CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72782	Canola	cytosol	44.12	43.69
KRH46035	Soybean	cytosol, plastid	25.49	36.62
CDY12248	Canola	cytosol	47.06	32.21
CDY72646	Canola	cytosol	50.0	25.76
CDX86961	Canola	cytosol	50.0	25.76
CDY38027	Canola	cytosol	50.0	25.76
CDY01570	Canola	cytosol	50.0	25.76
CDY67195	Canola	cytosol	48.04	18.28
CDY12867	Canola	cytosol	53.92	17.57
CDY42081	Canola	cytosol	45.1	17.04
CDY42080	Canola	cytosol	50.98	11.09
CDY67378	Canola	cytosol	50.0	10.9
CDX81451	Canola	cytosol, plastid	98.04	5.18
CDY10203	Canola	plasma membrane	53.92	3.51
CDY42084	Canola	cytosol, nucleus, plasma membrane	59.8	3.18
CDY12242	Canola	mitochondrion	59.8	3.15
CDX85677	Canola	cytosol, mitochondrion, nucleus, plasma membrane	59.8	3.12
CDX91152	Canola	cytosol, mitochondrion, nucleus, plasma membrane	59.8	3.12
CDX69678	Canola	cytosol	58.82	3.07
CDX97217	Canola	cytosol	58.82	3.07
CDY67918	Canola	cytosol, nucleus, plasma membrane	28.43	3.06
CDY10125	Canola	mitochondrion	56.86	2.99
CDX67777	Canola	cytosol	54.9	2.89
CDY06644	Canola	cytosol	53.92	2.86
CDY06215	Canola	cytosol	51.96	2.54
CDY09971	Canola	cytosol	51.96	2.5
CDX71163	Canola	cytosol, extracellular, plasma membrane	1.96	2.47
CDX98348	Canola	cytosol, golgi, plasma membrane	54.9	2.43
GSMUA_Achr4P01160_001	Banana	plastid	19.61	1.98
CDY33198	Canola	cytosol, mitochondrion	35.29	1.9
CDX75010	Canola	cytosol, mitochondrion	35.29	1.89
CDX98473	Canola	cytosol	34.31	1.79
CDY08011	Canola	cytosol	33.33	1.79
CDX74058	Canola	mitochondrion	33.33	1.74
CDY24642	Canola	cytosol	31.37	1.68
KRH46038	Soybean	cytosol	23.53	1.3
CDY34913	Canola	cytosol	22.55	1.22
Zm00001d041460_P001	Maize	mitochondrion, plasma membrane	2.94	0.69
GSMUA_Achr1P27410_001	Banana	cytosol	6.86	0.49
Zm00001d043428_P005	Maize	cytosol, plastid	7.84	0.44
KXG33388	Sorghum	mitochondrion	6.86	0.39
CDY44741	Canola	cytosol, nucleus, plasma membrane	3.92	0.36
CDY16628	Canola	cytosol, nucleus, plasma membrane	3.92	0.36
Os01t0754200-03	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	5.88	0.34
HORVU3Hr1G072540.2	Barley	mitochondrion	5.88	0.33
TraesCS3B01G327500.1	Wheat	mitochondrion	5.88	0.33
CDY48567	Canola	plasma membrane	4.9	0.28
CDY21974	Canola	plasma membrane	4.9	0.28
TraesCS2A01G493100.1	Wheat	mitochondrion	0.98	0.25
KXG33086	Sorghum	cytosol	3.92	0.22
Zm00001d043909_P002	Maize	cytosol	3.92	0.22
TraesCS3D01G292500.1	Wheat	cytosol, nucleus, peroxisome	2.94	0.17
TraesCS2B01G521100.1	Wheat	unclear	1.96	0.11
TraesCS3A01G292700.1	Wheat	cytosol	1.96	0.11
HORVU3Hr1G061700.1	Barley	cytosol, plastid	1.96	0.11
CDY10204	Canola	plasma membrane	0.0	0.0
CDY16627	Canola	cytosol	0.0	0.0
CDY37215	Canola	plasma membrane	0.0	0.0
TraesCS3D01G246000.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY05323	Canola	golgi, plasma membrane	0.0	0.0
TraesCS3B01G274100.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
TraesCS3A01G245500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY44742	Canola	cytosol	0.0	0.0
TraesCS2A01G493000.1	Wheat	plasma membrane	0.0	0.0
CDY47126	Canola	plasma membrane	0.0	0.0
Os01t0672500-01	Rice	plasma membrane	0.0	0.0
CDY47273	Canola	plasma membrane	0.0	0.0
CDY47436	Canola	extracellular	0.0	0.0
CDY67747	Canola	mitochondrion	0.0	0.0
HORVU2Hr1G109970.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY37214	EnsemblPlantsGene:GSBRNA2T00063697001	Gene3D:1.25.40.270	InterPro:IPR023175	InterPro:VPS_Vta1/CALS_N	PANTHER:PTHR12741
PANTHER:PTHR12741:SF29	PFAM:PF04652	ProteinID:CDY37214	ProteinID:CDY37214.1	UniParc:UPI0004EDDE42	UniProt:A0A078HIN1
MapMan:35.1	:	:	:	:	:

