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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029628.1-P Field mustard cytosol 99.84 99.63
CDY67918 Canola cytosol, nucleus, plasma membrane 49.14 98.84
CDY05323 Canola golgi, plasma membrane 61.92 98.34
AT3G07160.2 Thale cress cytosol 92.46 93.29
CDY08011 Canola cytosol 88.79 89.16
CDX74058 Canola mitochondrion 88.48 86.44
CDY67747 Canola mitochondrion 28.5 84.47
CDY34913 Canola cytosol 82.14 82.92
Solyc01g006350.2.1 Tomato endoplasmic reticulum, nucleus 46.1 78.36
PGSC0003DMT400082009 Potato cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 46.73 77.7
KRH36300 Soybean cytosol 77.53 77.65
KRG93041 Soybean mitochondrion 76.53 76.69
VIT_06s0004g01200.t01 Wine grape cytosol 71.29 74.29
GSMUA_Achr5P11660_001 Banana cytosol, peroxisome, plasma membrane 60.71 71.06
Solyc01g006360.2.1 Tomato nucleus 27.97 69.99
HORVU4Hr1G085510.11 Barley cytosol 67.84 68.01
Os03t0119500-01 Rice plasma membrane 67.78 67.89
TraesCS4D01G346600.1 Wheat golgi 67.63 67.8
TraesCS4B01G351900.1 Wheat cytosol 67.68 67.75
KXG40330 Sorghum cytosol 67.57 67.54
TraesCS5A01G520600.3 Wheat cytosol 67.68 67.33
Zm00001d027392_P003 Maize cytosol 67.26 66.98
CDX75010 Canola cytosol, mitochondrion 61.55 61.55
CDY33198 Canola cytosol, mitochondrion 60.97 61.52
GSMUA_Achr5P11670_001 Banana cytosol 9.32 60.96
CDY16627 Canola cytosol 19.02 60.3
CDY44742 Canola cytosol 19.02 60.3
CDY37215 Canola plasma membrane 21.27 57.75
CDY47436 Canola extracellular 1.89 52.94
CDY10204 Canola plasma membrane 6.97 46.5
CDY47273 Canola plasma membrane 40.34 45.56
CDX71163 Canola cytosol, extracellular, plasma membrane 1.89 44.44
CDY48567 Canola plasma membrane 41.38 44.31
CDY21974 Canola plasma membrane 41.28 44.2
CDX91152 Canola cytosol, mitochondrion, nucleus, plasma membrane 45.05 44.01
CDY42084 Canola cytosol, nucleus, plasma membrane 44.16 43.91
CDX85677 Canola cytosol, mitochondrion, nucleus, plasma membrane 44.89 43.88
CDX81451 Canola cytosol, plastid 44.32 43.79
CDX69678 Canola cytosol 44.79 43.71
CDX97217 Canola cytosol 44.79 43.71
CDY10125 Canola mitochondrion 44.37 43.61
CDY12242 Canola mitochondrion 44.11 43.49
CDY06644 Canola cytosol 43.11 42.84
CDX67777 Canola cytosol 43.22 42.59
CDY10203 Canola plasma membrane 33.63 40.92
CDX98473 Canola cytosol 39.71 38.85
CDY06215 Canola cytosol 42.27 38.72
CDY09971 Canola cytosol 42.69 38.44
CDY67378 Canola cytosol 8.64 35.26
CDX98348 Canola cytosol, golgi, plasma membrane 42.38 35.13
CDY12248 Canola cytosol 2.72 34.9
CDY42080 Canola cytosol 8.38 34.12
CDX72782 Canola cytosol 1.83 33.98
CDY16628 Canola cytosol, nucleus, plasma membrane 19.28 33.3
CDY44741 Canola cytosol, nucleus, plasma membrane 19.22 33.21
CDY37214 Canola cytosol, mitochondrion, nucleus, plastid 1.68 31.37
CDY47126 Canola plasma membrane 2.62 26.45
