Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G201500.1 | Wheat | cytosol | 99.69 | 99.69 |
| TraesCS3B01G229700.1 | Wheat | cytosol, plastid | 99.11 | 99.11 |
| HORVU3Hr1G042600.9 | Barley | cytosol, plastid | 70.33 | 97.62 |
| HORVU3Hr1G042540.3 | Barley | cytosol, mitochondrion | 28.53 | 96.48 |
| Os01t0533000-00 | Rice | cytosol, plasma membrane | 31.91 | 94.75 |
| TraesCS2A01G586600.1 | Wheat | plastid | 87.71 | 86.1 |
| EES03079 | Sorghum | plasma membrane, plastid | 83.71 | 83.14 |
| Zm00001d044584_P006 | Maize | plastid | 81.99 | 81.69 |
| Os01t0533100-00 | Rice | mitochondrion, plastid | 19.05 | 78.88 |
| CDY10204 | Canola | plasma membrane | 10.88 | 73.08 |
| GSMUA_Achr1P05550_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 46.43 | 69.25 |
| TraesCS3A01G197600.2 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 23.37 | 68.86 |
| VIT_12s0028g00400.t01 | Wine grape | plasma membrane | 59.6 | 66.15 |
| Solyc07g056260.2.1 | Tomato | cytosol, plastid | 63.04 | 63.37 |
| CDY06644 | Canola | cytosol | 63.25 | 63.25 |
| Bra015504.1-P | Field mustard | cytosol | 63.14 | 63.14 |
| AT3G59100.1 | Thale cress | cytosol | 62.73 | 62.73 |
| AT1G06490.1 | Thale cress | cytosol | 63.4 | 62.21 |
| CDX67777 | Canola | cytosol | 61.53 | 61.02 |
| CDY10203 | Canola | plasma membrane | 49.3 | 60.36 |
| Bra032416.1-P | Field mustard | cytosol | 62.68 | 58.39 |
| CDY06215 | Canola | cytosol | 62.78 | 57.87 |
| CDY09971 | Canola | cytosol | 63.14 | 57.22 |
| TraesCS7A01G555700.1 | Wheat | plastid | 55.91 | 54.8 |
| TraesCS6A01G420100.1 | Wheat | plastid | 55.7 | 54.18 |
| TraesCS7A01G146200.1 | Wheat | cytosol | 53.36 | 53.86 |
| TraesCS5A01G490800.2 | Wheat | mitochondrion | 54.35 | 53.65 |
| Bra003364.1-P | Field mustard | cytosol, golgi, plasma membrane | 61.27 | 52.03 |
| CDX98348 | Canola | cytosol, golgi, plasma membrane | 60.02 | 50.07 |
| TraesCS3A01G197500.1 | Wheat | mitochondrion | 10.98 | 47.85 |
| TraesCS6A01G154400.1 | Wheat | cytosol | 48.36 | 47.67 |
| TraesCS2A01G493000.1 | Wheat | plasma membrane | 10.88 | 47.61 |
