Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035841_P002 Maize cytosol, golgi, plasma membrane, plastid 67.72 95.91
TraesCS7A01G146200.1 Wheat cytosol 92.18 92.28
Os06t0182300-01 Rice plasma membrane 90.6 90.37
TraesCS7D01G147700.1 Wheat plastid 92.18 90.05
TraesCS7B01G048700.1 Wheat plastid 92.13 90.05
HORVU7Hr1G029930.1 Barley cytosol, plastid 90.08 89.47
GSMUA_Achr5P16530_001 Banana cytosol 39.16 82.52
GSMUA_Achr7P16080_001 Banana plasma membrane 82.2 80.6
Bra040806.1-P Field mustard cytosol, extracellular, plasma membrane 2.83 79.41
CDY47436 Canola extracellular 2.83 79.41
VIT_04s0044g01280.t01 Wine grape plastid 79.58 78.55
KRH53895 Soybean cytosol 33.33 77.63
GSMUA_Achr10P... Banana cytosol 81.15 77.03
AT2G13680.1 Thale cress cytosol 77.59 76.86
Bra037213.1-P Field mustard cytosol 76.69 76.49
Solyc11g005980.1.1 Tomato cytosol, plastid 77.32 76.28
CDX81451 Canola cytosol, plastid 76.38 75.31
KRH64044 Soybean plastid 76.33 74.53
GSMUA_Achr5P16520_001 Banana plastid 43.94 74.4
KRH43553 Soybean mitochondrion, plastid 74.23 74.26
KRH59571 Soybean cytosol 76.33 74.26
CDX71163 Canola cytosol, extracellular, plasma membrane 2.94 69.14
OQU93328 Sorghum mitochondrion 62.15 60.59
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 61.89 60.4
EER90434 Sorghum plastid 62.15 60.25
OQU93478 Sorghum plasma membrane 9.4 59.87
EES03079 Sorghum plasma membrane, plastid 54.07 53.26
KRH36298 Soybean plasma membrane 4.67 52.35
EES03083 Sorghum cytosol 50.03 51.82
KXG29910 Sorghum cytosol 51.02 48.8
KXG33086 Sorghum cytosol 44.51 47.67
KXG33388 Sorghum mitochondrion 43.67 46.48
KXG40330 Sorghum cytosol 45.93 45.81
KXG40423 Sorghum mitochondrion 31.23 41.93
KRH54242 Soybean cytosol 3.88 25.17
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1UniProt:A0A1W0VRS7ncoils:CoilInterPro:FKS1-like_dom1
GO:GO:0000148GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48InterPro:IPR023175
EnsemblPlants:OQU75971ProteinID:OQU75971ProteinID:OQU75971.1PFAM:PF02364PFAM:PF04652PFAM:PF14288
PANTHER:PTHR12741PANTHER:PTHR12741:SF29MetaCyc:PWY-6773SMART:SM01205EnsemblPlantsGene:SORBI_3010G064200TMHMM:TMhelix
UniParc:UPI0009DC8272InterPro:VPS_Vta1/CALS_NSEG:seg:::
Description
hypothetical protein
Coordinates
chr10:-:5075831..5094445
Molecular Weight (calculated)
219117.0 Da
IEP (calculated)
9.275
GRAVY (calculated)
-0.020
Length
1905 amino acids
Sequence
(BLAST)
