Factsheet for PGSC0003DMT400018165

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16520_001	Banana	plastid	41.79	44.8
PGSC0003DMT400082011	Potato	mitochondrion	47.26	29.26
TraesCS7A01G146200.1	Wheat	cytosol	45.19	28.64
TraesCS7B01G048700.1	Wheat	plastid	45.69	28.27
TraesCS7D01G147700.1	Wheat	plastid	45.52	28.15
HORVU7Hr1G029930.1	Barley	cytosol, plastid	43.7	27.48
GSMUA_Achr7P16080_001	Banana	plasma membrane	43.62	27.07
KXG40423	Sorghum	mitochondrion	31.76	26.99
Os06t0182300-01	Rice	plasma membrane	42.21	26.65
GSMUA_Achr10P...	Banana	cytosol	43.7	26.26
PGSC0003DMT400076360	Potato	plasma membrane	30.1	20.55
Zm00001d035841_P002	Maize	cytosol, golgi, plasma membrane, plastid	22.64	20.3
PGSC0003DMT400047243	Potato	cytosol	28.36	19.34
PGSC0003DMT400039392	Potato	plasma membrane	13.93	14.24
PGSC0003DMT400073787	Potato	plasma membrane	12.6	13.97
PGSC0003DMT400082009	Potato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	12.6	13.24
PGSC0003DMT400065769	Potato	nucleus, plasma membrane, vacuole	1.33	10.53
GSMUA_Achr5P16530_001	Banana	cytosol	3.57	4.76
PGSC0003DMT400034375	Potato	cytosol, mitochondrion, peroxisome, plasma membrane	0.66	1.44
PGSC0003DMT400074555	Potato	plasma membrane	0.5	1.31
OQU93478	Sorghum	plasma membrane	0.17	0.67
PGSC0003DMT400018166	Potato	cytosol	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:1.25.40.270	MapMan:50.2.4	ncoils:Coil	InterPro:FKS1-like_dom1	GO:GO:0000148
GO:GO:0003674	GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0006075	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_48	InterPro:IPR023175	UniProt:M1AA51
PFAM:PF02364	PFAM:PF04652	PFAM:PF14288	EnsemblPlantsGene:PGSC0003DMG401007052	PGSC:PGSC0003DMG401007052	EnsemblPlants:PGSC0003DMT400018165
PANTHER:PTHR12741	PANTHER:PTHR12741:SF22	SMART:SM01205	TMHMM:TMhelix	UniParc:UPI000294B4D6	InterPro:VPS_Vta1/CALS_N
SEG:seg	:	:	:	:	:

Description

Callose synthase 8 [Source:PGSC_GENE;Acc:PGSC0003DMG401007052]

Coordinates

chr7:+:52129504..52137685

Molecular Weight (calculated)

139720.0 Da

IEP (calculated)

6.694

GRAVY (calculated)

-0.085

Length

1206 amino acids

Sequence
(BLAST)

0001: MAEIVLAEPI QESTASTSRR AYTTSNERPY TRSITYGRDH VPEPFDSEKL PVTLISEIQR FLRVANLIES EEPRVAYLCR FHAFEVAHNL DRNSNGRGVR
0101: QFKTALLQRL EQDEEVTLRK RKERTDLREL RRAYREYKDF IIKHGGESNL ENRERLTKAR VVASVLFEVL DTVSRAAGVQ AGSESSDAKS ELFVSYNILP
0201: LDQGGIHHAI MQLPEVKIAV AAVRDVRGLP FLEDCRKQET NLDLFKWLQF CFGFQKGNVA NQREHLILLL ANTHVRQTQK QVLVPKLGDV AVDELMKKFF
0301: KNYTDWCKFL GRKSNIRVPY LKQEAQQYKL LYIALYLLIW GEAANLRFMP ECLCYMFHHM AYELHSMLTG AISMTTGEKV IPAYQGDSES FLNNVVFPVY
0401: DVIYKEAMKN GKGTADHSTW RNYDDLNEFF WSPDCFQIGW PMRLDHDFFC IETPNNVKVK KEKASASDLQ ENKDANEDEE MGILVDEVRE PKWLGKTNFV
0501: EIRSFWQIFR CFDRMWSFFI LSLQAMIIMA SHDLESPLQV FDATVLEDVM SIFITSAVLK LVNVILDIIF TWKARCTIDP NQTLKHVLRV VVAMMWTIIL
0601: PVYYASSRKK YTCYSTQSGS WLGEWCYSSY MVAVAFYLMT NAVDMVLFFV PVVGKYIETS NYRICMFLSW WTQPKLYVGR GMQESQLSLL KYTIFWLFLL
0701: ISKLIFSYTF EIKPLISPTR QIMAIGVKNY DWHELFPKVK SNAGALAAIW APIVLVYFMD AQIWYSVYCA VFGGVYGILQ HLGEIRTLGM LRSRFYSLPE
0801: AFSDRLVPPE AKDSRNTLMN WLIPLTFQFQ KNFHLSEREK SNVVKFALVW NQIISSFREE DVISDREMDL MKIPVSPELL SGRVYWPIFL LADKLANALS
0901: IARDFEGKDE TLLRTIKKDT YMFMVVIECY ESLKYILEIL VVGDLERRVI SGILDEIDES IQKSTLLKDL KMSQLPVLCA KCITLLQLLV EGNESLHNKV
1001: VLAIQDIFEL VTTDMMLNGS RTLESLNVHL HSGEEVVEYF VSIEAPLFAS KDSIHFPLPD SDSLLEKIKR FRLLLTVKDK ALDIPTNLEA RRRICFFATS
1101: LSMNMPNAPK VRNMLSFSVL TPHFMEEVKF SKKELNSRKQ AGVSILFYMK KIFPDEWENF LERMEKEGID ESSDEIEEEE RNWASFRGQT LSRTGGFIFP
1201: LKVISI

