Factsheet for PGSC0003DMT400082011

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006370.2.1	Tomato	nucleus	99.02	99.02
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	87.37	86.66
KRH01816	Soybean	cytosol	84.96	84.53
KRH46871	Soybean	mitochondrion	84.65	84.22
Bra023386.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	84.09	83.87
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	84.03	83.82
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	84.09	83.79
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	83.83	83.57
CDX69678	Canola	cytosol	83.83	83.49
CDX97217	Canola	cytosol	83.83	83.49
Zm00001d018565_P002	Maize	cytosol	27.77	83.23
Zm00001d014865_P001	Maize	cytosol	26.18	82.93
Bra008864.1-P	Field mustard	cytosol, plastid	81.83	82.59
PGSC0003DMT400074555	Potato	plasma membrane	19.1	81.05
Os03t0128100-01	Rice	cytosol, plasma membrane	25.87	80.51
GSMUA_Achr1P15040_001	Banana	mitochondrion	31.06	79.5
GSMUA_Achr1P15030_001	Banana	mitochondrion	47.84	77.99
Os06t0728800-01	Rice	plasma membrane	10.99	77.54
Os02t0832500-01	Rice	plasma membrane	12.37	77.49
Zm00001d027475_P001	Maize	mitochondrion, plastid	12.22	77.02
EER90434	Sorghum	plastid	77.21	76.54
Os03t0128200-01	Rice	mitochondrion	21.15	76.44
Zm00001d036351_P098	Maize	plastid	77.0	76.41
OQU86033	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	76.33	76.18
TraesCS7B01G480300.1	Wheat	plastid	76.49	75.94
TraesCS7D01G554900.1	Wheat	plastid	76.59	75.89
TraesCS7A01G555700.1	Wheat	plastid	76.33	75.87
TraesCS6D01G405600.1	Wheat	plastid	75.77	74.96
TraesCS6B01G468200.1	Wheat	golgi, unclear	75.82	74.94
TraesCS6A01G420100.1	Wheat	plastid	75.62	74.58
Os02t0832400-02	Rice	nucleus, peroxisome, plasma membrane, plastid	35.83	74.18
Os06t0728902-01	Rice	plastid	7.29	73.96
Zm00001d027472_P002	Maize	mitochondrion	73.41	73.48
OQU93328	Sorghum	mitochondrion	73.61	73.39
Zm00001d018560_P002	Maize	plastid	22.59	72.73
TraesCS4B01G321300.2	Wheat	mitochondrion	72.38	72.46
TraesCS5A01G490800.2	Wheat	mitochondrion	72.38	72.46
TraesCS4D01G317900.5	Wheat	mitochondrion	72.54	72.35
Zm00001d014867_P001	Maize	plastid	40.76	72.18
Zm00001d018562_P003	Maize	golgi	20.94	69.15
PGSC0003DMT400018166	Potato	cytosol	7.08	67.65
PGSC0003DMT400073787	Potato	plasma membrane	37.06	66.36
Zm00001d014866_P002	Maize	cytosol, extracellular	5.9	66.09
PGSC0003DMT400034375	Potato	cytosol, mitochondrion, peroxisome, plasma membrane	18.48	64.86
PGSC0003DMT400082009	Potato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	31.31	53.14
PGSC0003DMT400039392	Potato	plasma membrane	31.93	52.71
PGSC0003DMT400018165	Potato	cytosol, peroxisome, plasma membrane	29.26	47.26
PGSC0003DMT400047243	Potato	cytosol	42.35	46.66
PGSC0003DMT400076360	Potato	plasma membrane	41.53	45.81
PGSC0003DMT400065769	Potato	nucleus, plasma membrane, vacuole	3.08	39.47

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:1.25.40.270	EntrezGene:102590545	MapMan:21.7.1	InterPro:CALS	ncoils:Coil
InterPro:FKS1-like_dom1	GO:GO:0000148	GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0006075	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_48
InterPro:IPR023175	UniProt:M1D5G6	PFAM:PF02364	PFAM:PF04652	PFAM:PF14288	EnsemblPlantsGene:PGSC0003DMG400032202
PGSC:PGSC0003DMG400032202	EnsemblPlants:PGSC0003DMT400082011	PANTHER:PTHR12741	PANTHER:PTHR12741:SF21	SMART:SM01205	TMHMM:TMhelix
UniParc:UPI000294A95C	InterPro:VPS_Vta1/CALS_N	RefSeq:XP_006354196.1	RefSeq:XP_006354197.1	RefSeq:XP_015167171.1	RefSeq:XP_015167172.1
SEG:seg	:	:	:	:	:

Description

Callose synthase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400032202]

Coordinates

chr1:-:1895208..1918478

Molecular Weight (calculated)

225243.0 Da

IEP (calculated)

9.393

GRAVY (calculated)

-0.106

Length

1948 amino acids

Sequence
(BLAST)