0001: MATFSMEVFD NEVVPSTLNS IAPILRVAAE IEHERPRVAY LCRFYAFEKA HRLDQNSIGR GVRQFKTALL QRLEKDNSPS LAKRVKKSDA REIESFYQQY
0101: YENYVRALDK GEQADRAQLG KAYQTAGVLF EVLCAVNKNE KVEELNPEII RLHKDVQEKK DIYTPFNILP LDAASASQSI MQLEEIKAAV AALRNIRGLT
0201: WPSTFEPQRQ KGGDLDLLDW LRAMFGFQRD SVRNQREHLI LFLANVHIRL EPKADPLSKL DDRAVDVVMT KLFNNYRKWC KFLSRKHSLR FPQGAQPQEI
0301: QQRKILYLGL YLLIWGEAAN IRFMPECLCY IFHNMAYELH GLLAGNVSIV TGENIRPSYG GDEEAFLKKV VTPFYRVIRK EAGKSQHGKT PHSAWSNYDD
0401: LNEYFWTSDC FSLGWPMRDD GDFFKSVHDS RPVTMAGSSP QKDSTKSTGK TNFVETRTFW HIFRSFDRMW TFYILALQAM LIIAWNDYSL TEILRKDLLY
0501: SLSSVFVTAA FLQFLQSILD LILNFPGSHR CKFVDIMRSI LKMIVSAVWA VVLPFFYIST ASKVNLLPLK DLNKYLRYVK GVPPLYILAV AVYLIPNILS
0601: AALFLFPMFR RWIENSDWHI VRLLLWWSQK RIYVGRGMHE SQVSLFKYTF FWILLLCSKF SFSYFVQIQP LIKPTKDVMG VHNIKYEWHE FFPNASYNIG
0701: AIMSLWAPVL LVYLMDTQIW YAIFSTIFGG MTGALGRLGE IRTLGMLRSR FHSLPGAFNT YLVPSDKSRN RRFSLSKRFA EVSPNKRTEA AKFAQLWNEV
0801: ICSFREEDLI SDREMDLLVV PYSSDPSLKL MQWPLFLLAS KIPIALDMAA QFRPRDSDLW KRICADEYMK CAVLECYESF KLVLNLVVVG ENEKRIIGII
0901: IKEIEANIGK NTFLANFRMS ALPVLCKKFV ELVSTLKERD ASKFDNVVLL LQDMLEVITR DMMVNEIREL AEFGHGNKDS SVPRRQLFAG SGTKPAIVFP
1001: PPVSAQWEEQ IKRLYLLLTV KESAMDVPTN LEARRRIAFF TNSLFMDMPR APRVRKMLSF SVMTPYYSEE TVYSKSDLDL ENEDGVSIIF YLQKIYPDEW
1101: NNFMERINCK RESEVWGNEE NVLQLRHWAS LRGQTLCRTV RGMMYYRRAL KLQAFLDMAS ECEILEGYKA VADPAEEEKK SQRSLSSQLE AVADMKFTYV
1201: ATCQIYGNQK QSGDRRATDI LNLMVNYPGL RVAYIDEVEE REGDKVQKVF YSVLVKALDN HDQEIYRIKL PGPAKLGEGK PENQNHAIIF TRGEALQTID
1301: MNQDNYLEEA LKMRNLLEEF NENHGVRQPT ILGVREHIFT GGVSSLAWFM SNQETSFVTI GQRVLANPLK VRFHYGHPDV FDRIFHITRG GISKASCGIN
1401: LSEDIFAGFN STLRRGNVTH HEYIQVGKGR DVGLNQISLF EAKVACGNGE QILSRDIYRL GHRFDFFRML SCYFTTVGFY ISSMMVVIIV YVFLYGRLYL
1501: ALSGLEFAIM KQARMRGNRA LQAAMGSQSI VQLGLLMALP MFMEIGLERG FRSALGDFII MQLQLCSVFF TFSLGTKSHY FGRTILHGGA KYRATGRGFV
1601: VRHVRFAENY RMYSRSHFVK ALELMLLLVV YELYGDVATD STAYILLTSS MWFLVITWLF APFLFNPSGF EWQKIVDDWD DWTKWISSRG GIGVPANKAW
1701: ESWWEEEQEH LQSTGLLGRF WEIILSLRFF IFQYGIMYHL NISAGNKSIS VYGLSWLVIV AVVMVLKVVS MGRKKFSADF QLMFRLLKLF LFIGSVGTLA
1801: VLFTVLHLTV GDIFASFLAF APTGWAILQI SQASKPVIKA CGLWGSVKAL SRGYEYLMGI VIFVPVAVLA WFPFVSEFQT RLLFNQAFSR GLQISRILAG
1901: GKKQS
Best Arabidopsis Sequence Match ( AT2G13680.1 )
(BLAST)
0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK
Arabidopsis Description
CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.