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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G405600.1 Wheat plastid 97.81 97.51
TraesCS6B01G468200.1 Wheat golgi, unclear 97.86 97.46
TraesCS6A01G420100.1 Wheat plastid 97.5 96.91
Zm00001d018565_P002 Maize cytosol 31.13 94.0
Os02t0832500-01 Rice plasma membrane 14.62 92.28
OQU86033 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 89.0 89.5
Os02t0832400-02 Rice nucleus, peroxisome, plasma membrane, plastid 42.23 88.1
Zm00001d018562_P003 Maize golgi 25.37 84.41
HORVU7Hr1G120960.14 Barley cytosol 80.69 83.99
Zm00001d018560_P002 Maize plastid 25.11 81.49
HORVU4Hr1G082910.11 Barley mitochondrion 71.47 71.99
HORVU6Hr1G095120.2 Barley cytosol, plastid 15.79 66.38
HORVU3Hr1G042540.3 Barley cytosol, mitochondrion 18.95 65.49
HORVU7Hr1G029930.1 Barley cytosol, plastid 58.84 60.22
HORVU6Hr1G031200.8 Barley endoplasmic reticulum 33.57 54.28
HORVU2Hr1G118600.49 Barley mitochondrion 51.71 53.17
HORVU3Hr1G058470.35 Barley mitochondrion 50.64 52.73
HORVU3Hr1G042600.9 Barley cytosol, plastid 35.76 50.72
HORVU6Hr1G031230.34 Barley plastid 16.56 45.2
HORVU3Hr1G072540.2 Barley mitochondrion 41.01 44.92
HORVU4Hr1G085510.11 Barley cytosol 43.35 44.7
HORVU7Hr1G003460.9 Barley plastid 43.4 44.65
HORVU3Hr1G061700.1 Barley cytosol, plastid 42.13 44.2
HORVU2Hr1G109970.1 Barley cytosol 34.84 41.03
HORVU4Hr1G063770.1 Barley plasma membrane 7.95 37.59
HORVU5Hr1G062460.1 Barley plastid 11.41 35.73
HORVU2Hr1G046930.1 Barley plasma membrane 7.39 27.94
HORVU5Hr1G029220.1 Barley cytosol 0.82 26.23
Protein Annotations
KEGG:00500+2.4.1.34Gene3D:1.25.40.270MapMan:21.7.1UniProt:A0A287V9Z5ncoils:CoilInterPro:FKS1-like_dom1
GO:GO:0000148GO:GO:0003674GO:GO:0003824GO:GO:0003843GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0005975GO:GO:0006075GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_48EnsemblPlantsGene:HORVU6Hr1G095090
EnsemblPlants:HORVU6Hr1G095090.22InterPro:IPR023175PFAM:PF02364PFAM:PF04652PFAM:PF14288PANTHER:PTHR12741
PANTHER:PTHR12741:SF17SMART:SM01205TMHMM:TMhelixUniParc:UPI000B463D3AInterPro:VPS_Vta1/CALS_NSEG:seg
Description
No Description!
Coordinates
chrchr6H:+:582786429..582799968
Molecular Weight (calculated)
226053.0 Da
IEP (calculated)
9.391
GRAVY (calculated)
-0.129
Length
1963 amino acids
Sequence
(BLAST)
0001: ASSSGRRPTG AGPGGGEPSS TPGPASGGGR RILRTQTAGN LGESIFDSEV VPSSLVEIAP ILRVANEVEG SNPRVAYLCR FYAFEKAHRL DPTSSGRGVR