0001: MASRGGPEPS LQRRITRTQT MGNIGESMID SEVVPSSLAE IAPILRVANE VEPSNPRVAY LCRFYAFEKA HRLDPTSSGR GVRQFKTSLL QRLERENDPT
0101: LIGRVKKSDA REMQSFYQHY YKKYIQALQN AAEKADRAQL TKAYQTANVL FEVLKAVNQT QAVEVDREIL EAHDKVAEKT QILVPYNILP LDPDSVNQAI
0201: MRFPEVQAAV YALRNTRGLP WPKDYKKKKD EDILDWLQAM FGFQKDSVAN QREHLILLLA NVHIRQYPKP DQQPKLDERA LNEVMKKLFK NYKKWCKYLD
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFMPE CLCYIYHHMA FELYGMLAGN VSPMTGENVK PAYGGEEEAF LRKVVTPIYE VIAREAARSR
0401: RGKAKHSQWR NYDDLNEYFW SVDCFRLGWP MRADADFFCL PVDVEQAERN GDNKALSDRW LGKVNFVEIR SYLHIFRSFD RMWSFFILCL QAMIIIAWNG
0501: SGDLSMVFTS NVFKKVLSVF ITAAVLKLGQ ATLDVMLNWK ARRSMSFYVK LRYILKVISA AAWVIILPVT YAYTWENPPP FAQAIRNWFG SNSDSPSLFI
0601: LAVVIYLSPN MLAALLFLFP FVRRFLERSH YKIVMLMMWW SQPRLYVGRG MHESTFSLFK YTMFWVLLIA TKLAFSFYVE IKPLVEPTKK IMNVHITIYQ
0701: WHEFFPHASS NVGVVIALWA PVILVYFMDA QIWYAIFSTI FGGIYGAFRR LGEIRTLGML RSRFQSLPGA FNACLIPEEK SEQPKKKGLK ATFSRNFARV
0801: PSNKEKEAAR FAQLWNKIIT SFREEDLISN REMDLLLVPY WADRELDLVQ WPPFLLASKI PIAVDMAKDS NGKDRELKKR IEADPYMSSA VCECYASFRN
0901: VIKVLVSGRR EKEVIEYIFS EVDKHIEAGN LISEYKMSAL PSLYDLFVKL IKFLLENRQE DRDQVVLLFQ DMLEVVTRDI MMEDQLSSLV DSIHGAPGYE
1001: GMIPLDQQYQ LFASAGAIKF PPPESEAWKE KIKRLYLLLT VKESAMDVPS NLEARRRISF FSNSLFMDMP TAPKVRNMLS FSVLTPYYTE EVLFSSDDLD
1101: KQNEDGVSIL FYLQKIYPDE WNNFLERADC TSEDDLRFKW SSELEENLRH WASYRGQTLT RTVRGMMYYR RALELQAFLD MAQDDDLMEG YKAIELNEDQ
1201: MKGERSLWAQ CQAVADMKFT YVVSCQLYGI HKRSGDQRAQ DILRLMTTYP SMRVAYIDEI EEPSKDRSKK VNPKAYYSTL VKAALPNSHS TEPGQNLDQV
1301: IYRIKLPGPA ILGEGKPENQ NHAIIFTRGE GLQTIDMNQD NYMEEALKVR NLLQEFLKKH DGVRFPTILG LREHIFTGSV SSLAWFMSNQ ETSFVTIGQR
1401: LLANPLKVRF HYGHPDIFDR LFHLTRGGIS KASKIINLSE DIFAGFNSTL REGNVTHHEY IQVGKGRDVG LNQISLFEAK IANGNGEQTL SRDLYRLGHR
1501: FDYFRMLSCY FTTIGFYFST LITVLTVYVF LYGRLYLVLS GLEEGLSNEP AIKDNKPLQV ALASQSFVQI GFLMALPMMM EIGLEKGFRT ALSEFILMQL
1601: QLAPVFFTFS LGTKTHYYGR TLLHGGAKYR PTGRGFVVFH AKFADNYRFY SRSHFVKGLE LMILLLVYQI FGQEYRGAVA YILITVSMWF MVGTWLFAPF
1701: LFNPSGFEWQ KIVDDWTDWN KWISNRGGIG VPPEKSWESW WEEEQEHLRH SGIRGIVAEI LLSLRFFIYQ YGLVYHLKIT LKNQSFLVYG ASWLVIILVL
1801: FVMKTISVGR RKFSANLQLV FRLIKGLIFL AFVATLVILM TLLQMTPKDM VVCILAFLPT GWGMLLIAQA LKPVVRRAGF WGSVRTLARG YEIVMGLLLF
1901: TPVAFLAWFP FVSEFQTRML FNQAFSRGLQ ISRILGGQRK DRSSRNKD

Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)

0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE

Arabidopsis Description

CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.