CDY72646 Canola cytosol 2.62 25.25
CDX86961 Canola cytosol 2.62 25.25
CDY01570 Canola cytosol 2.62 25.25
CDY38027 Canola cytosol 2.62 25.25
CDY67195 Canola cytosol 3.04 21.64
CDY42081 Canola cytosol 2.83 20.0
CDY12867 Canola cytosol 2.88 17.57
Protein Annotations
KEGG:00500+2.4.1.34MapMan:21.7.1GO:A0A078GHK3UniProt:A0A078GHK3EnsemblPlants:CDY24642ProteinID:CDY24642
ProteinID:CDY24642.1ncoils:CoilInterPro:FKS1-like_dom1GO:GO:0000148GO:GO:0003674GO:GO:0003824
GO:GO:0003843GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006075
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00027017001InterPro:Glyco_trans_48PFAM:PF02364PFAM:PF14288PANTHER:PTHR12741
PANTHER:PTHR12741:SF12MetaCyc:PWY-6773SMART:SM01205TMHMM:TMhelixUniParc:UPI0004EEA608SEG:seg
Description
BnaA05g30410DBnaA05g30410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHK3]
Coordinates
chrLK032162:+:91685..104795
Molecular Weight (calculated)
218913.0 Da
IEP (calculated)
8.609
GRAVY (calculated)
-0.054
Length
1909 amino acids
Sequence
(BLAST)
0001: MSRAESSWER LVNAALQRDR AGGASAGGGG PGQGSLMEYV PSSLANNRDI DAILRAADEL QDEDPSIARI LCEHAYSLAQ NLDPNSEGRG VLQFKTGLMS
0101: VVKQKLAKRE VGTIDRSQDI KRLQDFYRLY REKNNVDTLK EDEKQLRESG VFTKEMERKT LRRKRVFATL KVLGNVLEQV AKEIPDELKH VIDSDAAMSE
0201: DTIAYNIIPL DAPVTTNATT SFPEVQAAVA ALKYFPGLPK LPADFPIPAT RNADMLDFLH YIFGFQKDSV SNQREHIVLL LANEQSRLTI PEEREPKLDD
0301: AAVRKVFLKS LDNYIKWCDY LCIQPAWSNL ETISGEKRLL FLSLYFLIWG EAANIRFLPE CLCYIFHHMV REMDEILRQQ VARPAESCMP VESRGSDDGV
0401: SFLDHVIAPL YGVVSAEAFN NDNGRAPHSA WRNYDDFNEY FWSLHSFELG WPWRTSSSFF QKPIPRKKYD LQTGRAKHRG KTSFVEHRTF LHLYHSFHRL
0501: WIFLAMMFQA LAIIAFNKND LYSRKTLREI LSLGPTFVVM KFSESVLDVI MMYGAYSTTR RLAVSRIFLR FIWFSLASVV VSFLYVKALQ EDSNPNSNSV
0601: MFKFYVILIA IYGGVQFFLS ILMRFPTCHN IANKCDRWPV IRFFKWMRQE RHYVGRGMYE KTSDFIKYLL FWVVVLSAKF SFAYFLQIKP LVGPTRMIVK
0701: QDNIQYSWHD LVSRNNYNAL TVASLWAPVV AIYLLDIHIF YTLVSAFLGF LLGARDRLGE IRSLEAIHKQ FEEFPGAFMR ALHVPITNRT SDPSHQAADK
0801: NKVDAAHFAP FWNQIIKCLR EEDYITDFEM DLLLMPKNSG RLQLVQWPLF LLSSKILLAK EIAAESNTQE EIIERIERDD YMKYAVEEVY HTLKLVLMET
0901: LEAEGRMWVE RIYEDIQASI KDRKIHHDFQ LNKLSLVITR VTALLGILKE NETPEHAKGA IKALQDLYDV MRLDILTFNM RGQYETWNIL TQAWNEGRLF
1001: TKLKWPKDPE LKALVKRLYS LFTIKDSAAH VPRNLEARRR LQFFTNSLFM DVPPPKSVDK MLSFSVFTPY YSEVVLYSMA ELTKRNEDGI SILFYLQKIY
1101: PDEWKNFLAR IGQDENALEG DLRNERDILE LRFWASYRGQ TLARTVRGMM YYRKALMLQS YLERKAGRDG ESTPFGNDAT DSEGFELSPE ARAQADLKFT
1201: YVVTCQIYGR QKEDQKPEAA DIALLMQRNE ALRIAYIDVV DTPKEGKSHT EYYSKLVKAD ISGKDKEIYS IRLPGDPKLG EGKPENQNHA IVFTRGNAVQ
1301: TIDMNQDNYF EEALKMRNLL EEFDPNRGHG IRPPTILGVR EHVFTGSVSS LASFMSNQET SFVTLGQRVL AKPLKIRMHY GHPDVFDRVF HITRGGISKA
1401: SRVINISEDI FAGFNSTLRQ GNITHHEYIQ VGKGRDVGLN QIALFEGKVA GGNGEQVLSR DVYRLGQLLD FFRMMSFYFT TVGFYFCTML TVLTVYIFLY
1501: GRLYLALSGV GATIRERAIL LDDTALSAAL NAQFLFQIGV FTAVPMILGF ILEQGFLQAI VSFTTMQFQL CTIFFTFSLG TRTHYFGRTI LHGGARYQAT
