Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63709 | Soybean | cytosol | 72.66 | 68.18 |
| Os06t0113150-00 | Rice | mitochondrion | 56.06 | 33.13 |
| Solyc03g111560.2.1 | Tomato | nucleus | 74.74 | 26.37 |
| VIT_19s0138g00110.t01 | Wine grape | nucleus | 11.07 | 22.54 |
| GSMUA_Achr2P04770_001 | Banana | mitochondrion, plasma membrane | 62.28 | 21.9 |
| Zm00001d035842_P001 | Maize | cytosol | 23.53 | 11.99 |
| CDY33198 | Canola | cytosol, mitochondrion | 76.12 | 11.63 |
| AT2G36850.1 | Thale cress | mitochondrion | 76.12 | 11.55 |
| Bra005239.1-P | Field mustard | cytosol, mitochondrion | 76.12 | 11.52 |
| CDX75010 | Canola | cytosol, mitochondrion | 75.78 | 11.47 |
| Zm00001d030266_P001 | Maize | cytosol | 58.13 | 8.76 |
| TraesCS7D01G026700.1 | Wheat | mitochondrion | 57.44 | 8.66 |
| TraesCS7A01G030500.1 | Wheat | golgi | 57.44 | 8.66 |
| TraesCS4A01G459300.1 | Wheat | golgi | 57.09 | 8.62 |
| HORVU7Hr1G003460.9 | Barley | plastid | 54.33 | 8.23 |
| VIT_06s0004g01200.t01 | Wine grape | cytosol | 49.48 | 7.81 |
| VIT_13s0156g00210.t01 | Wine grape | mitochondrion | 26.99 | 4.01 |
| VIT_06s0004g01270.t01 | Wine grape | cytosol, mitochondrion, nucleus, plasma membrane | 26.64 | 3.92 |
| VIT_04s0044g01280.t01 | Wine grape | plastid | 25.61 | 3.83 |
| VIT_15s0024g01490.t01 | Wine grape | cytosol, peroxisome, plastid | 4.5 | 3.37 |
| VIT_12s0028g03720.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plasma membrane | 9.34 | 1.94 |
| VIT_12s0028g00400.t01 | Wine grape | plasma membrane | 9.69 | 1.62 |
| VIT_19s0138g00120.t01 | Wine grape | mitochondrion, plasma membrane | 6.57 | 1.08 |
| VIT_00s0265g00050.t01 | Wine grape | cytosol | 4.15 | 0.73 |
| VIT_17s0000g10010.t01 | Wine grape | cytosol | 2.42 | 0.43 |
| KRH54243 | Soybean | endoplasmic reticulum | 2.08 | 0.37 |
| KRH63708 | Soybean | endoplasmic reticulum | 1.38 | 0.25 |
| PGSC0003DMT400039392 | Potato | plasma membrane | 0.69 | 0.17 |
| Solyc03g111570.2.1 | Tomato | nucleus, plastid | 0.0 | 0.0 |
| GSMUA_Achr2P04760_001 | Banana | plasma membrane | 0.0 | 0.0 |
| Os06t0112800-01 | Rice | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_17s0000g10020 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g10020.t01 | EnsemblPlantsGene:VIT_17s0000g10020 | PANTHER:PTHR12741 | PANTHER:PTHR12741:SF43 |
| ProteinID:CCB42904 | ProteinID:CCB42904.1 | UniParc:UPI000210A5DC | UniProt:F6GTM0 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr17:-:12124184..12149054
Molecular Weight (calculated)
32721.0 Da
IEP (calculated)