| TraesCS4A01G459300.1 | Wheat | golgi | 44.09 | 44.25 |
| TraesCS7A01G030500.1 | Wheat | golgi | 43.94 | 44.05 |
| TraesCS5A01G520600.3 | Wheat | cytosol | 43.78 | 43.82 |
| TraesCS3A01G245500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 33.58 | 42.52 |
| TraesCS3A01G292700.1 | Wheat | cytosol | 39.72 | 42.51 |
| KRH25579 | Soybean | golgi, mitochondrion, plasma membrane | 7.55 | 42.27 |
| KRH25578 | Soybean | mitochondrion | 9.63 | 38.3 |
| TraesCS6A01G419900.1 | Wheat | cytosol | 9.73 | 38.09 |
| TraesCS2A01G493100.1 | Wheat | mitochondrion | 7.76 | 37.34 |
| CDY47126 | Canola | plasma membrane | 3.18 | 32.28 |
Protein Annotations
| KEGG:00500+2.4.1.34 | Gene3D:1.25.40.270 | MapMan:21.7.1 | ncoils:Coil | InterPro:FKS1-like_dom1 | GO:GO:0000148 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003843 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005975 | GO:GO:0006075 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_48 | InterPro:IPR023175 | PFAM:PF02364 | PFAM:PF04652 |
| PFAM:PF14288 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF16 | SMART:SM01205 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G202000 |
| EnsemblPlants:TraesCS3A01G202000.1 | InterPro:VPS_Vta1/CALS_N | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:+:340261157..340288230
Molecular Weight (calculated)
222472.0 Da
IEP (calculated)
8.905
GRAVY (calculated)
-0.130
Length
1921 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSMSSGGPSA PQRQPSMGRR NISRAITMRT DGYSGEEEGP IIESELVPSS LAPIVPILRA ANEIEDENPR VAYLCRFTAF EKAHTMDPNS SGRGVRQFKT
0101: YLLHRLEKDE KDTQRRLAST DAKEIQRFYE HYCKKYLEEG LQTRKPDEMA RYYQIASVLY DVLKTVTPDK PNSEYDQYAK GVEKEKASFS HYNILPLNIS
0201: GPTQPVMEIP EIKAAVAILR KINNLPTPRP DTTNGPQGID DGPIVRDLLD WLWQTFGFQK GNVENQKEHL ILLLANIDMR GNGNVHQGER QNHMIQRDTV
0301: DHLMKRVFQN YISWCRYLHL ESNIKIPHDA STQQPELLYI GLYLLIWGEA SNVRFMPECL CYIFHHMARD LYDIISDRRE ESFDPPFRRE GSDDAFLQLV
0401: IQPIYNVIHN EATMSKRGTV SHSKWRNYDD LNEYFWSKKC FKQLGWPMDP ASDFFADPTE TKNDIERHDH SMSRRRMSKT NFVEVRTFLH LFRSFDRMWA
