Factsheet for GSMUA_Achr1P15030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P13480_001	Banana	cytosol	49.29	88.17
GSMUA_Achr5P10070_001	Banana	cytosol	2.26	65.85
GSMUA_Achr5P16530_001	Banana	cytosol	48.87	64.6
GSMUA_Achr5P10080_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	9.12	60.89
GSMUA_Achr10P...	Banana	cytosol	4.02	58.54
GSMUA_Achr1P05550_001	Banana	endoplasmic reticulum, golgi, plasma membrane	60.0	55.67
GSMUA_Achr2P04760_001	Banana	plasma membrane	48.28	49.44
Bra008864.1-P	Field mustard	cytosol, plastid	77.66	48.08
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	79.0	48.07
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	78.58	48.03
KRH46871	Soybean	mitochondrion	78.49	47.91
PGSC0003DMT400082011	Potato	mitochondrion	77.99	47.84
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	78.16	47.82
Bra023386.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	78.16	47.82
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	77.99	47.7
KRH01816	Soybean	cytosol	77.99	47.6
CDX97217	Canola	cytosol	77.82	47.55
Solyc01g006370.2.1	Tomato	nucleus	77.49	47.54
CDX69678	Canola	cytosol	77.66	47.44
GSMUA_Achr8P13490_001	Banana	plasma membrane	29.2	38.65
GSMUA_Achr7P16080_001	Banana	plasma membrane	62.76	38.6
GSMUA_Achr10P...	Banana	cytosol	63.35	37.72
GSMUA_Achr1P27410_001	Banana	cytosol	42.43	35.45
GSMUA_Achr5P11660_001	Banana	cytosol, peroxisome, plasma membrane	48.2	35.32
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane, plastid	56.74	34.38
GSMUA_Achr4P01160_001	Banana	plastid	28.7	34.03
GSMUA_Achr5P10090_001	Banana	cytosol	1.67	19.05
GSMUA_Achr5P16520_001	Banana	plastid	14.73	15.64
GSMUA_Achr1P05560_001	Banana	plasma membrane	3.93	6.24
GSMUA_Achr2P04770_001	Banana	mitochondrion, plasma membrane	1.92	2.8
GSMUA_Achr8P13500_001	Banana	mitochondrion	1.0	2.53
GSMUA_Achr1P15040_001	Banana	mitochondrion	0.59	0.92
GSMUA_Achr5P11670_001	Banana	cytosol	0.17	0.68

Protein Annotations

KEGG:00500+2.4.1.34	MapMan:21.7.1	InterPro:CALS	GO:GO:0000148	GO:GO:0003674	GO:GO:0003824
GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr1G15030_001	EnsemblPlants:GSMUA_Achr1P15030_001	EnsemblPlants:GSMUA_Achr1T15030_001	InterPro:Glyco_trans_48	UniProt:M0S011
PFAM:PF02364	PANTHER:PTHR12741	PANTHER:PTHR12741:SF21	TMHMM:TMhelix	UniParc:UPI0002964A55	SEG:seg

Description

Callose synthase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G15030_001]

Coordinates

chr1:-:11315738..11328138

Molecular Weight (calculated)

137068.0 Da

IEP (calculated)

9.084

GRAVY (calculated)

-0.097

Length

1195 amino acids

Sequence
(BLAST)

0001: MIQIRTLGML RSRFRSLPGA FNSRLIPPEK SEASKRKGFR ASLSSKIEES PVSGSKDSAR FAQMWNKIIT SFRDEDLISN KEMDLLLVPY TADRDLNDLN
0101: IVQWPPFLLA SKIPIALDMA KDSYGKDSEL KKRITGDTYM NCAVKECYAS FKSIINGLVD DDSREKEVVN NIFSKVDELV HKGSLQELNM SHLPSLCNKF
0201: IELIKFLMTN NEADRDQVII LFQDMLEVVT RDIMEDDLPG YLDSNHGGPY RRHEGITPLD QQVQLFAKAG TIKFPLPKSD AWTEKIKRLH LLLTVKESGS
0301: DVPANIDAKR RISFFCNSLF MNMPNAPKVR NMLAFSVLTP YYKEDVLFSL KGIEEPNEDG VSILFYLQKI YPDEWTNFLE RVGCKTEEEL RERYDEFEEE
0401: LRLWASYRGQ TLTRTVRGMM YYRKALELQA FLDMAKDEDL MDGYKAIELT SEENSKVGRS LWAQCQAVAD MKFTYVVSCQ QYGIQKRSGD SRAQDILRLM
0501: TTYPSLRVAY IDEVEEPSTD RNKKNEKVYY SALVKASLAK AGDSTEPVQN LDQVIYRIKL PGPAILGEGK PENQNHAIIF TRGEGLQTID MNQEHYLEEA
0601: LKMRNLMQEF LKKHDGVRYP SILGVREHIF TGSVSSLAWF MSNQETSFVT IGQRVLANPL RVRFHYGHPD VFDRLFHLTR GGVSKASKII NLSFNSTLRE
0701: GNVTHHEYMQ VGKGRDVGLN QISLFEAKIA NGNGEQTLSR DIYRLGHRFD FFRMLSCYFT TVGFYFSTLV TVLTVYVFLY GRLYLVLSGL DEALATGRKF
0801: MHNQPLQVAL ASQSFVQLGF LMALPMVMES GLERGFRNAL SEFILMQLQL ASVFFTFLLG TKTHYYGRTL LHGGAEYRAT GRGFVVFHAK FADNYRLYSR
0901: SHFVKGLELL ILLVVYEIFG QSYRGPVAYI FITASMWFMV GTWLFSPFLF NPSGFEWQKI VDDWTDWNKW ISNRGGIGVL PEKSWESWWE KEQEHLRYTG
1001: KRGIIAEIVL ALRFLIYQYG LVYHLNITKH TRSVLVYGIS WLVILGILFI MKAVSVGRRR FSAEFQLVFR LIKGLIFIAF VSVLIILIAI AHMTVQDILV
1101: CFLAFMPTGW SLLLIAQACK PLVPSNFWGS IKALARGYEI IMGLLLFTPI AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGPKKDRS SKNKE

Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)

0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE

Arabidopsis Description

CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.