Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028611_P001 | Maize | plastid | 21.53 | 35.14 |
| Zm00001d030559_P001 | Maize | mitochondrion | 51.35 | 33.42 |
| Os01t0533100-00 | Rice | mitochondrion, plastid | 24.84 | 25.86 |
| TraesCS3A01G197500.1 | Wheat | mitochondrion | 22.36 | 24.49 |
| KRH21444 | Soybean | mitochondrion | 65.22 | 21.78 |
| KRH22386 | Soybean | cytosol, plasma membrane, plastid | 66.25 | 18.36 |
| KRH10873 | Soybean | plasma membrane | 66.25 | 17.79 |
| KRG93040 | Soybean | plasma membrane | 25.26 | 15.01 |
| KRH63709 | Soybean | cytosol | 9.11 | 14.29 |
| HORVU3Hr1G042600.9 | Barley | cytosol, plastid | 38.1 | 13.29 |
| KRH54242 | Soybean | cytosol | 7.66 | 12.59 |
| KRH43561 | Soybean | mitochondrion | 42.86 | 10.63 |
| KRH46871 | Soybean | mitochondrion | 43.06 | 10.62 |
| KRH01816 | Soybean | cytosol | 43.06 | 10.62 |
| KRH13867 | Soybean | mitochondrion | 42.65 | 10.57 |
| TraesCS6B01G001900.1 | Wheat | cytosol | 36.65 | 10.27 |
| KRH43553 | Soybean | mitochondrion, plastid | 39.96 | 10.14 |
| TraesCS6B01G002100.1 | Wheat | cytosol | 36.44 | 10.08 |
| KRH64044 | Soybean | plastid | 40.58 | 10.05 |
| KRH46038 | Soybean | cytosol | 38.1 | 9.95 |
| KRH59571 | Soybean | cytosol | 40.17 | 9.91 |
| KRH46028 | Soybean | cytosol | 38.1 | 9.86 |
| KRG98933 | Soybean | cytosol, plastid | 38.72 | 9.75 |
| TraesCS3D01G201500.1 | Wheat | cytosol | 38.3 | 9.63 |
| TraesCS3A01G202000.1 | Wheat | cytosol | 38.3 | 9.63 |
| TraesCS3B01G229700.1 | Wheat | cytosol, plastid | 38.3 | 9.63 |
| HORVU2Hr1G118600.49 | Barley | mitochondrion | 37.68 | 9.53 |
| KRH13524 | Soybean | cytosol | 38.51 | 9.47 |
| EES03079 | Sorghum | plasma membrane, plastid | 37.89 | 9.46 |
| KRH21823 | Soybean | cytosol | 38.1 | 9.36 |
| TraesCSU01G021500.1 | Wheat | plastid | 37.89 | 9.36 |
| TraesCS2A01G586600.1 | Wheat | plastid | 37.89 | 9.35 |
| TraesCS2D01G600000.1 | Wheat | plastid | 37.89 | 9.35 |
| KRG98945 | Soybean | cytosol | 37.68 | 9.3 |
| EES03083 | Sorghum | cytosol | 35.2 | 9.24 |
| HORVU3Hr1G058470.35 | Barley | mitochondrion | 35.82 | 9.18 |
| TraesCS5D01G111000.2 | Wheat | mitochondrion | 35.4 | 9.02 |
| TraesCS3B01G230100.1 | Wheat | mitochondrion | 34.99 | 8.91 |
| KRH36300 | Soybean | cytosol | 33.75 | 8.55 |
| KRG93041 | Soybean | mitochondrion | 33.33 | 8.45 |
| KRH54243 | Soybean | endoplasmic reticulum | 26.92 | 8.09 |
| KRH63708 | Soybean | endoplasmic reticulum | 25.47 | 7.73 |
| KRG94407 | Soybean | extracellular | 1.04 | 5.88 |