Best Arabidopsis Sequence Match ( AT3G14570.1 )
(BLAST)

0001: MSHEIVPVDP IDVPSTSYSR PILGPREDSP ERATEFTRSL TFREHVSSEP FDSERLPATL ASEIQRFLRI ANLVESEEPR IAYLCRFHAF EIAHHMDRNS
0101: TGRGVRQFKT SLLQRLELDE EFTVRRRKEK SDVRELKRVY HAYKEYIIRH GAAFNLDNSQ REKLINARRI ASVLYEVLKT VTSGAGPQAI ADRESIRAKS
0201: EFYVPYNILP LDKGGVHQAI MHLPEIKAAV AIVRNTRGLP PPEEFQRHQP FLDLFEFLQY AFGFQNGNVA NQREHLILLL SNTIIRQPQK QSSAPKSGDE
0301: AVDALMKKFF KNYTNWCKFL GRKNNIRLPY VKQEALQYKT LYIGLYLLIW GEASNLRFMP ECLCYIFHHM AYELHGVLTG AVSMITGEKV APAYGGGHES
0401: FLADVVTPIY MVVQKEAEKN KNGTADHSMW RNYDDLNEFF WSLECFEIGW PMRPEHDFFC VESSETSKPG RWRGMLRFRK QTKKTDEEIE DDEELGVLSE
0501: EQPKPTSRWL GKTNFVETRS FWQIFRSFDR MWSFFVLSLQ ALIIMACHDV GSPLQVFNAN IFEDVMSIFI TSAILKLIKG ILDIIFKWKA RNTMPINEKK
0601: KRLVKLGFAA MWTIILPVLY SHSRRKYICY FTNYKTWLGE WCFSPYMVAV TIYLTGSAIE LVLFFVPAIS KYIETSNHGI FKTLSWWGQP RLYVGRGMQE
0701: TQVSQFKYTF FWILVLLTKF AFSYAFEIKP LIEPTRLIMK VGVRNYEWHE IFPEVKSNAA AIVAVWAPIM VVYFMDTQIW YSVYCTIFGG LYGVLHHLGE
0801: IRTLGMLRGR FHTLPSAFNA SLIPHSTKDE KRRKQRGFFP FNLGRGSDGQ KNSMAKFVLV WNQVINSFRT EDLISNKELD LMTMPLSSEV LSGIIRWPIF
0901: LLANKFSTAL SIAKDFVGKD EVLYRRIRKD EYMYYAVKEC YESLKYILQI LVVGDLEKKI ISGIINEIEE SIRQSSLLEE FKMAELPALH DKCIELVQLL
1001: VEGSAEQLQV EKSEELHGKL VKALQDIFEL VTNDMMVHGD RILDLLQSRE GSGEDTGIFM RVIEPQLFES YGEWRCIHFP LPDSASLSEQ IQRFLLLLTV
1101: KDSAMDIPEN LDARRRLSFF ATSLFMDMPD APKVRNMMSF SVLTPHYQED INYSTNELHS TKSSVSIIFY MQKIFPDEWK NFLERMGCDN LDALKKEGKE
1201: EELRNWASFR GQTLSRTVRG MMYCREALKL QAFLDMADDE DILEGYKDVE RSNRPLAAQL DALADMKFTY VVSCQMFGAQ KSSGDPHAQD ILDLMIKYPS
1301: LRVAYVEERE EIVLDVPKKV YYSILVKAVN GFDQEIYRVK LPGPPNIGEG KPENQNHAIV FTRGEALQTI DMNQDHYLEE AFKMRNLLQE FLRNRGRRPP
1401: TILGLREHIF TGSVSSLAWF MSYQETSFVT IGQRLLANPL RVRFHYGHPD VFDRIFHITR GGISKSSRTI NLSEDVFAGY NTTLRRGCIT YNEYLQVGKG
1501: RDVGLNQISK FEAKVANGNS EQTISRDIYR LGQRFDFFRM LSCYFTTIGF YFSSLISVIG IYIYLYGQLY LVLSGLQKTL ILEAKVKNIK SLETALASQS
1601: FIQLGLLTGL PMVMEIGLEK GFLIAFQDFI LMQLQLAAFF FTFSLGTKTH YFGRTILHGG AKYRPTGRKV VVFHANFSEN YRLYSRSHFI KGFELMILLV
1701: VYELFKHTSQ SNMAYSFITF SVWFMSFTWL CAPFLFNPSG FTWEIIVGDW RDWNRWIKEQ GGIGIQQDKS WQSWWNDEQA HLRGSGVGAR CLEIILSLRF
1801: FVYQYGLVYH LDITQSNTNI IVYALSWVVI LATFFTVKAV DLGRQLFSTR KHLVFRFFKV FVFVSILTII ITLANICHLS VKDLLVSCLA FLPTGWGLIL
1901: IAQAVRPKIE GTSLWEFTQV LARAYDYGMG VVLFAPMAIL AWLPIISAFQ TRFLFNEAFN RRLQIQPILA GKKKNR

Arabidopsis Description

CALS8Putative callose synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.