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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • plastid 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, extracellular, mitochondrion, plasma membrane, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:cytosol
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH01816 Soybean cytosol 98.21 98.21
VIT_06s0004g01270.t01 Wine grape cytosol, mitochondrion, nucleus, plasma membrane 87.28 87.02
Zm00001d018565_P002 Maize cytosol 28.45 85.69
AT5G13000.1 Thale cress cytosol, mitochondrion, nucleus, plasma membrane 85.5 85.63
Bra023386.1-P Field mustard cytosol, mitochondrion, nucleus, plasma membrane 85.39 85.61
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 85.29 85.51
CDX91152 Canola cytosol, mitochondrion, nucleus, plasma membrane 85.14 85.31
CDX69678 Canola cytosol 84.93 85.02
CDX97217 Canola cytosol 84.88 84.97
Zm00001d014865_P001 Maize cytosol 26.66 84.88
PGSC0003DMT400082011 Potato mitochondrion 84.22 84.65
Solyc01g006370.2.1 Tomato nucleus 84.12 84.55
Bra008864.1-P Field mustard cytosol, plastid 82.99 84.2
Os02t0832500-01 Rice plasma membrane 13.28 83.6
Os03t0128100-01 Rice cytosol, plasma membrane 26.51 82.91
Os06t0728800-01 Rice plasma membrane 11.59 82.25
GSMUA_Achr1P15040_001 Banana mitochondrion 31.92 82.13
KRH36298 Soybean plasma membrane 6.84 78.82
GSMUA_Achr1P15030_001 Banana mitochondrion 47.91 78.49
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 76.76 77.0
KRH43561 Soybean mitochondrion 76.3 76.73
EER90434 Sorghum plastid 76.92 76.64
Zm00001d036351_P098 Maize plastid 76.81 76.62
KRH13867 Soybean mitochondrion 76.15 76.54
Os03t0128200-01 Rice mitochondrion 20.94 76.07
TraesCS7B01G480300.1 Wheat plastid 75.38 75.23
TraesCS7D01G554900.1 Wheat plastid 75.49 75.18
TraesCS7A01G555700.1 Wheat plastid 75.23 75.15
Zm00001d027475_P001 Maize mitochondrion, plastid 11.85 75.08
TraesCS6B01G468200.1 Wheat golgi, unclear 75.54 75.04
TraesCS6D01G405600.1 Wheat plastid 75.43 75.01
Os02t0832400-02 Rice nucleus, peroxisome, plasma membrane, plastid 36.01 74.92
TraesCS6A01G420100.1 Wheat plastid 75.49 74.84
Os06t0728902-01 Rice plastid 7.3 74.48
Zm00001d018560_P002 Maize plastid 22.93 74.21
Zm00001d027472_P002 Maize mitochondrion 73.6 74.05
OQU93328 Sorghum mitochondrion 73.85 74.0
TraesCS4B01G321300.2 Wheat mitochondrion 72.27 72.71
TraesCS5A01G490800.2 Wheat mitochondrion 72.22 72.66
TraesCS4D01G317900.5 Wheat mitochondrion 72.37 72.56
KRG93040 Soybean plasma membrane 29.88 71.96
Zm00001d014867_P001 Maize plastid 40.04 71.27
Zm00001d018562_P003 Maize golgi 20.79 68.98
Zm00001d014866_P002 Maize cytosol, extracellular 5.98 67.24
KRH53895 Soybean cytosol 27.17 65.04
KRH59571 Soybean cytosol 61.59 61.59
KRH43553 Soybean mitochondrion, plastid 59.65 61.34
KRH64044 Soybean plastid 60.88 61.1
KRH46038 Soybean cytosol 54.09 57.27
KRG98933 Soybean cytosol, plastid 55.72 56.88
KRH55958 Soybean plasma membrane 22.37 53.74
KRH46028 Soybean cytosol 50.77 53.24
KRH21823 Soybean cytosol 53.01 52.82
KRH13524 Soybean cytosol 52.91 52.72
KRH08806 Soybean extracellular 1.63 52.46
KRG98945 Soybean cytosol 52.2 52.2
KRH54243 Soybean endoplasmic reticulum 40.7 49.6
KRH63708 Soybean endoplasmic reticulum 40.3 49.59
KRH00819 Soybean cytosol, extracellular 1.99 48.15
KRH21444 Soybean mitochondrion 35.55 48.13
KRH22386 Soybean cytosol, plasma membrane, plastid 41.52 46.64
KRH10873 Soybean plasma membrane 42.49 46.25
KRG93041 Soybean mitochondrion 44.74 45.98
KRH36300 Soybean cytosol 44.13 45.33