| KRH46035 | Soybean | cytosol, plastid | 0.62 | 4.23 |
| KRH00819 | Soybean | cytosol, extracellular | 0.62 | 3.7 |
| KRH55582 | Soybean | extracellular, plasma membrane | 0.41 | 2.38 |
| KRH36298 | Soybean | plasma membrane | 0.62 | 1.76 |
| KRH08806 | Soybean | extracellular | 0.21 | 1.64 |
| KRH25579 | Soybean | golgi, mitochondrion, plasma membrane | 0.62 | 0.87 |
| Os01t0533500-01 | Rice | plasma membrane | 0.62 | 0.54 |
| HORVU3Hr1G042540.3 | Barley | cytosol, mitochondrion | 0.41 | 0.35 |
| Os01t0533000-00 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| TraesCS3A01G197600.2 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 0.0 | 0.0 |
| KRH55958 | Soybean | plasma membrane | 0.0 | 0.0 |
| KRH53895 | Soybean | cytosol | 0.0 | 0.0 |
| GSMUA_Achr1P05550_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| KEGG:00500+2.4.1.34 | MapMan:35.1 | UniProt:A0A0R0H4Q3 | EMBL:ACUP02007289 | InterPro:FKS1-like_dom1 | EnsemblPlantsGene:GLYMA_12G1133002 |
| GO:GO:0000148 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003843 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006075 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | EnsemblPlants:KRH25578 | ProteinID:KRH25578 |
| ProteinID:KRH25578.1 | PFAM:PF14288 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF23 | MetaCyc:PWY-6773 | SMART:SM01205 |
| TMHMM:TMhelix | UniParc:UPI0006EDEAB4 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:11127377..11129057
Molecular Weight (calculated)
56243.1 Da
IEP (calculated)
10.167
GRAVY (calculated)
-0.087
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRHRQSPA SVTSSAPGRG EEPFNIIPVH NLLADHPSLR FPEVRAAAAA LRAVGDLRRP PFGQWRPNMD LLDWLALFFG FQRDNVRNQR EHLVLHLANA
101: QMRLTPPPDN IDTLDAGVLR RFRKKLLKNY TSWCSYLGKK SNIWISDRRG GAGDDLRREL LYVSLYLLIW GEAANLRFMP ECICYIFHNM ANELNRILED
201: FIDENTGQPV MPSVSGENAF LNLVVKPIYE TIKREVDSSR NGTAPHSAWR NYDDINEYFW SRRCFEKLKW PLDIGSNFFV TAGGGGKHVG KTGFVEQRSF
301: WNLFRSFDRL WVMLILFLQA AIIVAWEGKT YPWQALEDRT VQVRVLTIFF TWSGLRFLQS LLDVGMQYRL VSRETIGLGM RMVMKCVVAA GWIVVFGVFY
401: ARIWTQRNQD RRWSPAANNR VWNFLVVVFV FIIPELLAVA LFVIPWIRNF IENTNWRIFY MLSWWFQSRS FVGRGLREGL VDN
101: QMRLTPPPDN IDTLDAGVLR RFRKKLLKNY TSWCSYLGKK SNIWISDRRG GAGDDLRREL LYVSLYLLIW GEAANLRFMP ECICYIFHNM ANELNRILED
201: FIDENTGQPV MPSVSGENAF LNLVVKPIYE TIKREVDSSR NGTAPHSAWR NYDDINEYFW SRRCFEKLKW PLDIGSNFFV TAGGGGKHVG KTGFVEQRSF
301: WNLFRSFDRL WVMLILFLQA AIIVAWEGKT YPWQALEDRT VQVRVLTIFF TWSGLRFLQS LLDVGMQYRL VSRETIGLGM RMVMKCVVAA GWIVVFGVFY
