CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
extracellular 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014865_P001	Maize	cytosol	30.84	98.54
Zm00001d014867_P001	Maize	plastid	53.18	95.0
Os06t0728800-01	Rice	plasma membrane	13.33	94.93
Os06t0728902-01	Rice	plastid	9.11	93.23
HORVU7Hr1G120960.14	Barley	cytosol	86.97	90.62
TraesCS7B01G480300.1	Wheat	plastid	89.82	89.96
TraesCS7D01G554900.1	Wheat	plastid	89.82	89.78
TraesCS7A01G555700.1	Wheat	plastid	89.47	89.69
OQU86033	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	84.78	85.35
Zm00001d014866_P002	Maize	cytosol, extracellular	7.28	82.18
PGSC0003DMT400074555	Potato	plasma membrane	18.07	77.34
VIT_06s0004g01270.t01	Wine grape	cytosol, mitochondrion, nucleus, plasma membrane	77.2	77.24
PGSC0003DMT400082011	Potato	mitochondrion	76.54	77.21
Solyc01g006370.2.1	Tomato	nucleus	76.39	77.05
KRH46871	Soybean	mitochondrion	76.64	76.92
KRH01816	Soybean	cytosol	76.54	76.81
AT5G13000.1	Thale cress	cytosol, mitochondrion, nucleus, plasma membrane	76.34	76.73
Bra023386.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	76.23	76.7
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	76.23	76.7
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	76.08	76.51
CDX97217	Canola	cytosol	76.08	76.43
CDX69678	Canola	cytosol	76.08	76.43
Bra008864.1-P	Field mustard	cytosol, plastid	74.2	75.54
Solyc01g073750.2.1	Tomato	nucleus	68.45	74.81
VIT_13s0156g00210.t01	Wine grape	mitochondrion	73.13	73.84
KRH43561	Soybean	mitochondrion	73.03	73.7
AT2G31960.3	Thale cress	cytosol	73.08	73.64
CDY42084	Canola	cytosol, nucleus, plasma membrane	71.91	73.59
AT1G05570.1	Thale cress	cytosol, mitochondrion, plasma membrane	72.98	73.54
KRH13867	Soybean	mitochondrion	72.67	73.31
OQU93328	Sorghum	mitochondrion	72.77	73.18
CDY12242	Canola	mitochondrion	72.01	73.09
Bra005624.1-P	Field mustard	cytosol, nucleus, plasma membrane	72.32	72.69
Bra015436.1-P	Field mustard	mitochondrion	71.55	72.55
CDY47273	Canola	plasma membrane	61.98	72.07
CDY10125	Canola	mitochondrion	71.09	71.94
CDY67378	Canola	cytosol	15.37	64.53
KRG93040	Soybean	plasma membrane	26.56	64.21
Bra005620.1-P	Field mustard	cytosol	15.11	63.33
CDY42080	Canola	cytosol	15.06	63.11
OQU75971	Sorghum	cytosol	60.25	62.15
CDY12248	Canola	cytosol	4.68	61.74
AT5G36870.1	Thale cress	cytosol, mitochondrion, plasma membrane	58.52	61.46
CDX72782	Canola	cytosol	3.1	59.22
OQU93478	Sorghum	plasma membrane	8.8	57.86
EES03079	Sorghum	plasma membrane, plastid	53.99	54.86
EES03083	Sorghum	cytosol	49.57	52.96
KXG29910	Sorghum	cytosol	52.21	51.51
KXG33086	Sorghum	cytosol	42.14	46.54
KXG33388	Sorghum	mitochondrion	41.78	45.87
KXG40330	Sorghum	cytosol	43.61	44.87
KXG40423	Sorghum	mitochondrion	29.82	41.3

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:1.25.40.270	MapMan:21.7.1	EntrezGene:8066386	UniProt:C5Z2K6	ncoils:Coil
EnsemblPlants:EER90434	ProteinID:EER90434	ProteinID:EER90434.1	InterPro:FKS1-like_dom1	GO:GO:0000148	GO:GO:0003674
GO:GO:0003824	GO:GO:0003843	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975
GO:GO:0006075	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_48	InterPro:IPR023175	PFAM:PF02364	PFAM:PF04652
PFAM:PF14288	PANTHER:PTHR12741	PANTHER:PTHR12741:SF17	MetaCyc:PWY-6773	SMART:SM01205	EnsemblPlantsGene:SORBI_3010G275800
TMHMM:TMhelix	UniParc:UPI0001A898D7	InterPro:VPS_Vta1/CALS_N	RefSeq:XP_002439067.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:60885882..60900982

Molecular Weight (calculated)

226634.0 Da

IEP (calculated)

9.370

GRAVY (calculated)

-0.093

Length

1965 amino acids

Sequence
(BLAST)