6.548
GRAVY (calculated)
-0.554
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVSDNWER LVRATLRREQ LRNAGQGHER TSSGIAGAVP PSLGRETNID AILQAADEVE AEDQNVARIL CEQAYTMAQN LDPNSDGRGV LQFKTGLQSI
101: IKQKLAKRDG TQIDRSRDVE RLWNFYLSYK RRHRVDDIQR EEQKWRETGT FSANLGEMEL RSLKMKKVFA TLRALVEVME ALNKDADSGV GLHIREELRR
201: IKRSDGTLSG ELMPYNIVPL EAPSLTNAIG VFPEVKGAIS AIRYTEHFPQ LPANFEISGQ RDVDMFDLLE YVFGFQNAKI LEDKKEIGG
101: IKQKLAKRDG TQIDRSRDVE RLWNFYLSYK RRHRVDDIQR EEQKWRETGT FSANLGEMEL RSLKMKKVFA TLRALVEVME ALNKDADSGV GLHIREELRR
201: IKRSDGTLSG ELMPYNIVPL EAPSLTNAIG VFPEVKGAIS AIRYTEHFPQ LPANFEISGQ RDVDMFDLLE YVFGFQNAKI LEDKKEIGG
0001: MARVYSNWDR LVRATLRREQ LRNTGQGHER VSSGLAGAVP PSLGRATNID AILQAADEIQ SEDPSVARIL CEQAYSMAQN LDPNSDGRGV LQFKTGLMSV
0101: IKQKLAKRDG ASIDRDRDIE RLWEFYKLYK RRHRVDDIQK EEQKWRESGT TFSSNVGEIL KMRKVFATLR ALIEVLEVLS RDADPNGVGR SIRDELGRIK
0201: KADATLSAEL TPYNIVPLEA QSMTNAIGVF PEVRGAVQAI RYTEHFPRLP VDFEISGQRD ADMFDLLEYI FGFQRDNVRN QREHLVLTLS NAQSQLSIPG
0301: QNDPKIDENA VNEVFLKVLD NYIKWCKYLR IRVVYNKLEA IDRDRKLFLV SLYFLIWGEA ANVRFLPECI CYIFHNMAKE LDAKLDHGEA VRADSCLTGT
0401: DTGSVSFLER IICPIYETIS AETVRNNGGK AAHSEWRNYD DFNEYFWTPA CFELSWPMKT ESRFLSKPKG RKRTAKSSFV EHRTYLHLFR SFIRLWIFMF
0501: IMFQSLTIIA FRNEHLNIET FKILLSAGPT YAIMNFIECL LDVVLMYGAY SMARGMAISR LVIRFLWWGL GSAFVVYYYV KVLDERNKPN QNEFFFHLYI
0601: LVLGCYAAVR LIFGLLVKLP ACHALSEMSD QSFFQFFKWI YQERYFVGRG LFENLSDYCR YVAFWLVVLA SKFTFAYFLQ IKPLVKPTNT IIHLPPFQYS
0701: WHDIVSKSND HALTIVSLWA PVLAIYLMDI HIWYTLLSAI IGGVMGAKAR LGEIRTIEMV HKRFESFPEA FAQNLVSPVV KRVPLGQHAS QDGQDMNKAY
0801: AAMFSPFWNE IIKSLREEDY LSNREMDLLS IPSNTGSLRL VQWPLFLLCS KILVAIDLAM ECKETQEVLW RQICDDEYMA YAVQECYYSV EKILNSMVND
0901: EGRRWVERIF LEISNSIEQG SLAITLNLKK LQLVVSRFTA LTGLLIRNET PDLAKGAAKA MFDFYEVVTH DLLSHDLREQ LDTWNILARA RNEGRLFSRI
1001: AWPRDPEIIE QVKRLHLLLT VKDAAANVPK NLEARRRLEF FTNSLFMDMP QARPVAEMVP FSVFTPYYSE TVLYSSSELR SENEDGISIL FYLQKIFPDE
1101: WENFLERIGR SESTGDADLQ ASSTDALELR FWVSYRGQTL ARTVRGMMYY RRALMLQSFL ERRGLGVDDA SLTNMPRGFE SSIEARAQAD LKFTYVVSCQ
1201: IYGQQKQQKK PEATDIGLLL QRYEALRVAF IHSEDVGNGD GGSGGKKEFY SKLVKADIHG KDEEIYSIKL PGDPKLGEGK PENQNHAIVF TRGEAIQTID
1301: MNQDNYLEEA IKMRNLLEEF HGKHGIRRPT ILGVREHVFT GSVSSLAWFM SNQETSFVTL GQRVLAYPLK VRMHYGHPDV FDRIFHITRG GISKASRVIN
1401: ISEDIYAGFN STLRQGNITH HEYIQVGKGR DVGLNQIALF EGKVAGGNGE QVLSRDVYRI GQLFDFFRMM SFYFTTVGFY VCTMMTVLTV YVFLYGRVYL
1501: AFSGADRAIS RVAKLSGNTA LDAALNAQFL VQIGIFTAVP MVMGFILELG LLKAIFSFIT MQFQLCSVFF TFSLGTRTHY FGRTILHGGA KYRATGRGFV
