Factsheet for GSMUA_Achr1P15040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P13500_001	Banana	mitochondrion	47.83	76.79
GSMUA_Achr5P16520_001	Banana	plastid	57.16	38.67
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	83.05	32.18
KRH46871	Soybean	mitochondrion	82.13	31.92
KRH01816	Soybean	cytosol	81.34	31.61
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	80.68	31.41
Bra023386.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	80.42	31.34
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	80.16	31.23
CDX69678	Canola	cytosol	80.16	31.19
CDX97217	Canola	cytosol	80.16	31.19
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	80.03	31.17
Solyc01g006370.2.1	Tomato	nucleus	79.63	31.11
PGSC0003DMT400082011	Potato	mitochondrion	79.5	31.06
GSMUA_Achr2P04770_001	Banana	mitochondrion, plasma membrane	33.25	30.78
Bra008864.1-P	Field mustard	cytosol, plastid	75.03	29.59
GSMUA_Achr1P05560_001	Banana	plasma membrane	28.65	28.95
GSMUA_Achr5P11670_001	Banana	cytosol	10.38	27.05
GSMUA_Achr8P13490_001	Banana	plasma membrane	31.67	26.69
GSMUA_Achr7P16080_001	Banana	plasma membrane	55.06	21.56
GSMUA_Achr10P...	Banana	cytosol	56.24	21.33
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane, plastid	49.01	18.91
GSMUA_Achr1P27410_001	Banana	cytosol	22.86	12.17
GSMUA_Achr5P11660_001	Banana	cytosol, peroxisome, plasma membrane	23.78	11.1
GSMUA_Achr4P01160_001	Banana	plastid	12.35	9.33
GSMUA_Achr5P10090_001	Banana	cytosol	0.53	3.81
GSMUA_Achr1P05550_001	Banana	endoplasmic reticulum, golgi, plasma membrane	6.18	3.65
GSMUA_Achr5P10080_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	0.26	1.12
GSMUA_Achr2P04760_001	Banana	plasma membrane	1.58	1.03
GSMUA_Achr1P15030_001	Banana	mitochondrion	0.92	0.59
GSMUA_Achr5P16530_001	Banana	cytosol	0.26	0.22
GSMUA_Achr8P13480_001	Banana	cytosol	0.13	0.15
GSMUA_Achr5P10070_001	Banana	cytosol	0.0	0.0
GSMUA_Achr10P...	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:1.25.40.270	MapMan:35.1	InterPro:CALS	ncoils:Coil	InterPro:FKS1-like_dom1
GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr1G15040_001	EnsemblPlants:GSMUA_Achr1P15040_001	EnsemblPlants:GSMUA_Achr1T15040_001	InterPro:IPR023175	UniProt:M0S012
PFAM:PF04652	PFAM:PF14288	PANTHER:PTHR12741	PANTHER:PTHR12741:SF21	SMART:SM01205	TMHMM:TMhelix
UniParc:UPI000296972E	InterPro:VPS_Vta1/CALS_N	SEG:seg	:	:	:

Description

Callose synthase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G15040_001]

Coordinates

chr1:-:11332536..11344002

Molecular Weight (calculated)

88700.8 Da

IEP (calculated)

9.836

GRAVY (calculated)

-0.219

Length

761 amino acids

Sequence
(BLAST)

001: MSSSRRGPDQ SARGRLLRTQ TAGNLGESIF DSEVVPSSLV EIAPILRVAN EVESQNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENDP
101: TLKGRVQRSD TREMQSFYRD YYKKYIQALQ SAADKADRAQ LTKAYQTAAV LFEVLKAVNQ TQALEVEPEI LETHNEIEEN IKTLGPYNIL PLDPDSANQA
201: IMRYPEIQAA VNALRNIRGL PWPKGHNKKP NEDLLDWLQI MFGFQEDNVS NQREHLILLL ANVHIRQIPK PDQQPKLDER ALTEVMKKLF KNYKKWCKYL
301: NRKSSLWLPT IQQEVQQRKL LYMGLYLLIW GEAANLRFMP ECLCYIYHHM AFELYGMLAG NVSPMTGENI KPAYGGDNEA FLKKVVTPIY HTIAKEAERS
401: KREKSKHSQW RNYDDLNEYF WSVDCFRLGW PMRADADFFC QSPESMHHKK NEDNNQSSSD RWIGKINFVE IRSFWHIFRS FDRMWIFFIL CLQAMTVIAW
501: NDGSPSAIFD AEVFKKVLSI FITAAIMKLG QAVLDVIFSW KARRRMSFPV KLRYILKVIS AAAWVIILSV TYAYSWKNPT GLARTIKSWL GDGQNQPSLY
601: ILAVVIYLSP NMLAALLFLF PFLRRFLERS NYKIITLMMW WSQPRLYVGR GMHESSWSLF KYTMFWVLLI VTKLAFSYYI EIKPLVNPTK DIMRERITTF
701: KWHEFFPKAN NNIGVVIALW APIILVYFMD TQIWYAIFST LIGGIYGACR RLGEVRNCKL S

Best Arabidopsis Sequence Match ( AT2G31960.1 )
(BLAST)

0001: MAQRKGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE

Arabidopsis Description

CALS2Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.