0001: MAAPGRRTAD VSSSSPAPSP SPAAPSSTGR RLLRTQTVGN LGESIFDSEV VPSSLVEIAP ILRVANEVEA TNPRVAYLCR FYAFEKAHRL DPTSSGRGVR
0101: QFKTALLQRL ERENDPTLKG RVHQSDAREM QRFYREYYKK YIQALQNAAD KADRALLTKA YQTAAVLFEV LRAVNVSQSV EVDQAILDTH NKVEEKKKLF
0201: LPCNILPLDP ESTGQAIMLY PEIQAAVYAL RNTRGLPWPK DQDKKPDEKN TGKDLLDWLQ AMFGFQKDNV SNQREHLILL LANVHIRKIP KADLQPKLDD
0301: KALDDVMKKL FKNYKKWCKY LGRKSSLWLP TIQQEVQQRK LLYMGLYLLI WGEAANLRFM PECICYIYHH MAFELYGMLA GNVSPMTGEN VKPAYGGDEE
0401: AFLMKVVTPI YKVIEKEAER SKTMKSKHSH WRNYDDLNEY FWSVDCFRLG WPMRADADFF KTPKDAYPNL LNGENRSAGN VHWMGKVNFV EIRSFWHIFR
0501: SFDRMWIFLI LSLQAMIIIA WNGGTPSDIF DAGVFKKVLS IFITAAILKL GQAILDLVFG WKARRSMSFA VKLRYVLKLI SAAAWVVILP VTYAYTWENP
0601: TGLARTIKSW LGDGQNQPSL YILAIVIYMA PNILASMLFL FPFMRRFLES SNVKVITIMM WWSQPRLFVG RGMHEGAFSL FKYTMFWIIL LAMKLIVSFY
0701: IEIKPLVQPT KDIMREPIRT FQWHEFFPHG TNNIGVVISL WAPIILVYFM DTQIWYALFS TLIGGIYGAY RRLGEIRTLG MLRSRFESLP EAFNERLIPS
0801: DANKSKGLRA AFLSRPKVPG DEREREKRAA RFAQMWNVII TSFREEDLID NREMDLLLVP YCKDRELDIF QWPPFLLASK IPIALDMAAD SGGKDRDLTK
0901: RIKSDPYFSF AIRECYASFK NIINTLVFGQ REKDVLAKIF TVVDEHIEDG TLIKDLNMRN LPALSKKFVE LLELLQKNKE EDLGQVVILF QDMLEVVTRD
1001: IMEEQDQLST LLDSIHGAHS RKHEGITPLD QQDQLFAKAI KFPVEESNAW TEKIKRLHLL LTVKESAMDV PTNLDARRRI SFFANSLFMD MPNAPKVRNM
1101: LPFSILTPYY KEDVLFSLQN LEEPNEDGVS ILFYLQKIYP DEWKNFLERV GCKNEEELRE DEELEEKLRL WASYRGQTLT RTVRGMMYYR KALELQAFLD
1201: MAKDDDLMEG YRATEVMPED SQLMTQCKAI ADMKFTYVVS CQQYGIQKRS NEPCAHDILR LMTEYPSLRV AYIDEVEAPS QDRNKKIEKV YYSVLVKASV
1301: TKPNEPGQSL DQVIYKIKLP GNAILGEGKP ENQNHAIIFT RGECLQTIDM NQEHYMEEAL KMRNLLQEFQ KKHDGVRYPS ILGVREHIFT GSVSSLAWFM
1401: SNQETSFVTI GQRVLANPLR VRFHYGHPDV FDRLFHVTRG GVSKASKIIN LSEDIFAGFN STLREGNVTH HEYMQVGKGR DVGLNQISLF EAKIANGNGE
1501: QTLSRDIYRL GHRFDFFRML SCYYTTIGFY FSTMITVWTV YVFLYGRLYL VLSGLDEALA TGRRFVRNAP LQVALASESF VQLGFLMALP MMMEIGLERG
1601: FRTALSDFIL MQLQLASVFF TFSLGTKTHY YGRTLLHGGA EYRATGRGFV VFHAKFADNY RLYSRSHFVK GIELMILLVV YEIFGQSYRG AITYIFITVS
1701: MWFMVGTWLF APFLFNPSGF EWQKIVDDWT DWHKWISNRG GIGVAPEKSW ESWWEKEQEP LRYSGKRGTI VEILLALRFF IYQYGLVYHL NITKKITKDN
1801: QSVLVYCFSW VVIFVILLVM KTVSVGRRRF SAEFQLVFRL IKGLIFITFT AIVVILIAIP GMTVLDIFVC ILAFMPTGWG LLLIAQAIRP VIQKIGLWGS
1901: IKALARGYEI LMGLLLFTPI AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHKKDRG TRNKE

Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)

0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE

Arabidopsis Description

CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.