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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • nucleus 1
  • plasma membrane 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 99.49 99.54
Bra023386.1-P Field mustard cytosol, mitochondrion, nucleus, plasma membrane 99.33 99.39
CDX97217 Canola cytosol 96.72 96.63
CDX69678 Canola cytosol 96.72 96.63
AT5G13000.1 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 96.52 96.47
VIT_06s0004g01270.t01 Wine grape cytosol, mitochondrion, nucleus, plasma membrane 86.28 85.85
KRH01816 Soybean cytosol 85.31 85.14
KRH46871 Soybean mitochondrion 85.31 85.14
Zm00001d018565_P002 Maize cytosol 27.94 84.0
PGSC0003DMT400082011 Potato mitochondrion 83.57 83.83
Solyc01g006370.2.1 Tomato nucleus 83.42 83.68
Zm00001d014865_P001 Maize cytosol 26.1 82.93
Os02t0832500-01 Rice plasma membrane 12.74 80.06
GSMUA_Achr1P15040_001 Banana mitochondrion 31.17 80.03
Os03t0128100-01 Rice cytosol, plasma membrane 25.54 79.71
Os06t0728800-01 Rice plasma membrane 11.11 78.62
GSMUA_Achr1P15030_001 Banana mitochondrion 47.7 77.99
CDY42084 Canola cytosol, nucleus, plasma membrane 75.54 76.88
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 76.46 76.54
CDY12242 Canola mitochondrion 75.79 76.5
EER90434 Sorghum plastid 76.51 76.08
Zm00001d027475_P001 Maize mitochondrion, plastid 12.03 76.05
Zm00001d036351_P098 Maize plastid 76.2 75.85
Os02t0832400-02 Rice nucleus, peroxisome, plasma membrane, plastid 36.23 75.24
CDY10125 Canola mitochondrion 74.77 75.23
TraesCS6D01G405600.1 Wheat plastid 75.74 75.17
TraesCS6B01G468200.1 Wheat golgi, unclear 75.74 75.09
TraesCS7B01G480300.1 Wheat plastid 75.38 75.08
Os06t0728902-01 Rice plastid 7.37 75.0
TraesCS7D01G554900.1 Wheat plastid 75.44 74.97
Os03t0128200-01 Rice mitochondrion 20.68 74.95
TraesCS7A01G555700.1 Wheat plastid 75.13 74.9
TraesCS6A01G420100.1 Wheat plastid 75.59 74.78
CDY47273 Canola plasma membrane 64.59 74.67
Zm00001d018560_P002 Maize plastid 22.77 73.55
Zm00001d027472_P002 Maize mitochondrion 72.62 72.92
OQU93328 Sorghum mitochondrion 72.67 72.67
TraesCS4B01G321300.2 Wheat mitochondrion 71.39 71.69
TraesCS5A01G490800.2 Wheat mitochondrion 71.24 71.53
TraesCS4D01G317900.5 Wheat mitochondrion 71.44 71.48
Zm00001d014867_P001 Maize plastid 40.07 71.18
CDY37215 Canola plasma membrane 25.18 69.99
Zm00001d018562_P003 Maize golgi 20.88 69.15
CDY67378 Canola cytosol 16.33 68.16
Zm00001d014866_P002 Maize cytosol, extracellular 5.99 67.24
CDY42080 Canola cytosol 15.81 65.88
CDY12248 Canola cytosol 4.81 63.09
CDY47436 Canola extracellular 2.15 61.76
CDX81451 Canola cytosol, plastid 60.8 61.49
CDY37214 Canola cytosol, mitochondrion, nucleus, plastid 3.12 59.8
CDX72782 Canola cytosol 3.12 59.22
CDY72646 Canola cytosol 5.94 58.59
CDY38027 Canola cytosol 5.94 58.59
CDY01570 Canola cytosol 5.94 58.59
CDX86961 Canola cytosol 5.94 58.59
CDY10204 Canola plasma membrane 8.44 57.69
CDX71163 Canola cytosol, extracellular, plasma membrane 2.35 56.79
CDY06644 Canola cytosol 55.63 56.59
CDY44742 Canola cytosol 17.35 56.31
CDY16627 Canola cytosol 17.35 56.31
CDX67777 Canola cytosol 54.76 55.24
CDY10203 Canola plasma membrane 44.27 55.13
CDY67747 Canola mitochondrion 18.17 55.12
CDX98473 Canola cytosol 52.35 52.43
CDY05323 Canola golgi, plasma membrane 31.88 51.83
CDY06215 Canola cytosol 54.91 51.49
CDY09971 Canola cytosol 55.37 51.04
CDY67195 Canola cytosol 6.86 50.0
CDY42081 Canola cytosol 6.45 46.67
CDY12867 Canola cytosol 7.37 46.01
CDY21974 Canola plasma membrane 41.76 45.77
CDY48567 Canola plasma membrane 41.71 45.71
