEDI QASIKDRKIH HDFQLNKLSL
901: VITRVTALLG ILKENETPEH AKGAIKALQD LYDVMRLDIL TFNMRYIQS
101: DTLKEDEKQL RESGVFTKEM ERKTLRRKRV FATLKVLGNV LEQVAKEIPD ELKHVIDSDA AMSEDTIAYN IIPLDAPVTT NATTSFPEVQ AAVAALKYFP
201: GLPKLPADFP IPATRNADML DFLHYIFGFQ KDSVSNQREH IVLLLANEQS RLNIPEEREP KLDDAAVRKV FLKSLDNYIK WCDYLCIQPA WSNLETISEE
301: KRLLFLSLYF LIWGEAANIR FLPECLCYIF HHMVREMDEI LRQQVARPAE SCMPVDSRGS DDGVSFLDHV IAPLYGVVSA EAFNNDNGRA PHSAWRNYDD
401: FNEYFWSLHS FELGWPWRTS SSFFQKPIPR KKYDLQTGRA KHRGKTSFVE HRTFLHLYHS FHRLWIFLAM MFQALAIIAF NKNDIYSRKT LREILSLGPT
501: FVVMKFSESV LDVIMMYGAY STTRRLAVSR IFLRFIWFSL ASIVISFLYV KALQEDSNPN SNSVMFKFYV ILIAIYGGVQ LFLSILMRFP TCHNIANKCD
601: RWPVIRFFKW MRQERHYVGR GMYEKTSDFI KYLLFWLVVL SAKFSFAYFL QIEPLVGPTR MIVKQDNIQY SWHDLVSRNN YNALTVASLW APVVAIYLLD
701: IHIFYTIVSA FLGFLLGARD RLGEIRSLEA IHKQFEEFPG AFMRALHVPI TNRTSDPSHQ AADKNKVDAA HFAPFWNQII KCLREEDYIT DFEMDLLLMP
801: KNSGRLQLVQ WPLFLLSSKI LLAKEIAAES NTQEEIIERI ERDDYMKYAV EEVYHTLKLV LMETLEAEGR MWVERIYEDI QASIKDRKIH HDFQLNKLSL
901: VITRVTALLG ILKENETPEH AKGAIKALQD LYDVMRLDIL TFNMRYIQS
0001: MARVYSNWDR LVRATLRREQ LRNTGQGHER VSSGLAGAVP PSLGRATNID AILQAADEIQ SEDPSVARIL CEQAYSMAQN LDPNSDGRGV LQFKTGLMSV
0101: IKQKLAKRDG ASIDRDRDIE RLWEFYKLYK RRHRVDDIQK EEQKWRESGT TFSSNVGEIL KMRKVFATLR ALIEVLEVLS RDADPNGVGR SIRDELGRIK
0201: KADATLSAEL TPYNIVPLEA QSMTNAIGVF PEVRGAVQAI RYTEHFPRLP VDFEISGQRD ADMFDLLEYI FGFQRDNVRN QREHLVLTLS NAQSQLSIPG
0301: QNDPKIDENA VNEVFLKVLD NYIKWCKYLR IRVVYNKLEA IDRDRKLFLV SLYFLIWGEA ANVRFLPECI CYIFHNMAKE LDAKLDHGEA VRADSCLTGT
0401: DTGSVSFLER IICPIYETIS AETVRNNGGK AAHSEWRNYD DFNEYFWTPA CFELSWPMKT ESRFLSKPKG RKRTAKSSFV EHRTYLHLFR SFIRLWIFMF
0501: IMFQSLTIIA FRNEHLNIET FKILLSAGPT YAIMNFIECL LDVVLMYGAY SMARGMAISR LVIRFLWWGL GSAFVVYYYV KVLDERNKPN QNEFFFHLYI
0601: LVLGCYAAVR LIFGLLVKLP ACHALSEMSD QSFFQFFKWI YQERYFVGRG LFENLSDYCR YVAFWLVVLA SKFTFAYFLQ IKPLVKPTNT IIHLPPFQYS
0701: WHDIVSKSND HALTIVSLWA PVLAIYLMDI HIWYTLLSAI IGGVMGAKAR LGEIRTIEMV HKRFESFPEA FAQNLVSPVV KRVPLGQHAS QDGQDMNKAY
0801: AAMFSPFWNE IIKSLREEDY LSNREMDLLS IPSNTGSLRL VQWPLFLLCS KILVAIDLAM ECKETQEVLW RQICDDEYMA YAVQECYYSV EKILNSMVND
0901: EGRRWVERIF LEISNSIEQG SLAITLNLKK LQLVVSRFTA LTGLLIRNET PDLAKGAAKA MFDFYEVVTH DLLSHDLREQ LDTWNILARA RNEGRLFSRI
1001: AWPRDPEIIE QVKRLHLLLT VKDAAANVPK NLEARRRLEF FTNSLFMDMP QARPVAEMVP FSVFTPYYSE TVLYSSSELR SENEDGISIL FYLQKIFPDE
1101: WENFLERIGR SESTGDADLQ ASSTDALELR FWVSYRGQTL ARTVRGMMYY RRALMLQSFL ERRGLGVDDA SLTNMPRGFE SSIEARAQAD LKFTYVVSCQ
1201: IYGQQKQQKK PEATDIGLLL QRYEALRVAF IHSEDVGNGD GGSGGKKEFY SKLVKADIHG KDEEIYSIKL PGDPKLGEGK PENQNHAIVF TRGEAIQTID
1301: MNQDNYLEEA IKMRNLLEEF HGKHGIRRPT ILGVREHVFT GSVSSLAWFM SNQETSFVTL GQRVLAYPLK VRMHYGHPDV FDRIFHITRG GISKASRVIN