401: ARIWTQRNQD RRWSPAANNR VWNFLVVVFV FIIPELLAVA LFVIPWIRNF IENTNWRIFY MLSWWFQSRS FVGRGLREGL VDN
0001: MAQRKGPDPP PPQRRILRTQ TAGNLGEAML DSEVVPSSLV EIAPILRVAN EVEASNPRVA YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENET
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
0101: TLAGRQKSDA REMQSFYQHY YKKYIQALQN AADKADRAQL TKAYQTAAVL FEVLKAVNQT EDVEVADEIL EAHTKVEEKS QIYVPYNILP LDPDSQNQAI
0201: MRFPEIQATV SALRNTRGLP WPAGHKKKLD EDMLDWLQTM FGFQKDNVSN QREHLILLLA NVHIRQFPRP EQQPRLDDRA LTIVMKKLFK NYKKWCKYLG
0301: RKSSLWLPTI QQEVQQRKLL YMGLYLLIWG EAANLRFLPE CLCYIYHHMA FELYGMLAGS VSPMTGEHVK PAYGGEDEAF LQKVVTPIYK TIAKEAKRSR
0401: GGKSKHSEWR NYDDLNEYFW SIRCFRLGWP MRADADFFCQ TAEELRLDRS ENKPKTGDRW MGKVNFVEIR SFWHIFRSFD RMWSFYILSL QAMIIIAWNG
0501: SGKLSGIFQG DVFLKVLSIF ITAAILKLAQ AVLDIALSWK SRHSMSFHVK LRFIFKAVAA AIWVVLMPLT YAYSWKTPSG FAETIKNWFG GHQNSSPSFF
0601: IIVILIYLSP NMLSTLLFAF PFIRRYLERS DYKIVMLMMW WSQPRLYIGR GMHESALSLF KYTMFWVVLL ISKLAFSFYA EIKPLVKPTK DIMRVHISVY
0701: RWHEFFPHAK SNMGVVIALW SPVILVYFMD TQIWYAIVST LVGGLNGAFR RLGEIRTLGM LRSRFQSLPE AFNACLVPNE KSETPKKKGI MATFTRKFDQ
0801: VPSSKDKEAA RFAQMWNKII SSFREEDLIS DREMELLLVP YWADRDLDLI RWPPFLLASK IPIALDMAKD SNGKDRELTK RLSVDSYMTC AVRECYASFK
0901: NLINFLVVGE REGQVINEIF SRIDEHIEKE TLIKDLNLSA LPDLYGQFVR LIEYLMENRE EDKDQIVIVL LNMLEVVTRD IMDEEVPSML ESTHNGTYVK
1001: YDVMTPLHQQ RKYFSQLRFP VYSQTEAWKE KIKRLHLLLT VKESAMDVPS NLEARRRLTF FSNSLFMEMP DAPKIRNMLS FSVLTPYYSE DVLFSIFGLE
1101: KQNEDGVSIL FYLQKIFPDE WTNFLERVKC GSEEELRARE ELEEELRLWA SYRGQTLTKT VRGMMYYRKA LELQAFLDMA KDEELMKGYK ALELTSEDAS
1201: KSGTSLWAQC QALADMKFTF VVSCQQYSVQ KRSGDQRAKD ILRLMTTYPS LRVAYIDEVE QTHKESYKGA DEKIYYSALV KAAPQTKSMD SSESVQTLDQ
1301: VIYRIKLPGP AILGEGKPEN QNHSIIFTRG EGLQTIDMNQ DNYMEEAFKM RNLLQEFLVK HGGVRTPTIL GLREHIFTGS VSSLAWFMSN QENSFVTIGQ
1401: RVLASPLKVR FHYGHPDVFD RLFHLTRGGV CKASKVINLS EDIFAGFNST LREGNVTHHE YIQVGKGRDV GLNQISMFEA KIANGNGEQT LSRDLYRLGH
1501: RFDFFRMLSC YFTTIGFYFS TMLTVLTVYV FLYGRLYLVL SGLEEGLSNQ KAFRSNMPLQ AALASQSFVQ IGFLMALPMM MEIGLERGFH NALIDFVLMQ
1601: LQLASVFFTF QLGTKTHYYG RTLFHGGAEY RGTGRGFVVF HAKFAENYRF YSRSHFVKGI ELMILLLVYQ IFGHAYRGVV TYILITVSIW FMVVTWLFAP
1701: FLFNPSGFEW QKIVDDWTDW NKWIYNRGGI GVPPEKSWES WWEKEIGHLR HSGKRGIILE IVLALRFFIF QYGLVYQLST FKQENQSLWI YGASWFVILF
1801: ILLIVKGLGV GRQRFSTNFQ LLFRIIKGFV FLTFLGLLIT FLALRFLTPK DIFLCMLAFM PTGWGMLLIA QACKPLIQRL GFWSSVRTLA RGYEILMGLL
1901: LFTPVAFLAW FPFVSEFQTR MLFNQAFSRG LQISRILGGQ RKDRSSKNKE
Arabidopsis Description
CALS2Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.