Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14780.1 | CDX81710 | AT1G15385.1 | 21798944 |
| AT3G14780.1 | CDX96843 | AT1G15385.1 | 21798944 |
| AT3G14780.1 | CDY36554 | AT1G15385.1 | 21798944 |
| AT3G14780.1 | CDY39640 | AT1G15385.1 | 21798944 |
| AT3G14780.1 | CDY55983 | AT1G15385.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005622.1-P | Field mustard | cytosol | 99.63 | 99.63 |
| CDY67195 | Canola | cytosol | 85.93 | 86.57 |
| CDY12248 | Canola | cytosol | 32.96 | 59.73 |
| CDX72782 | Canola | cytosol | 19.63 | 51.46 |
| CDY72646 | Canola | cytosol | 35.56 | 48.48 |
| CDY38027 | Canola | cytosol | 35.56 | 48.48 |
| CDY01570 | Canola | cytosol | 35.56 | 48.48 |
| CDX86961 | Canola | cytosol | 35.56 | 48.48 |
| CDY37214 | Canola | cytosol, mitochondrion, nucleus, plastid | 17.04 | 45.1 |
| CDY12867 | Canola | cytosol | 35.56 | 30.67 |
| CDY67378 | Canola | cytosol | 52.59 | 30.34 |
| CDY42080 | Canola | cytosol | 50.0 | 28.78 |
| KRG94407 | Soybean | extracellular | 3.7 | 11.76 |
| CDY42084 | Canola | cytosol, nucleus, plasma membrane | 51.85 | 7.29 |
| CDY12242 | Canola | mitochondrion | 51.85 | 7.23 |
| CDX85677 | Canola | cytosol, mitochondrion, nucleus, plasma membrane | 46.67 | 6.45 |
| CDX91152 | Canola | cytosol, mitochondrion, nucleus, plasma membrane | 46.67 | 6.45 |
| CDX69678 | Canola | cytosol | 46.67 | 6.44 |
| CDX97217 | Canola | cytosol | 46.67 | 6.44 |
| CDY10125 | Canola | mitochondrion | 46.3 | 6.44 |
| CDY67918 | Canola | cytosol, nucleus, plasma membrane | 20.0 | 5.69 |
| CDX81451 | Canola | cytosol, plastid | 38.89 | 5.43 |
| CDY10203 | Canola | plasma membrane | 30.0 | 5.16 |
| CDX67777 | Canola | cytosol | 31.48 | 4.39 |
| CDY06644 | Canola | cytosol | 30.0 | 4.22 |
| CDY06215 | Canola | cytosol | 30.0 | 3.89 |
| CDY09971 | Canola | cytosol | 30.0 | 3.82 |
| CDX98348 | Canola | cytosol, golgi, plasma membrane | 31.48 | 3.69 |
| CDX98473 | Canola | cytosol | 24.44 | 3.38 |
| CDY33198 | Canola | cytosol, mitochondrion | 21.85 | 3.12 |
| CDX75010 | Canola | cytosol, mitochondrion | 21.85 | 3.09 |
| CDY08011 | Canola | cytosol | 20.37 | 2.89 |
| CDY24642 | Canola | cytosol | 20.0 | 2.83 |
| CDX74058 | Canola | mitochondrion | 20.37 | 2.81 |
| CDY34913 | Canola | cytosol | 17.78 | 2.54 |
| CDY16628 | Canola | cytosol, nucleus, plasma membrane | 7.78 | 1.9 |
| CDY44741 | Canola | cytosol, nucleus, plasma membrane | 7.78 | 1.9 |
| CDY47273 | Canola | plasma membrane | 10.0 | 1.6 |
| CDY47126 | Canola | plasma membrane | 1.11 | 1.59 |
| KRH00819 | Soybean | cytosol, extracellular | 0.37 | 1.23 |
| CDX71163 | Canola | cytosol, extracellular, plasma membrane | 0.37 | 1.23 |
| CDY21974 | Canola | plasma membrane | 7.41 | 1.12 |
| CDY48567 | Canola | plasma membrane | 7.41 | 1.12 |
| Zm00001d045037_P001 | Maize | cytosol | 0.37 | 0.86 |
| CDY67747 | Canola | mitochondrion | 0.74 | 0.31 |
| CDY47436 | Canola | extracellular | 0.0 | 0.0 |
| AT3G14780.1 | Thale cress | nucleus | 0.0 | 0.0 |
| CDY44742 | Canola | cytosol | 0.0 | 0.0 |
| CDY10204 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY16627 | Canola | cytosol | 0.0 | 0.0 |
| CDY05323 | Canola | golgi, plasma membrane | 0.0 | 0.0 |
| CDY37215 | Canola | plasma membrane | 0.0 | 0.0 |
| PGSC0003DMT400065769 | Potato | nucleus, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY42081 | EnsemblPlantsGene:GSBRNA2T00074122001 | Gene3D:1.25.40.270 | GO:A0A078HWI3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003843 | GO:GO:0016740 | InterPro:CALS | InterPro:IPR023175 | InterPro:VPS_Vta1/CALS_N | KEGG:00500+2.4.1.34 |
| MetaCyc:PWY-6773 | ncoils:Coil | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF21 | PFAM:PF04652 | ProteinID:CDY42081 |
| ProteinID:CDY42081.1 | SEG:seg | UniParc:UPI0004EDBE6F | UniProt:A0A078HWI3 | MapMan:35.1 | : |
Description
BnaA05g11050DBnaA05g11050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWI3]
Coordinates
chrLK032514:+:114417..115793
Molecular Weight (calculated)
31313.3 Da
IEP (calculated)
5.319
GRAVY (calculated)
-0.617
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLESEVVP SSLVEVAPIL RLANDVEASN PRVAYLCRFY AFEKACKIDP TSSRRGVRQF KTALVRRLEH DQDETLRADR QKGSDACEMQ SFYQHYNKTY
101: IQPLLDAADK ADRAQLKKAY QTDAIFLEVL KSLKVEVADE VMEAHTKIIE RIQILCALED DGEIFEECPP QEPIVSEESK LKRENVDQKS FLINTIEEGN
201: KQLLEQLKKT NEQRQQFLDI QSKTYALKEI GEENKILLLD LSSIHNPHIR SFMEGEQTRI LQKRNYQYRC
101: IQPLLDAADK ADRAQLKKAY QTDAIFLEVL KSLKVEVADE VMEAHTKIIE RIQILCALED DGEIFEECPP QEPIVSEESK LKRENVDQKS FLINTIEEGN
201: KQLLEQLKKT NEQRQQFLDI QSKTYALKEI GEENKILLLD LSSIHNPHIR SFMEGEQTRI LQKRNYQYRC
0001: MAQRKGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
Arabidopsis Description
CALS2Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.