1601: GRGFVVKHIK FSENYRLYSR SHFIKAMEVI LLLVVYLSYG NDEAGAVSYI LLTVSSWFLA VSWLFAPYLF NPAGFEWQKV VEDFKEWTNW LFYRGGIGVK
1701: GAESWEAWWE EEISHIRTLS GRIVETILSL RFFIFQYGIV YKLNLQGSDT SIAVYGWSWA AFAMLIVLFK VFTFSQKVSV NFQLVLRFVQ GVSLLVALAG
1801: IVVAIVLTDL SVTDIFASIL AFIPTGWGIL SIACAWKPVI KRLGMWKSVR SLARLFDAGM GMLIFLPVAL CSWFPFVSTF QTRMMFNQAF SRGLEISLIL
1901: AGNNPNSGL
Best Arabidopsis Sequence Match ( AT3G07160.2 )
(BLAST)
0001: MSRAESSWER LVNAALRRDR TGGVAGGNQS SIVGYVPSSL SNNRDIDAIL RAADEIQDED PNIARILCEH GYSLAQNLDP NSEGRGVLQF KTGLMSVIKQ
0101: KLAKREVGTI DRSQDILRLQ EFYRLYREKN NVDTLKEEEK QLRESGAFTD ELERKTVKRK RVFATLKVLG SVLEQLAKEI PEELKHVIDS DAAMSEDTIA
0201: YNIIPLDAPV TTNATTTFPE VQAAVAALKY FPGLPKLPPD FPIPATRTAD MLDFLHYIFG FQKDSVSNQR EHIVLLLANE QSRLNIPEET EPKLDDAAVR
0301: KVFLKSLENY IKWCDYLCIQ PAWSNLEAIN GDKKLLFLSL YFLIWGEAAN IRFLPECLCY IFHHMVREMD EILRQQVARP AESCMPVDSR GSDDGVSFLD
0401: HVIAPLYGVV SAEAFNNDNG RAPHSAWRNY DDFNEYFWSL HSFELGWPWR TSSSFFQKPI PRKKYELKTG RAKHRGKTSF VEHRTFLHLY HSFHRLWIFL
0501: AMMFQALAII AFNKDDLTSR KTLLQILSLG PTFVVMKFSE SVLEVIMMYG AYSTTRRLAV SRIFLRFIWF GLASVFISFL YVKSLKAPNS DSPIVQLYLI
0601: VIAIYGGVQF FFSILMRIPT CHNIANKCDR WPVIRFFKWM RQERHYVGRG MYERTSDFIK YLLFWLVVLS AKFSFAYFLQ IKPLVGPTRM IVKQNNIPYS
0701: WHDFVSRKNY NALTVASLWA PVVAIYLLDI HIFYTIFSAF LGFLLGARDR LGEIRSLEAI HKLFEEFPGA FMRALHVPLT NRTSDTSHQT VDKKNKVDAA
0801: HFAPFWNQII KSLREEDYIT DFEMELLLMP KNSGRLELVQ WPLFLLSSKI LLAKEIAAES NSQEEILERI ERDDYMKYAV EEVYHTLKLV LTETLEAEGR
0901: LWVERIYEDI QTSLKERNIH HDFQLNKLSL VITRVTALLG ILKENETPEH AKGAIKALQD LYDVMRLDIL TFNMRGHYET WNLLTQAWNE GRLFTKLKWP
1001: KDPELKALVK RLYSLFTIKD SAAHVPRNLE ARRRLQFFTN SLFMDVPPPK SVRKMLSFSV FTPYYSEVVL YSMAELTKRN EDGISILFYL QKIYPDEWKN
1101: FLARIGRDEN ALEGDLDNER DILELRFWAS YRGQTLARTV RGMMYYRKAL MLQSYLERKA GNDATDAEGF ELSPEARAQA DLKFTYVVTC QIYGRQKEDQ
1201: KPEAVDIALL MQRNEALRIA YIDVVDSPKE GKSHTEYYSK LVKADISGKD KEIYSIKLPG DPKLGEGKPE NQNHAIVFTR GNAIQTIDMN QDNYFEEALK
1301: MRNLLEEFDR DHGIRPPTIL GVREHVFTGS VSSLASFMSN QETSFVTLGQ RVLAKPLKIR MHYGHPDVFD RVFHITRGGI SKASRVINIS EDIFAGFNTT
1401: LRQGNVTHHE YIQVGKGRDV GLNQIALFEG KVAGGNGEQV LSRDVYRLGQ LLDFFRMMSF FFTTVGFYLC TMLTVLTVYI FLYGRAYLAL SGVGATIRER
1501: AILLDDTALS AALNAQFLFQ IGVFTAVPMV LGFILEQGFL QAIVSFITMQ FQLCTVFFTF SLGTRTHYFG RTILHGGARY QATGRGFVVK HIKFSENYRL
1601: YSRSHFVKAM EVILLLVVYL AYGNDEAGAV SYILLTVSSW FLAVSWLFAP YLFNPAGFEW QKVVEDFKEW TNWLFYRGGI GVKGAESWEA WWEEELSHIR
1701: TLSGRIMETI LSLRFFIFQY GIVYKLKLQG SDTSFAVYGW SWVAFAMIIV LFKVFTFSQK ISVNFQLLLR FIQGLSLLMA LAGIIVAVVL TPLSVTDIFA
1801: CVLAFIPTGW GILSIACAWK PVLKRMGMWK SIRSLARLYD ALMGMLIFLP VALCSWFPFV STFQTRMMFN QAFSRGLEIS LILAGDNPNS GL
Arabidopsis Description
ATGSL10Glucan synthase-like 10 [Source:UniProtKB/TrEMBL;Acc:A0A178V7F9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.