CDX98348 Canola cytosol, golgi, plasma membrane 53.17 45.12
CDY24642 Canola cytosol 44.01 45.05
CDY33198 Canola cytosol, mitochondrion 43.5 44.93
CDX75010 Canola cytosol, mitochondrion 43.86 44.89
CDY08011 Canola cytosol 43.5 44.71
CDX74058 Canola mitochondrion 43.81 43.81
CDY34913 Canola cytosol 41.86 43.26
CDY16628 Canola cytosol, nucleus, plasma membrane 22.62 40.0
CDY44741 Canola cytosol, nucleus, plasma membrane 22.47 39.73
CDY67918 Canola cytosol, nucleus, plasma membrane 16.63 34.25
CDY47126 Canola plasma membrane 3.17 32.8
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1GO:A0A078DQE8InterPro:CALSEnsemblPlants:CDX91152
ProteinID:CDX91152ProteinID:CDX91152.1ncoils:CoilInterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674
GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975
GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00151945001InterPro:Glyco_trans_48InterPro:IPR023175PFAM:PF02364PFAM:PF04652
PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF21MetaCyc:PWY-6773SMART:SM01205TMHMM:TMhelix
UniParc:UPI0004EE0D01InterPro:VPS_Vta1/CALS_NSEG:seg:::
Description
BnaC02g04450D
Coordinates
chrLK031865:+:1045479..1057084
Molecular Weight (calculated)
225869.0 Da
IEP (calculated)
9.378
GRAVY (calculated)
-0.119
Length
1954 amino acids
Sequence
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI VRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALQNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVHY NILPLDPDSA
0201: NQAIMRYPEI QAAVLGLRNT RGLPWPEGHK KKKDEDMLDW LHEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTDVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIAMES
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFYPHVDQPN TEKDGDNSKP AVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVIK KVLSVFITAA IMKLGQAILD VILSFKAHRS MSLHVKLRYI LKVLSAAAWV IILPVTYAYS WKDPPGFART IKSWFGSAMH
0601: SPSLFIIAVV FYLAPNMLAG VFFLFPMLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVSLIATKLT FSYYIEIKPL VAPTQAIMKA
0701: RVTDFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTIFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQR KKGLRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DSYMKCAVRE
0901: CYASFKNVIK FLVQGNREKE VIEFIFTEVD EHIEKGDLIQ VYKMSSLPSL YDHFVKLIKY LLDNNVDDRD HVVILFQDML EVVTRDIMME DSISSLVDSS
1001: HGGAWHGGMV PLEQQYQLFA SSGAIRFPIE PVTEAWKEKI KRLYLLLTTK ESAMDVPSNL EARRRISFFS NSLFMDMPAA PKVRNMLSFS VLTPYYTEEV
1101: LFSMHDLDTP NEDGVSILFY LQKIFPDEWN NFLERVKSNE EEIKESVELE EELRLWASYR GQTLTRTVRG MMYYRKALEL QAFLDMAMHE DLMEGYKAVE
1201: LNSENNSRGE RSLWAQCQAV ADMKFTYVVS CQQYGIHKRS GDPRAQDILR LMTRYPSLRV AYIDEVEEPV KDKSKKGNEK VYYSVLVKVP KSTDHSNLAQ
1301: NLDQVIYRIK LPGPAILGEG KPENQNHAII FSRGEGLQTI DMNQDNYMEE ALKMRNLLEE FLTKHDGVRH PSILGLREHI FTGSVSSLAW FMSNQETSFV
1401: TIGQRLLANP LRVRFHYGHP DVFDRLFHLT RGGVSKASKV INLSEDIFAA GFNSTLREGN VTHHEYIQVG KGRDVGLNQI SMFEAKIANG NGEQTLSRDI
1501: YRLGHRFDFF RMMSCYFTTV GFYFSTLITV LTVYIFLYGR LYLVLSGLEQ GLSTQKGIRD NTPLQIALAS QSFVQIGFLM ALPMLMEIGL ERGFRTALSE
1601: FVLMQLQLAP VFFTFSLGTK THYYGRTLLH GGAKYRSTGR GFVVFHAKFA DNYRLYSRSH FVKGLEMMLL LVVYQIFGSA YRGVVAYLLI TISMWFMVGT
1701: WLFAPFLFNP SGFEWQKIVD DWTDWNKWIN NIGGIGVPAE KSWESWWEEE QEHLRHSGKR GIVVEILLSL RFFIYQYGLV YHLTITEKTK NFMVYGVSWL
1801: VIFLILFVMK TVSVGRRKFS ASFQLMFRLI KGLIFLTFIA IIVILITLAH MTIQDIIVCI LAFMPTGWGM LLIAQACKPV VHRAGFWGSV RTLARGYEIV
1901: MGLLLFTPVA FLAWFPFVSE FQTRMLFNQA FSRGLQISRI LGGHRKDRSS RNKE
Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE
Arabidopsis Description
CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.