0501: FFILAFQAMV IIAWSPSGSL SAIFEPAVFR NVMTIFITAA FLNFLQATLE IVLNWKAWRS LVCSQMMRHV LKFVVAIGWL IILPVTYSSS IQNPTGLIKF
0601: FSNWIGNFQS QSIYNFAVAL YMLPNIFSAL FFIFLPMRRA LERSNSRIVR FLLWWTQPKL YVARGMYEDT CSLLKYTTFW ILLLICKLAF SYYVEISPLV
0701: GPTRTIMFLG RGKYIWHEFF PYLQHNLGVV FTIWAPIVMV YLMDTQIWYA IFSTICGGVN GAFSRLGEIR TLGMLRSRFE AIPTAFGKHL VPGHGSQPKR
0801: REREKEDKNL HIDKFSDIWN AFIISLRDED LINNRERDLL IVPSSAGDTS VFQWPPFLLA SKIPMALDMA KSVKKRDEEL RKRINQDPYT FYAVIECYET
0901: LLNILYSLMA ETSDKKVVDR IRESLEDSIE RQSLVREFRL DELPQLSAKF DKLLTLLLKT EEEHDTTIKT QIANLLQDTM EIITQDIMKN GQGILKDENR
1001: DNQLFANLNL DSIKDEAWRE KCVRLQLLLT TKESAIYVPT NLEARRRITF FANSLFMKMP RAPQVRSMMS FSVLTPYFKE EVLFSTEDLH KKNEDGISIL
1101: FYLRKIYPDE WKNCLERIKF VPKDEESLKS RMDEISPWAS YRGQTLTRTV RGMMYYRRAL EIQCIQDKID IAKLDRQRTT TSYQEGGNIV DMALAIADIK
1201: FTYVVSCQVY GMQKVSKNLK DKACYLNILN LMIMYPSLRI AYIDEVEAPT KNGTTEKTYY SVLVKGVGEK YDEEIYRIKL PGKPTDIGEG KPENQNHAII
1301: FTRGEALQAI DMNQDNYLEE AFKMRNVLEE FGSDKYGKSK PTILGLREHI FTGSVSSLAW FMSNQETSFV TIGQRVLANP LKVRFHYGHP DIFDRLFHIT
1401: RGGISKASKT INLSEDIFSG FNSTMREGNI THHEYMQVGK GRDVGMNQIS SFEAKVANGN GEQTLSRDIY RLGRRFDFYR MLSFYFTTVG FYFSSMVTVL
1501: TVYVFLYGRL YLVMSGLEKS ILLDPRIKED IKPLENALAS QSVFQLGLLL VLPMVMEVGL EKGFRTALGE FIIMQLQLAS VFFTFQLGTK THYYGRTILH
1601: GGAKYRPTGR GFVVYHAKFA DNYRMYSRSH FVKGLELLIL LVVYLAYGKS YRSTSLYLFV TFSIWFLVAS WLFAPFIFNP SCFEWQKTVD DWTDWRKWMG
1701: NRGGIGMSVD QSWEAWWIGE QEHLRKTSIR ALVLEILLSL RFLIYQYGIV YHLNIARRST SILVYGLSWL VMLTVLVVLK MVSIGRQKFG TDLQLMFRIL
1801: KGLLFLGFIS VMSVLFVVCS LTISDVFASI LGFLPTGWCI LLIGQACAPL IKKTTLWDSI MELGRAYDNI MGLVLFLPIG FLSWFPFVSE FQTRLLFNQA
1901: FSRGLQISRI LAGQKDIGEF E
0101: YLLHRLEKDE KDTQRRLAST DAKEIQRFYE HYCKKYLEEG LQTRKPDEMA RYYQIASVLY DVLKTVTPDK PNSEYDQYAK GVEKEKASFS HYNILPLNIS
0201: GPTQPVMEIP EIKAAVAILR KINNLPTPRP DTTNGPQGID DGPIVRDLLD WLWQTFGFQK GNVENQKEHL ILLLANIDMR GNGNVHQGER QNHMIQRDTV
0301: DHLMKRVFQN YISWCRYLHL ESNIKIPHDA STQQPELLYI GLYLLIWGEA SNVRFMPECL CYIFHHMARD LYDIISDRRE ESFDPPFRRE GSDDAFLQLV
0401: IQPIYNVIHN EATMSKRGTV SHSKWRNYDD LNEYFWSKKC FKQLGWPMDP ASDFFADPTE TKNDIERHDH SMSRRRMSKT NFVEVRTFLH LFRSFDRMWA