1401: ISEDIYAGFN STLRQGNITH HEYIQVGKGR DVGLNQIALF EGKVAGGNGE QVLSRDVYRI GQLFDFFRMM SFYFTTVGFY VCTMMTVLTV YVFLYGRVYL
1501: AFSGADRAIS RVAKLSGNTA LDAALNAQFL VQIGIFTAVP MVMGFILELG LLKAIFSFIT MQFQLCSVFF TFSLGTRTHY FGRTILHGGA KYRATGRGFV
1601: VQHIKFADNY RLYSRSHFVK AFEVALLLII YIAYGYTDGG ASSFVLLTIS SWFLVISWLF APYIFNPSGF EWQKTVEDFE DWVSWLMYKG GVGVKGELSW
1701: ESWWEEEQAH IQTLRGRILE TILSLRFFMF QYGIVYKLDL TRKNTSLALY GYSWVVLVVI VFLFKLFWYS PRKSSNILLA LRFLQGVASI TFIALIVVAI
1801: AMTDLSIPDM FACVLGFIPT GWALLSLAIT WKQVLRVLGL WETVREFGRI YDAAMGMLIF SPIALLSWFP FISTFQSRLL FNQAFSRGLE ISIILAGNRA
1901: NVET
0101: IKQKLAKRDG ASIDRDRDIE RLWEFYKLYK RRHRVDDIQK EEQKWRESGT TFSSNVGEIL KMRKVFATLR ALIEVLEVLS RDADPNGVGR SIRDELGRIK
0201: KADATLSAEL TPYNIVPLEA QSMTNAIGVF PEVRGAVQAI RYTEHFPRLP VDFEISGQRD ADMFDLLEYI FGFQRDNVRN QREHLVLTLS NAQSQLSIPG
0301: QNDPKIDENA VNEVFLKVLD NYIKWCKYLR IRVVYNKLEA IDRDRKLFLV SLYFLIWGEA ANVRFLPECI CYIFHNMAKE LDAKLDHGEA VRADSCLTGT
0401: DTGSVSFLER IICPIYETIS AETVRNNGGK AAHSEWRNYD DFNEYFWTPA CFELSWPMKT ESRFLSKPKG RKRTAKSSFV EHRTYLHLFR SFIRLWIFMF
0501: IMFQSLTIIA FRNEHLNIET FKILLSAGPT YAIMNFIECL LDVVLMYGAY SMARGMAISR LVIRFLWWGL GSAFVVYYYV KVLDERNKPN QNEFFFHLYI
0601: LVLGCYAAVR LIFGLLVKLP ACHALSEMSD QSFFQFFKWI YQERYFVGRG LFENLSDYCR YVAFWLVVLA SKFTFAYFLQ IKPLVKPTNT IIHLPPFQYS
0701: WHDIVSKSND HALTIVSLWA PVLAIYLMDI HIWYTLLSAI IGGVMGAKAR LGEIRTIEMV HKRFESFPEA FAQNLVSPVV KRVPLGQHAS QDGQDMNKAY
0801: AAMFSPFWNE IIKSLREEDY LSNREMDLLS IPSNTGSLRL VQWPLFLLCS KILVAIDLAM ECKETQEVLW RQICDDEYMA YAVQECYYSV EKILNSMVND
0901: EGRRWVERIF LEISNSIEQG SLAITLNLKK LQLVVSRFTA LTGLLIRNET PDLAKGAAKA MFDFYEVVTH DLLSHDLREQ LDTWNILARA RNEGRLFSRI
1001: AWPRDPEIIE QVKRLHLLLT VKDAAANVPK NLEARRRLEF FTNSLFMDMP QARPVAEMVP FSVFTPYYSE TVLYSSSELR SENEDGISIL FYLQKIFPDE
1101: WENFLERIGR SESTGDADLQ ASSTDALELR FWVSYRGQTL ARTVRGMMYY RRALMLQSFL ERRGLGVDDA SLTNMPRGFE SSIEARAQAD LKFTYVVSCQ
1201: IYGQQKQQKK PEATDIGLLL QRYEALRVAF IHSEDVGNGD GGSGGKKEFY SKLVKADIHG KDEEIYSIKL PGDPKLGEGK PENQNHAIVF TRGEAIQTID
1301: MNQDNYLEEA IKMRNLLEEF HGKHGIRRPT ILGVREHVFT GSVSSLAWFM SNQETSFVTL GQRVLAYPLK VRMHYGHPDV FDRIFHITRG GISKASRVIN
1401: ISEDIYAGFN STLRQGNITH HEYIQVGKGR DVGLNQIALF EGKVAGGNGE QVLSRDVYRI GQLFDFFRMM SFYFTTVGFY VCTMMTVLTV YVFLYGRVYL
1501: AFSGADRAIS RVAKLSGNTA LDAALNAQFL VQIGIFTAVP MVMGFILELG LLKAIFSFIT MQFQLCSVFF TFSLGTRTHY FGRTILHGGA KYRATGRGFV
1601: VQHIKFADNY RLYSRSHFVK AFEVALLLII YIAYGYTDGG ASSFVLLTIS SWFLVISWLF APYIFNPSGF EWQKTVEDFE DWVSWLMYKG GVGVKGELSW
1701: ESWWEEEQAH IQTLRGRILE TILSLRFFMF QYGIVYKLDL TRKNTSLALY GYSWVVLVVI VFLFKLFWYS PRKSSNILLA LRFLQGVASI TFIALIVVAI
1801: AMTDLSIPDM FACVLGFIPT GWALLSLAIT WKQVLRVLGL WETVREFGRI YDAAMGMLIF SPIALLSWFP FISTFQSRLL FNQAFSRGLE ISIILAGNRA
1901: NVET
Arabidopsis Description
CALS10Callose synthase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.