KRH25579 Soybean golgi, mitochondrion, plasma membrane 7.61 43.44
KRH25578 Soybean mitochondrion 10.62 43.06
KRH46035 Soybean cytosol, plastid 1.53 42.25
KRG94407 Soybean extracellular 1.58 36.47
KRH55582 Soybean extracellular, plasma membrane 1.33 30.95
KRH63709 Soybean cytosol 4.6 29.22
KRH54242 Soybean cytosol 4.19 27.89
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270EntrezGene:100801607MapMan:21.7.1EMBL:ACUP02005362InterPro:CALS
ncoils:CoilInterPro:FKS1-like_dom1EnsemblPlantsGene:GLYMA_08G361500GO:GO:0000148GO:GO:0003674GO:GO:0003824
GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740InterPro:Glyco_trans_48UniProt:I1KZH4InterPro:IPR023175EnsemblPlants:KRH46871ProteinID:KRH46871
ProteinID:KRH46871.1PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741PANTHER:PTHR12741:SF21
MetaCyc:PWY-6773SMART:SM01205TMHMM:TMhelixUniParc:UPI0002337DD7InterPro:VPS_Vta1/CALS_NSEG:seg
Description
hypothetical protein
Coordinates
chr8:-:47299381..47323334
Molecular Weight (calculated)
225724.0 Da
IEP (calculated)
9.465
GRAVY (calculated)
-0.108
Length
1958 amino acids
Sequence
(BLAST)
0001: MSSSRGGAGP SSEAPPPRRI MRTQTAGNLG ESVIDSEVVP SSLVEIAPIL RVANEVEKTH PRVAYLCRFY AFEKAHRLDP NSSGRGVRQF KTALLQRLER
0101: ENDPTLKGRV KKSDAREMQS FYQHYYKKYI QALQNAADKA DRAQLTKAYN TANVLFEVLK AVNMTQSMEV DREILETQDK VAEKTEILVP YNILPLDPDS
0201: ANQAIMRFPE IQAAVYALRN TRGLPWPKDF KKKKDEDILD WLGSMFGFQK HNVANQREHL ILLLANVHIR QFPKPDQQPK LDERALTEVM KKLFKNYKKW
0301: CKYLGRKSSL WLPTIQQEVQ QRKLLYMGLY LLIWGEAANL RFMPECLCYI YHHMAFELYG MLAGNVSPMT GENVKPAYGG EDEAFLRKVV TPIYNVIAKE
0401: AARSKKGRSK HSQWRNYDDL NEYFWSADCF RLGWPMRADA DFFCLPAEKL VFDKSNDDKP PSRDRWVGKV NFVEIRSFWH MFRSFDRMWS FFILCLQAMI
0501: VVAWNGSGDP SAIFNGDVFK KVLSVFITAA ILKFGQAVLD VILSWKAQWS MSLYVKLRYI LKVVSAAAWV IVLSVTYAYT WDNPPGFAQT IKSWFGSGGS
0601: SAPSLFILAV VVYLSPNMLA AIFFLIPFIR RHLERSNYRI VMLMMWWSQP RLYVGRGMHE SAFSLFKYTM FWVLLIITKL AFSYYIEIKP LVGPTKAIMS
0701: VKITTFQWHE FFPHARNNIG VVIALWAPII LVYFMDTQIW YAIFSTLFGG IYGAFRRLGE IRTLGMLRSR FQSLPGAFNA SLIPEETNEP KKKGLKATLS
0801: RRFPEISSNK GKEAARFAQL WNQIITSFRD EDLINDREMN LLLVPYWADT QLDLIQWPPF LLASKIPIAL DMAKDSNGKD RELKKRIAAD NYMSCAVREC
0901: YASFKSIIKH LVQGEREIPV IEYMFDEVDK NIETDKLISE FRMSALPSLY AQFVELTQYL LNNDPKDRDN VVILFQDMLE VVTRDIMMED QDQIFSLVDS
1001: SHGGTGHEGM LHLEPEPHHQ LFASEGAIKF PIEPLTAAWT EKIKRLHLLL TTKESAMDVP SNLEARRRIS FFSNSLFMDM PMAPKVRNML SFSVLTPYYT
1101: EEVLFSLHDL DSQNEDGVSI LFYLQKIYPD EWNNFLERVK STEEDIKGSE FDELVEERRL WASYRGQTLT RTVRGMMYYR KALELQAFLD MAKDEDLMEG
1201: YKAMENSDDN SRGERSLWTQ CQAVADMKFT YVVSCQQYGI DKRSGSLRAQ DILRLMTRYP SLRVAYIDEV EEPVQDSKKK INKVYYSCLV KAMPKSNSPS
1301: EPEQNLDQII YKIKLPGPAI LGEGKPENQN HAIIFTRGEG LQTIDMNQDN YMEEALKMRN LLQEFLKKHD GVRFPSILGL REHIFTGSVS SLAWFMSNQE
1401: TSFVTIGQRL LANPLKVRFH YGHPDVFDRL FHLTRGGVSK ASKVINLSED IFAGFNSTLR EGNVTHHEYI QVGKGRDVGL NQISMFEAKI ANGNGEQTLS
1501: RDVYRLGHRF DFFRMLSCYF TTVGFYFSTL ITVLTVYVFL YGRLYLVLSG LEEGLSTQKA IRDNKPLQVA LASQSFVQIG VLMALPMLME IGLERGFRTA
1601: LSEFILMQLQ LAPVFFTFSL GTKTHYFGRT LLHGGAKYRP TGRGFVVFHA KFADNYRLYS RSHFVKGIEL MILLVVYEIF GHSYRSTVAY ILITASMWFM
1701: VGTWLFAPFL FNPSGFEWQK IVDDWTDWNK WISNRGGIGV LPEKSWESWW EEEQEHLQYS GMRGIIVEIL LSLRFFIYQY GLVYHLNITK KGTKSFLVYG
1801: ISWLVIFVIL FVMKTVSVGR RKFSANFQLV FRLIKGMIFL TFVSILVILI ALPHMTVQDI VVCILAFMPT GWGMLQIAQA LKPVVRRAGF WGSVKTLARG
1901: YEIVMGLLLF TPVAFLAWFP FVSEFQTRML FNQAFSRGLQ ISRILGGQRK ERSSRNKE
Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE
Arabidopsis Description
CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.