0501: FFILAFQAMV IIAWSPSGSL SAIFEPAVFR NVMTIFITAA FLNFLQATLE IVLNWKAWRS LVCSQMMRHV LKFVVAIGWL IILPVTYSSS IQNPTGLIKF
0601: FSNWIGNFQS QSIYNFAVAL YMLPNIFSAL FFIFLPMRRA LERSNSRIVR FLLWWTQPKL YVARGMYEDT CSLLKYTTFW ILLLICKLAF SYYVEISPLV
0701: GPTRTIMFLG RGKYIWHEFF PYLQHNLGVV FTIWAPIVMV YLMDTQIWYA IFSTICGGVN GAFSRLGEIR TLGMLRSRFE AIPTAFGKHL VPGHGSQPKR
0801: REREKEDKNL HIDKFSDIWN AFIISLRDED LINNRERDLL IVPSSAGDTS VFQWPPFLLA SKIPMALDMA KSVKKRDEEL RKRINQDPYT FYAVIECYET
0901: LLNILYSLMA ETSDKKVVDR IRESLEDSIE RQSLVREFRL DELPQLSAKF DKLLTLLLKT EEEHDTTIKT QIANLLQDTM EIITQDIMKN GQGILKDENR
1001: DNQLFANLNL DSIKDEAWRE KCVRLQLLLT TKESAIYVPT NLEARRRITF FANSLFMKMP RAPQVRSMMS FSVLTPYFKE EVLFSTEDLH KKNEDGISIL
1101: FYLRKIYPDE WKNCLERIKF VPKDEESLKS RMDEISPWAS YRGQTLTRTV RGMMYYRRAL EIQCIQDKID IAKLDRQRTT TSYQEGGNIV DMALAIADIK
1201: FTYVVSCQVY GMQKVSKNLK DKACYLNILN LMIMYPSLRI AYIDEVEAPT KNGTTEKTYY SVLVKGVGEK YDEEIYRIKL PGKPTDIGEG KPENQNHAII
1301: FTRGEALQAI DMNQDNYLEE AFKMRNVLEE FGSDKYGKSK PTILGLREHI FTGSVSSLAW FMSNQETSFV TIGQRVLANP LKVRFHYGHP DIFDRLFHIT
1401: RGGISKASKT INLSEDIFSG FNSTMREGNI THHEYMQVGK GRDVGMNQIS SFEAKVANGN GEQTLSRDIY RLGRRFDFYR MLSFYFTTVG FYFSSMVTVL
1501: TVYVFLYGRL YLVMSGLEKS ILLDPRIKED IKPLENALAS QSVFQLGLLL VLPMVMEVGL EKGFRTALGE FIIMQLQLAS VFFTFQLGTK THYYGRTILH
1601: GGAKYRPTGR GFVVYHAKFA DNYRMYSRSH FVKGLELLIL LVVYLAYGKS YRSTSLYLFV TFSIWFLVAS WLFAPFIFNP SCFEWQKTVD DWTDWRKWMG
1701: NRGGIGMSVD QSWEAWWIGE QEHLRKTSIR ALVLEILLSL RFLIYQYGIV YHLNIARRST SILVYGLSWL VMLTVLVVLK MVSIGRQKFG TDLQLMFRIL
1801: KGLLFLGFIS VMSVLFVVCS LTISDVFASI LGFLPTGWCI LLIGQACAPL IKKTTLWDSI MELGRAYDNI MGLVLFLPIG FLSWFPFVSE FQTRLLFNQA
1901: FSRGLQISRI LAGQKDIGEF E
0001: MEASSSGTAE LPRSLSRRAP SRATTMMIDR PNEDASAMDS ELVPSSLASI APILRVANEI EKDNPRVAYL CRFHAFEKAH RMDATSSGRG VRQFKTYLLH
0101: RLEKEEEETK PQLAKNDPRE IQAYYQNFYE KYIKEGETSR KPEEMARLYQ IASVLYDVLK TVVPSPKVDY ETRRYAEEVE RKRDRYEHYN ILPLYAVGTK
0201: PAIVELPEVK AAFSAVRNVR NLPRRRIHLP SNTPNEMRKA RTKLNDILEW LASEFGFQRG NVANQREHII LLLANADIRK RNDEEYDELK PSTVTELMDK
