CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	extracellular, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040806.1-P	Field mustard	cytosol, extracellular, plasma membrane	75.31	89.71
CDY47436	Canola	extracellular	75.31	89.71
CDY10204	Canola	plasma membrane	55.56	15.73
CDY47126	Canola	plasma membrane	25.93	11.11
OQU93478	Sorghum	plasma membrane	40.74	11.04
CDY37215	Canola	plasma membrane	77.78	8.96
KRH53895	Soybean	cytosol	65.43	6.48
GSMUA_Achr5P16530_001	Banana	cytosol	62.96	5.64
PGSC0003DMT400073787	Potato	plasma membrane	65.43	4.87
CDY44742	Canola	cytosol	32.1	4.32
CDY16627	Canola	cytosol	32.1	4.32
Zm00001d035841_P002	Maize	cytosol, golgi, plasma membrane, plastid	69.14	4.16
CDX81451	Canola	cytosol, plastid	83.95	3.52
AT2G13680.1	Thale cress	cytosol	81.48	3.43
CDY67747	Canola	mitochondrion	25.93	3.26
VIT_04s0044g01280.t01	Wine grape	plastid	72.84	3.06
Solyc11g005980.1.1	Tomato	cytosol, plastid	71.6	3.0
OQU75971	Sorghum	cytosol	69.14	2.94
Os06t0182300-01	Rice	plasma membrane	69.14	2.93
TraesCS7B01G048700.1	Wheat	plastid	70.37	2.92
TraesCS7D01G147700.1	Wheat	plastid	70.37	2.92
CDY05323	Canola	golgi, plasma membrane	43.21	2.91
TraesCS7A01G146200.1	Wheat	cytosol	67.9	2.89
GSMUA_Achr7P16080_001	Banana	plasma membrane	69.14	2.88
KRH64044	Soybean	plastid	69.14	2.87
KRH59571	Soybean	cytosol	69.14	2.86
GSMUA_Achr10P...	Banana	cytosol	70.37	2.84
KRH43553	Soybean	mitochondrion, plastid	64.2	2.73
CDY47273	Canola	plasma membrane	55.56	2.66
CDY06644	Canola	cytosol	61.73	2.6
CDX67777	Canola	cytosol	59.26	2.48
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	56.79	2.36
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	56.79	2.35
CDX69678	Canola	cytosol	56.79	2.35
CDX97217	Canola	cytosol	56.79	2.35
CDY42084	Canola	cytosol, nucleus, plasma membrane	55.56	2.34
CDY12242	Canola	mitochondrion	55.56	2.32
CDY09971	Canola	cytosol	60.49	2.31
CDY10125	Canola	mitochondrion	54.32	2.27
CDX98348	Canola	cytosol, golgi, plasma membrane	59.26	2.08
CDY06215	Canola	cytosol	51.85	2.02
CDX98473	Canola	cytosol	48.15	2.0
CDY37214	Canola	cytosol, mitochondrion, nucleus, plastid	2.47	1.96
CDY24642	Canola	cytosol	44.44	1.89
CDY33198	Canola	cytosol, mitochondrion	43.21	1.85
CDY08011	Canola	cytosol	43.21	1.84
CDX75010	Canola	cytosol, mitochondrion	43.21	1.83
CDX74058	Canola	mitochondrion	43.21	1.79
CDY21974	Canola	plasma membrane	38.27	1.74
CDY48567	Canola	plasma membrane	38.27	1.74
CDY34913	Canola	cytosol	24.69	1.06
CDX86961	Canola	cytosol	2.47	1.01
CDY38027	Canola	cytosol	2.47	1.01
CDY72646	Canola	cytosol	2.47	1.01
CDY01570	Canola	cytosol	2.47	1.01
CDX72782	Canola	cytosol	1.23	0.97
CDY67378	Canola	cytosol	4.94	0.85
CDY42080	Canola	cytosol	4.94	0.85
CDY12248	Canola	cytosol	1.23	0.67
CDY67195	Canola	cytosol	1.23	0.37
CDY42081	Canola	cytosol	1.23	0.37
CDY16628	Canola	cytosol, nucleus, plasma membrane	4.94	0.36
CDY44741	Canola	cytosol, nucleus, plasma membrane	4.94	0.36
GSMUA_Achr5P16520_001	Banana	plastid	4.94	0.36
CDY12867	Canola	cytosol	1.23	0.32
CDY10203	Canola	plasma membrane	6.17	0.32
KXG40423	Sorghum	mitochondrion	4.94	0.28
CDY67918	Canola	cytosol, nucleus, plasma membrane	1.23	0.11
HORVU4Hr1G063770.1	Barley	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDX71163	EnsemblPlantsGene:GSBRNA2T00144668001	GO:A0A078C826	PANTHER:PTHR12741	PANTHER:PTHR12741:SF29	ProteinID:CDX71163
ProteinID:CDX71163.1	TMHMM:TMhelix	UniParc:UPI0004EEDF8A	MapMan:35.1	:	:

Description

BnaC07g04420D

Coordinates

chrLK031792:+:289260..289505

Molecular Weight (calculated)

8941.2 Da

IEP (calculated)

11.011

GRAVY (calculated)

0.431

Length

81 amino acids

Sequence
(BLAST)

1: MGSASDLVSG RTPMKAVGMW GSVKTLVRGY EYIMGVVIFI PATVVAWFPF VSEFQTRLLF NQAFSLALQI QRILAGGKKQ K

Best Arabidopsis Sequence Match ( AT2G13680.1 )
(BLAST)

0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK

Arabidopsis Description

CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.