0101: QFKTALLQRL ERENDPTLKG RVKQSDAREM QSFYQHYYKK YIQALQNAAD KADRAQLTKA YQTAAVLFEV LKAVNVSQKI EVDQILETHN QVEEKKKLYL
0201: PYNILPLDPD SAANQAIMRY PEIQASFHAL RNTRGLPWPK DHEKKDDADL LEWLQALFGF QKDNVSNQRE HLILLLANVH IREMSKPDQQ SKLDDHALDI
0301: VMKKLFKNYK RWCKYLGRKS SLWLPTIQQE VQQRKLLYMG LYLLIWGEAA NLRFMPECLC YIYHHMAFEL YGMLAGNVSP TTGENVEPAY GGAEEAFLKK
0401: VVTPIYKIIE MEAERSKTIK SKHSHWRNYD DLNEYFWSRD CFRLGWPMRA DADFFKTPNF VLNTRDQENR PTGNDHWMGK VNFVEIRSFW HIFRSFDRMW
0501: SFLILSLQAM VIVAWNGGTP GDIFDAGVFK QVLSIFITAA VMKMGQAILD IVLSWKARKS MSLAVKLRYI LKLLSGAAWV VILPVTYAYT SDNPTGLNRT
0601: IKSWFGDGRN QPSLYILAVV VYLSPNMLAA TLFIFPVLRR FLEKSNLKVV ALIMWWSQPR LFVGRGMHEG AFSLFKYTMF WVVLLATKLV VSFYVEIRPL
0701: VQPTKDIMKV PITTFQWHEF FPHAKNNIGV VIALWAPIIL VYFMDTQIWY AIFSTLVGGI YGACRRLGEI RTLGMLRSRF ESLPKAFNDH LIPNDSKRRG
0801: FRSAFSSKPS KKPEDGKEED KIAARFAQIW NLIITSFRQE DLIDNREKDL LLVPYCKDRE MDMIQWPPFL LASKIPIALD MAADSGGKDR DLKKRMDSDP
0901: YFTYAIKECY ASFKNIIYAL VVGPRERDVI QKIFKVVDDL VAEDFLIKEL HMSNLPTLSK KFIELLEILQ KNNREDRGQV IILFQDMLEV VTRDIMEEQL
1001: QPIGLLETVH GGNNRKHEGI TPLDQQEQEQ LFTKAIEFPV KASDAWKEKI KRLHLLLTVK ESAMDVPTNL DARRRISFFA NSLFMDMPKA PKVRNMLPFS
1101: VLTPYYKEDV LFSSHALEEE NEDGVSILFY LQKIYPDEWK NFLERVDCKN EEELRETEQT EDELRLWASY RGQTLTRTVR GMMYYRQALV LQSCLDMARE
1201: DDLMEGFRAA DILSEESQLL TQCKAVADMK FTYVVSCQSY GIQKRSGDHH AQDILRLMTT YPSLRVAYID EVEETSKEGE ASKDRSKKIE KVYYSALVKA
1301: AVTKPDDPGQ KLDQDIYRIK LPGNAMLGEG KPENQNHAII FTRGEGLQTI DMNQEHYMEE TLKMRNLLQE FTKKHDGVRY PTILGVREHI FTGSVSSLAW
1401: FMSNQETSFV TIGQRVLANP LRVRFHYGHP DIFDRLFHLT RGGVSKASKI INLSEDIFAG FNSTLREGNV THHEYMQVGK GRDVGLNQIS LFEAKIAYGN
1501: GEQTLSRDIY RLGHRFDFFR MLSCYYTTIG FYFSTMITVW TVYVFLYGRL YLVLSGLDEG LATGRRFIHN NPLQVALASQ SFVQLGFLMA LPMMMEIGLE
1601: RGFRTALSDF VLMQLQLASV FFTFSLGTKT HYYGKTLLHG GAEYRATGRG FVVFHAKFAE NYRLYSRSHF VKGIELMILL IVFEIFGQSY RGAIAYIFIT
1701: FSMWFMVVTW LFAPFLFNPS GFEWQKIVDD WTDWNKWISN RGGIGVSPEK SWESWWEKEH EPLKYSGKRG TVLEIVLAVR FFIYQYGLVY HLNITKHTKS
1801: VLVYCLSWVV IFFILLVMKA VSVGRRKFSA EFQLVFRLLK GLIFIVFIST IVILIVIPHM TIQDIFVCIL AFMPTGWGLL LVAQALKPAI MRVGLWGSIR
1901: ALARGYEIIM GLLLFTPIAF LAWFPFVSEF QTRMLFNQAF SRGLQISRIL GGHKKDRAAR SKD
Best Arabidopsis Sequence Match ( AT5G13000.1 )
(BLAST)
0001: MSATRGGPDQ GPSQPQQRRI IRTQTAGNLG ESFDSEVVPS SLVEIAPILR VANEVESSNP RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE
0101: HDPTLMGRVK KSDAREMQSF YQHYYKKYIQ ALHNAADKAD RAQLTKAYQT ANVLFEVLKA VNLTQSIEVD REILEAQDKV AEKTQLYVPY NILPLDPDSA
0201: NQAIMRYPEI QAAVLALRNT RGLPWPEGHK KKKDEDMLDW LQEMFGFQKD NVANQREHLI LLLANVHIRQ FPKPDQQPKL DDQALTEVMK KLFKNYKKWC
0301: KYLGRKSSLW LPTIQQEMQQ RKLLYMALYL LIWGEAANLR FMPECLCYIY HHMAFELYGM LAGNVSPMTG ENVKPAYGGE EDAFLRKVVT PIYEVIQMEA
0401: QRSKKGKSKH SQWRNYDDLN EYFWSVDCFR LGWPMRADAD FFCLPVAVPN TEKDGDNSKP IVARDRWVGK VNFVEIRSFW HVFRSFDRMW SFYILCLQAM
0501: IIMAWDGGQP SSVFGADVFK KVLSVFITAA IMKLGQAVLD VILNFKAHQS MTLHVKLRYI LKVFSAAAWV IILPVTYAYS WKDPPAFART IKSWFGSAMH
0601: SPSLFIIAVV SYLSPNMLAG VMFLFPLLRR FLERSNYRIV MLMMWWSQPR LYVGRGMHES AFSLFKYTMF WVLLIATKLA FSYYIEIRPL VAPTQAIMKA
0701: RVTNFQWHEF FPRAKNNIGV VIALWAPIIL VYFMDSQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF ESLPGAFNDR LIPDGKNQQK KKGIRATLSH
0801: NFTEDKVPVN KEKEAARFAQ LWNTIISSFR EEDLISDREM DLLLVPYWAD RDLDLIQWPP FLLASKIPIA LDMAKDSNGK DRELKKRIES DTYMKCAVRE
0901: CYASFKNIIK FVVQGNREKE VIEIIFAEVD KHIDTGDLIQ EYKMSALPSL YDHFVKLIKY LLDNKEEDRD HVVILFQDML EVVTRDIMME DYNISSLVDS
1001: SHGGTWHGGM IPLEQQYQLF ASSGAIRFPI EPVTEAWKEK IKRIYLLLTT KESAMDVPSN LEARRRISFF SNSLFMDMPM APKVRNMLSF SVLTPYYTEE
1101: VLFSLRDLET PNEDGVSILF YLQKIFPDEW NNFLERVKCL SEEELKESDE LEEELRLWAS YRGQTLTRTV RGMMYYRKAL ELQAFLDMAM HEDLMEGYKA
1201: VELNSENNSR GERSLWAQCQ AVADMKFTYV VSCQQYGIHK RSGDPRAQDI LRLMTRYPSL RVAYIDEVEE PVKDKSKKGN QKVYYSVLVK VPKSTDHSTL
1301: AQNLDQVIYR IRLPGPAILG EGKPENQNHA IIFSRGEGLQ TIDMNQDNYM EEALKMRNLL QEFLTKHDGV RHPSILGLRE HIFTGSVSSL AWFMSNQETS
1401: FVTIGQRLLA NPLRVRFHYG HPDVFDRLFH LTRGGVSKAS KVINLSEDIF AGFNSTLREG NVTHHEYIQV GKGRDVGLNQ ISMFEAKIAN GNGEQTLSRD
1501: IYRLGHRFDF FRMMSCYFTT VGFYFSTLIT VLTVYIFLYG RLYLVLSGLE QGLSTQKGIR DNTPLQIALA SQSFVQIGFL MALPMLMEIG LERGFRTALS
1601: EFVLMQLQLA PVFFTFSLGT KTHYYGRTLL HGGAKYRSTG RGFVVFHAKF ADNYRLYSRS HFVKGLEMML LLVVYQIFGS AYRGVLAYLL ITISMWFMVG
1701: TWLFAPFLFN PSGFEWQKIV DDWTDWNKWI NNIGGIGVPA EKSWESWWEE EQEHLRYSGK RGIVVEILLA LRFFIYQYGL VYHLTITEKT KNFLVYGVSW
1801: LVIFLILFVM KTVSVGRRRF SASFQLMFRL IKGLIFMTFI AIIVILITLA HMTIQDIIVC ILAFMPTGWG MLLIAQACKP VVHRAGFWGS VRTLARGYEI
1901: VMGLLLFTPV AFLAWFPFVS EFQTRMLFNQ AFSRGLQISR ILGGHRKDRS SRNKE
Arabidopsis Description
CALS3Callose synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT9]
SUBAcon: [mitochondrion,plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.