Factsheet for GSMUA_Achr8P13490_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	4.21	46.34
GSMUA_Achr1P15040_001	Banana	mitochondrion	26.69	31.67
GSMUA_Achr1P15030_001	Banana	mitochondrion	38.65	29.2
Zm00001d027472_P002	Maize	mitochondrion	60.35	28.01
OQU93328	Sorghum	mitochondrion	60.24	27.84
GSMUA_Achr5P16520_001	Banana	plastid	34.11	27.38
TraesCS4D01G317900.5	Wheat	mitochondrion	58.36	26.98
TraesCS4B01G321300.2	Wheat	mitochondrion	58.14	26.98
TraesCS5A01G490800.2	Wheat	mitochondrion	58.14	26.98
HORVU4Hr1G082910.11	Barley	mitochondrion	57.59	26.68
GSMUA_Achr4P01160_001	Banana	plastid	24.58	22.02
GSMUA_Achr1P05550_001	Banana	endoplasmic reticulum, golgi, plasma membrane	31.12	21.82
GSMUA_Achr7P16080_001	Banana	plasma membrane	46.51	21.62
GSMUA_Achr10P...	Banana	cytosol	46.62	20.98
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane, plastid	43.3	19.83
GSMUA_Achr1P27410_001	Banana	cytosol	30.23	19.09
GSMUA_Achr5P11660_001	Banana	cytosol, peroxisome, plasma membrane	32.89	18.21
GSMUA_Achr2P04760_001	Banana	plasma membrane	22.7	17.57
GSMUA_Achr5P16530_001	Banana	cytosol	13.62	13.61
GSMUA_Achr2P04770_001	Banana	mitochondrion, plasma membrane	11.41	12.53
Os03t0128200-01	Rice	mitochondrion	7.09	11.87
GSMUA_Achr5P10090_001	Banana	cytosol	1.22	10.48
GSMUA_Achr8P13480_001	Banana	cytosol	2.1	2.84
GSMUA_Achr5P10080_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	0.44	2.23
GSMUA_Achr8P13500_001	Banana	mitochondrion	1.0	1.9
Zm00001d027475_P001	Maize	mitochondrion, plastid	0.55	1.62
GSMUA_Achr5P11670_001	Banana	cytosol	0.44	1.37
Os03t0128100-01	Rice	cytosol, plasma membrane	0.78	1.12
GSMUA_Achr1P05560_001	Banana	plasma membrane	0.78	0.93
GSMUA_Achr5P10070_001	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	MapMan:50.2.4	InterPro:CALS	ncoils:Coil	GO:GO:0000148	GO:GO:0003674
GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975
GO:GO:0006075	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr8G13490_001	EnsemblPlants:GSMUA_Achr8P13490_001	EnsemblPlants:GSMUA_Achr8T13490_001	InterPro:Glyco_trans_48
UniProt:M0TQ52	PFAM:PF02364	PANTHER:PTHR12741	PANTHER:PTHR12741:SF21	TMHMM:TMhelix	UniParc:UPI000295A60B
SEG:seg	:	:	:	:	:

Description

Callose synthase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G13490_001]

Coordinates

chr8:-:10225411..10250815

Molecular Weight (calculated)

104606.0 Da

IEP (calculated)

8.744

GRAVY (calculated)

-0.018

Length

903 amino acids

Sequence
(BLAST)

001: MLHAILYQES KLAKGQQWIG KVNFVEIRSF WHIFRSFDRM WSFFILSLQV MIILAWNGGS PSDIFDPAVF KKVLSIFISA AILKLGQAIL DIMLSWKARK
101: SMSLPVKLRY ILKVISAVAW VIILPVTYAY TLESPTGLGR IMKGWVGNGQ SQPSIYFLAV VIYLSPNMLT ALLFLFPSLR RYLESSNYKI IMLMMWWSQV
201: LEYQKILNFF LYSSFPLCAS HSKWQPRLFV GRGMHEGPFS LFMYTLFWVL LILTKLVFSY YIEIKPLVSP TKDIMRIPIR TFQWHEFFPQ AKNNIGVVIA
301: LWAPIILVYF MDTQIWYAIF STLVGGIYGA CRRLGEIRSL ELLRSRFDSL PDQFNARLIP VNNSENKKKG LKASLSRRFG QMPNIAKEKQ PYADKQMRAR
401: FAQIWNTIIT SFRKEDLISN REMDLLLVPY WADRELDLPQ WPPFLLAGKI PVAVHMAKDS KGNDDELLKR LQTDDYMQCA VHECYLSCKI IIRNLVKGAR
501: EVVVIRKIFD VINSHISSKK LISELQMKAL PDLYDLFVKL IEYLMDNNAG DFKNVIRCFQ DMLEVVTKDI MEGEFPSMLD SSNGGSNGSH EGIAPLDNQA
601: PLFASTGAII FPYPVSDFWT EKIKRLYLLL TVKESAMDVP TNLEARRRIT FFSNSLFMDM PDAPKAHNML SFSVLTPYYN EDVLFSLNNL EEPNEDGVSI
701: LFYLQKIYPE QWTNFLERVD CKTEEELKAS EELEEELRLW AAYRGQTLTR TVRGMMYNRK ALELQAFLDM AKEEDLMEGY KAAELMSEKH SKLERSLWAK
801: CQAVADMKFT YVVSCQQYGI DKRSGHQRAQ DILKLMRVYP SLRVAYIDEV EVTSTTESRK TYKDYYSVLV KASLSKTDDP SEQVQNLDQV MPFHIFVMNS
901: VCF

Best Arabidopsis Sequence Match ( AT2G31960.1 )
(BLAST)

0001: MAQRKGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS2Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.