Description

BnaA09g08350DBnaA09g08350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIN1]

Coordinates

chrLK032395:+:105963..106366

Molecular Weight (calculated)

11415.7 Da

IEP (calculated)

9.951

GRAVY (calculated)

-0.254

Length

102 amino acids

Sequence
(BLAST)

001: MAQSSTSHDS GPQGLMRRPS RSAATTMSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS SGRGVRQFKT LLFQRLERVI
101: CS

Best Arabidopsis Sequence Match ( AT2G13680.1 )
(BLAST)

0001: MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN
0101: ASSLASRVKK TDGREVESFY QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ EKNEIYAPYN ILPLDSAGAS
0201: QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HRKKTGNLDL LDWLRAMFGF QRDNVRNQRE HLVCLFADNH IRLTPKPEPL NKLDDRAVDT VMSKLFKNYK
0301: NWCKFLGRKH SLRLPQAAQD IQQRKILYMG LYLLIWGEAA NIRFMPECLC YIFHNMAYEL HGLLAGNVSI VTGENIKPSY GGDDEAFLRK VITPIYRVVQ
0401: TEANKNANGK AAHSDWSNYD DLNEYFWTPD CFSLGWPMRD DGDLFKSTRD TTQGKKGSFR KAGRTGKSNF TETRTFWHIY HSFDRLWTFY LLALQAMIIL
0501: AFERVELREI LRKDVLYALS SIFITAAFLR FLQSVLDVIL NFPGFHRWKF TDVLRNILKI VVSLAWCVVL PLCYAQSVSF APGKLKQWLS FLPQVKGVPP
0601: LYIMAVALYL LPNVLAAIMF IFPMLRRWIE NSDWHIFRLL LWWSQPRIYV GRGMHESQIA LIKYTIFWLL LFCCKFAFSY FLQVKLLVKP TNAIMSIRHV
0701: KYKWHEFFPN AEHNYGAVVS LWLPVILVYF MDTQIWYAIF STICGGVIGA FDRLGEIRTL GMLRSRFQSL PGAFNTYLVP SDKTRRRGFS LSKRFAEVTA
0801: ARRTEAAKFS QLWNEIISSF REEDLISDRE MDLLLVPYTS DPSLKLIQWP PFLLASKIPI ALDMAAQFRT RDSDLWKRIC ADEYMKCAVI ECYESFKHVL
0901: HTLVIGENEK RIIGIIIKEV ESNISKNSFL SNFRMAPLPA LCSKFVELVG ILKNADPAKR DTVVLLLQDM LEVVTRDMMQ NENRELVELG HTNKESGRQL
1001: FAGTDAKPAI LFPPVATAQW HEQISRLHLL LTVKESAMDV PTNLEAQRRI AFFTNSLFMD MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS
1101: VVYYLQKIFP DEWTNFLERL DCKDETSVLE SEENILQLRH WVSLRGQTLF RTVRGMMYYR RALKLQAFLD MANETEILAG YKAISEPTEE DKKSQRSLYT
1201: QLEAVADLKF TYVATCQNYG NQKRSGDRRA TDILNLMVNN PSLRVAYIDE VEEREGGKVQ KVFYSVLIKA VDNLDQEIYR IKLPGPAKIG EGKPENQNHA
1301: LIFTRGEALQ AIDMNQDHYL EEALKMRNLL EEFNEDHGVR APTILGFREH IFTGSVSSLA WFMSNQETSF VTIGQRVLAS PLKVRFHYGH PDVFDRIFHI
1401: TRGGISKASR GINLSEDIFA GFNSTLRRGN VTHHEYIQVG KGRDVGLNQI SLFEAKVACG NGEQTLSRDL YRLGHRFDFF RMMSCYFTTV GFYISSMIVV
1501: LTVYAFLYGR LYLSLSGVEE AIVKFAAAKG DSSLKAAMAS QSVVQLGLLM TLPMVMEIGL ERGFRTALSD LIIMQLQLAP VFFTFSLGTK VHYYGRTILH
1601: GGSKYRATGR GFVVKHEKFA ENYRMYSRSH FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD DWDDWNKWIS
1701: SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL
1801: MFRLLKLFLF IGSVVIVGML FHFLKLTVGD IMQSLLAFLP TGWALLQISQ VARPLMKTVG MWGSVKALAR GYEYIMGVVI FMPVTVLAWF PFVSEFQTRL
1901: LFNQAFSRGL QIQRILAGGK KQK

Arabidopsis Description

CALS5Callose synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3B724]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.