0301: TFKSYYSWCK YLHSTSNLKF PDDCDKQQLQ LIYISLYLLI WGEASNVRFM PECICYIFHN MANDVYGILF SNVEAVSGET YETEEVIDEE SFLRTVITPI
0401: YQVIRNEAKR NKGGTASHSQ WRNYDDLNEY FWSKKCFKIG WPLDLKADFF LNSDEITPQD ERLNQVTYGK SKPKTNFVEV RTFWNLFRDF DRMWIFLVMA
0501: FQAMVIVGWH GSGSLGDIFD KDVFKTVLTI FITSAYLTLL QAALDIILNF NAWKNFKFSQ ILRYLLKFAV AFMWAVLLPI AYSKSVQRPT GVVKFFSTWT
0601: GDWKDQSFYT YAVSFYVLPN ILAALLFLVP PFRRAMECSD MRPIKVIMWW AQPKLYVGRG MHEDMFSLFK YTTFWIMLLI SKLAFNYYVE ILPLITPTKM
0701: IMNLHIGHYQ WHEFFPHATN NIGVVIAIWA PIVLVYLMDT QIWYAIFSTL FGGIHGAFSH LGEIRTLGML RSRFESIPIA FSRTLMPSED AKRKHADDYV
0801: DQKNITNFSQ VWNEFIYSMR SEDKISDRDR DLLLVPSSSG DVSVIQWPPF LLASKIPIAV DMAKDFKGKE DAELFRKIKS DSYMYYAVIE SYETLKKIIY
0901: ALLEDEADRR VMNQVFLEVD MSMQQQRFIY EFRMSGLPLL SDKLEKFLSI LLSDYEDQGT YKSQLINVFQ DVIEIITQDL LVNGHEILER ARVHSPDIKN
1001: EKKEQRFEKI NIHLVRDRCW REKVIRLHLL LSVKESAINV PQNLEARRRI TFFANSLFMN MPSAPRIRDM LSFSVLTPYY KEDVLYSEED LNKENEDGIS
1101: ILFYLQKIYP DEWTNYLDRL KDPKLPEKDK SEFLREWVSY RGQTLARTVR GMMYYRQALE LQCYQEVAGE QAEFSVFRAM ASNDENQKAF LERARALADL
1201: KFTYVVSCQV YGNQKKSGDI HNRSCYTNIL QLMLKYPSLR VAYVDEREET ADAKSPKVFY SVLLKGGDKF DEEIYRIKLP GPPAEIGEGK PENQNHAIIF
1301: TRGEALQTID MNQDNYFEEA FKLRNVLEEF NKERVGRRKP TILGLREHIF TGSVSSLAWF MSNQESSFVT IGQRILANPL RVRFHYGHPD IFDRIFHITR
1401: GGVSKASKVI NLSEDIFGGF NSTLRGGYVT HHEYIQVGKG RDVGLNPISI FEAKVANGNG EQTLSRDVYR LGHRFDFYRM LSFYFTTIGF YFSSMLTVLT
1501: VYAFLYGRMY MVMSGLEKEI LRLASPNQLE ALEQALATQS IFQLGFLMVL PMVMEIGLEH GFRSAIVDFF IMQLQLASVF FTFQLGTKSH YYGRTILHGG
1601: SKYRPTGRGF VVFHAKFAEN YRLYSRSHFV KGLELLLLLV VYQIYGHSYR SSNLYLYITV SMWFMVGSWL FAPFIFNPSG FEWQKTVDDW TDWKRWLGDR
1701: GGIGIPVEKS WESWWNVEQE HLKHTSIRGR ILEITLALRF FIYQYGIVYQ LNISQRSKSF LVYGLSWVVL LTSLLVLKMV SMGRRRFGTD FQLMFRILKA
1801: LLFLGFLSVM TILFVVFKLT LTDLSASVLA FLPTGWAILL IGQVLRSPIK ALGVWDSVKE LGRAYENIMG LVIFAPIAVL SWFPIVSEFQ ARLLFNQAFS
1901: RGLQISMILA GRKDKATSSH K
0101: RLEKEEEETK PQLAKNDPRE IQAYYQNFYE KYIKEGETSR KPEEMARLYQ IASVLYDVLK TVVPSPKVDY ETRRYAEEVE RKRDRYEHYN ILPLYAVGTK
