Factsheet for GSMUA_Achr8P13500_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027475_P001	Maize	mitochondrion, plastid	49.16	75.4
Os03t0128200-01	Rice	mitochondrion	72.36	63.64
GSMUA_Achr1P15040_001	Banana	mitochondrion	76.79	47.83
GSMUA_Achr1P05560_001	Banana	plasma membrane	46.84	29.48
GSMUA_Achr5P11670_001	Banana	cytosol	16.67	27.05
GSMUA_Achr5P16520_001	Banana	plastid	59.28	24.98
GSMUA_Achr2P04770_001	Banana	mitochondrion, plasma membrane	32.7	18.86
Zm00001d027472_P002	Maize	mitochondrion	75.95	18.5
OQU93328	Sorghum	mitochondrion	75.53	18.32
HORVU4Hr1G082910.11	Barley	mitochondrion	74.89	18.21
TraesCS4B01G321300.2	Wheat	mitochondrion	74.26	18.09
TraesCS4D01G317900.5	Wheat	mitochondrion	74.26	18.02
TraesCS5A01G490800.2	Wheat	mitochondrion	73.84	17.99
GSMUA_Achr7P16080_001	Banana	plasma membrane	59.92	14.62
GSMUA_Achr10P...	Banana	cytosol	61.6	14.55
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane, plastid	48.52	11.66
GSMUA_Achr1P27410_001	Banana	cytosol	19.2	6.36
GSMUA_Achr5P11660_001	Banana	cytosol, peroxisome, plasma membrane	20.89	6.07
GSMUA_Achr4P01160_001	Banana	plastid	7.59	3.57
GSMUA_Achr5P10090_001	Banana	cytosol	0.63	2.86
Os03t0128100-01	Rice	cytosol, plasma membrane	1.69	1.28
GSMUA_Achr8P13480_001	Banana	cytosol	1.69	1.2
GSMUA_Achr5P10080_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	0.42	1.12
GSMUA_Achr2P04760_001	Banana	plasma membrane	2.74	1.11
GSMUA_Achr1P15030_001	Banana	mitochondrion	2.53	1.0
GSMUA_Achr8P13490_001	Banana	plasma membrane	1.9	1.0
GSMUA_Achr5P16530_001	Banana	cytosol	1.9	1.0
GSMUA_Achr1P05550_001	Banana	endoplasmic reticulum, golgi, plasma membrane	2.11	0.78
GSMUA_Achr5P10070_001	Banana	cytosol	0.0	0.0
GSMUA_Achr10P...	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P13500_001	EnsemblPlants:GSMUA_Achr8T13500_001	EnsemblPlantsGene:GSMUA_Achr8G13500_001	Gene3D:1.25.40.270	GO:GO:0003674	GO:GO:0003824
GO:GO:0003843	GO:GO:0016740	InterPro:CALS	InterPro:FKS1-like_dom1	InterPro:IPR023175	InterPro:VPS_Vta1/CALS_N
KEGG:00500+2.4.1.34	PANTHER:PTHR12741	PANTHER:PTHR12741:SF21	PFAM:PF04652	PFAM:PF14288	SEG:seg
SMART:SM01205	UniParc:UPI00029562A3	UniProt:M0TQ53	MapMan:35.1	:	:

Description

Callose synthase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G13500_001]

Coordinates

chr8:-:10256024..10277152

Molecular Weight (calculated)

55218.1 Da

IEP (calculated)

8.953

GRAVY (calculated)

-0.577

Length

474 amino acids

Sequence
(BLAST)

001: MASSRRGAQQ PPARQILRTQ TAGNLGESMF DSEVVPSSLD DIAPILRVAN EVEQEDRRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENDP
101: TLEGRLQKSD ARQMQTFYQQ YYKRYIQELQ NAADKADRAK LFKAYRTAAI LFEVLKAVNL TQSVEVDHEI LEAAHKVEEK KKALGPYNIL PLDPDSASQA
201: IMLYPEIQAA VRALRNTRGL PWPKGHTKKV DEDLLDWLQL MFGFQSVMLS YMQKDNVSNQ REHLVLLLAN VHIRQNPNSD QQPKLDDLAL DHVMKRLFKN
301: YKKWCKYLDR NSSLWLPNIQ QEVQQRKLLY MGLYLLIWGE AANLRFMPEC LCYIYHHMAF ELYGMLAGNV SPMTGENIRP AYGGDEEAFL KKIVTPIYEI
401: IAKEAKKSKS ERSKHSQWRN YDDLNEYFWS VDCFHLGWPM RADADFFCSP QNSRDERNER KTWRSAALSL LVYR

Best Arabidopsis Sequence Match ( AT2G31960.1 )
(BLAST)

0001: MAQRKGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS2Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.