1601: VQHIKFADNY RLYSRSHFVK AFEVALLLII YIAYGYTDGG ASSFVLLTIS SWFLVISWLF APYIFNPSGF EWQKTVEDFE DWVSWLMYKG GVGVKGELSW
1701: ESWWEEEQAH IQTLRGRILE TILSLRFFMF QYGIVYKLDL TRKNTSLALY GYSWVVLVVI VFLFKLFWYS PRKSSNILLA LRFLQGVASI TFIALIVVAI
1801: AMTDLSIPDM FACVLGFIPT GWALLSLAIT WKQVLRVLGL WETVREFGRI YDAAMGMLIF SPIALLSWFP FISTFQSRLL FNQAFSRGLE ISIILAGNRA
1901: NVET
0101: IKQKLAKRDG ASIDRDRDIE RLWEFYKLYK RRHRVDDIQK EEQKWRESGT TFSSNVGEIL KMRKVFATLR ALIEVLEVLS RDADPNGVGR SIRDELGRIK
0201: KADATLSAEL TPYNIVPLEA QSMTNAIGVF PEVRGAVQAI RYTEHFPRLP VDFEISGQRD ADMFDLLEYI FGFQRDNVRN QREHLVLTLS NAQSQLSIPG
0301: QNDPKIDENA VNEVFLKVLD NYIKWCKYLR IRVVYNKLEA IDRDRKLFLV SLYFLIWGEA ANVRFLPECI CYIFHNMAKE LDAKLDHGEA VRADSCLTGT
0401: DTGSVSFLER IICPIYETIS AETVRNNGGK AAHSEWRNYD DFNEYFWTPA CFELSWPMKT ESRFLSKPKG RKRTAKSSFV EHRTYLHLFR SFIRLWIFMF
0501: IMFQSLTIIA FRNEHLNIET FKILLSAGPT YAIMNFIECL LDVVLMYGAY SMARGMAISR LVIRFLWWGL GSAFVVYYYV KVLDERNKPN QNEFFFHLYI
0601: LVLGCYAAVR LIFGLLVKLP ACHALSEMSD QSFFQFFKWI YQERYFVGRG LFENLSDYCR YVAFWLVVLA SKFTFAYFLQ IKPLVKPTNT IIHLPPFQYS
0701: WHDIVSKSND HALTIVSLWA PVLAIYLMDI HIWYTLLSAI IGGVMGAKAR LGEIRTIEMV HKRFESFPEA FAQNLVSPVV KRVPLGQHAS QDGQDMNKAY
0801: AAMFSPFWNE IIKSLREEDY LSNREMDLLS IPSNTGSLRL VQWPLFLLCS KILVAIDLAM ECKETQEVLW RQICDDEYMA YAVQECYYSV EKILNSMVND
0901: EGRRWVERIF LEISNSIEQG SLAITLNLKK LQLVVSRFTA LTGLLIRNET PDLAKGAAKA MFDFYEVVTH DLLSHDLREQ LDTWNILARA RNEGRLFSRI
1001: AWPRDPEIIE QVKRLHLLLT VKDAAANVPK NLEARRRLEF FTNSLFMDMP QARPVAEMVP FSVFTPYYSE TVLYSSSELR SENEDGISIL FYLQKIFPDE
1101: WENFLERIGR SESTGDADLQ ASSTDALELR FWVSYRGQTL ARTVRGMMYY RRALMLQSFL ERRGLGVDDA SLTNMPRGFE SSIEARAQAD LKFTYVVSCQ
1201: IYGQQKQQKK PEATDIGLLL QRYEALRVAF IHSEDVGNGD GGSGGKKEFY SKLVKADIHG KDEEIYSIKL PGDPKLGEGK PENQNHAIVF TRGEAIQTID
1301: MNQDNYLEEA IKMRNLLEEF HGKHGIRRPT ILGVREHVFT GSVSSLAWFM SNQETSFVTL GQRVLAYPLK VRMHYGHPDV FDRIFHITRG GISKASRVIN
1401: ISEDIYAGFN STLRQGNITH HEYIQVGKGR DVGLNQIALF EGKVAGGNGE QVLSRDVYRI GQLFDFFRMM SFYFTTVGFY VCTMMTVLTV YVFLYGRVYL
1501: AFSGADRAIS RVAKLSGNTA LDAALNAQFL VQIGIFTAVP MVMGFILELG LLKAIFSFIT MQFQLCSVFF TFSLGTRTHY FGRTILHGGA KYRATGRGFV
1601: VQHIKFADNY RLYSRSHFVK AFEVALLLII YIAYGYTDGG ASSFVLLTIS SWFLVISWLF APYIFNPSGF EWQKTVEDFE DWVSWLMYKG GVGVKGELSW
1701: ESWWEEEQAH IQTLRGRILE TILSLRFFMF QYGIVYKLDL TRKNTSLALY GYSWVVLVVI VFLFKLFWYS PRKSSNILLA LRFLQGVASI TFIALIVVAI
1801: AMTDLSIPDM FACVLGFIPT GWALLSLAIT WKQVLRVLGL WETVREFGRI YDAAMGMLIF SPIALLSWFP FISTFQSRLL FNQAFSRGLE ISIILAGNRA
1901: NVET
Arabidopsis Description
CALS10Callose synthase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.