0201: PAIVELPEVK AAFSAVRNVR NLPRRRIHLP SNTPNEMRKA RTKLNDILEW LASEFGFQRG NVANQREHII LLLANADIRK RNDEEYDELK PSTVTELMDK
0301: TFKSYYSWCK YLHSTSNLKF PDDCDKQQLQ LIYISLYLLI WGEASNVRFM PECICYIFHN MANDVYGILF SNVEAVSGET YETEEVIDEE SFLRTVITPI
0401: YQVIRNEAKR NKGGTASHSQ WRNYDDLNEY FWSKKCFKIG WPLDLKADFF LNSDEITPQD ERLNQVTYGK SKPKTNFVEV RTFWNLFRDF DRMWIFLVMA
0501: FQAMVIVGWH GSGSLGDIFD KDVFKTVLTI FITSAYLTLL QAALDIILNF NAWKNFKFSQ ILRYLLKFAV AFMWAVLLPI AYSKSVQRPT GVVKFFSTWT
0601: GDWKDQSFYT YAVSFYVLPN ILAALLFLVP PFRRAMECSD MRPIKVIMWW AQPKLYVGRG MHEDMFSLFK YTTFWIMLLI SKLAFNYYVE ILPLITPTKM
0701: IMNLHIGHYQ WHEFFPHATN NIGVVIAIWA PIVLVYLMDT QIWYAIFSTL FGGIHGAFSH LGEIRTLGML RSRFESIPIA FSRTLMPSED AKRKHADDYV
0801: DQKNITNFSQ VWNEFIYSMR SEDKISDRDR DLLLVPSSSG DVSVIQWPPF LLASKIPIAV DMAKDFKGKE DAELFRKIKS DSYMYYAVIE SYETLKKIIY
0901: ALLEDEADRR VMNQVFLEVD MSMQQQRFIY EFRMSGLPLL SDKLEKFLSI LLSDYEDQGT YKSQLINVFQ DVIEIITQDL LVNGHEILER ARVHSPDIKN
1001: EKKEQRFEKI NIHLVRDRCW REKVIRLHLL LSVKESAINV PQNLEARRRI TFFANSLFMN MPSAPRIRDM LSFSVLTPYY KEDVLYSEED LNKENEDGIS
1101: ILFYLQKIYP DEWTNYLDRL KDPKLPEKDK SEFLREWVSY RGQTLARTVR GMMYYRQALE LQCYQEVAGE QAEFSVFRAM ASNDENQKAF LERARALADL
1201: KFTYVVSCQV YGNQKKSGDI HNRSCYTNIL QLMLKYPSLR VAYVDEREET ADAKSPKVFY SVLLKGGDKF DEEIYRIKLP GPPAEIGEGK PENQNHAIIF
1301: TRGEALQTID MNQDNYFEEA FKLRNVLEEF NKERVGRRKP TILGLREHIF TGSVSSLAWF MSNQESSFVT IGQRILANPL RVRFHYGHPD IFDRIFHITR
1401: GGVSKASKVI NLSEDIFGGF NSTLRGGYVT HHEYIQVGKG RDVGLNPISI FEAKVANGNG EQTLSRDVYR LGHRFDFYRM LSFYFTTIGF YFSSMLTVLT
1501: VYAFLYGRMY MVMSGLEKEI LRLASPNQLE ALEQALATQS IFQLGFLMVL PMVMEIGLEH GFRSAIVDFF IMQLQLASVF FTFQLGTKSH YYGRTILHGG
1601: SKYRPTGRGF VVFHAKFAEN YRLYSRSHFV KGLELLLLLV VYQIYGHSYR SSNLYLYITV SMWFMVGSWL FAPFIFNPSG FEWQKTVDDW TDWKRWLGDR
1701: GGIGIPVEKS WESWWNVEQE HLKHTSIRGR ILEITLALRF FIYQYGIVYQ LNISQRSKSF LVYGLSWVVL LTSLLVLKMV SMGRRRFGTD FQLMFRILKA
1801: LLFLGFLSVM TILFVVFKLT LTDLSASVLA FLPTGWAILL IGQVLRSPIK ALGVWDSVKE LGRAYENIMG LVIFAPIAVL SWFPIVSEFQ ARLLFNQAFS
1901: RGLQISMILA GRKDKATSSH K
Arabidopsis Description
CALS6Putative callose synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.