Factsheet for Zm00001d050344_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045776_P001	Maize	cytosol	30.52	89.41
Zm00001d047143_P001	Maize	cytosol	73.49	42.96
GSMUA_Achr10P...	Banana	cytosol	14.06	42.68
Zm00001d014866_P002	Maize	cytosol, extracellular	21.69	31.03
Zm00001d018562_P003	Maize	golgi	20.48	8.64
Zm00001d016155_P001	Maize	plastid	37.35	8.49
Zm00001d044584_P006	Maize	plastid	56.63	7.31
Zm00001d035841_P002	Maize	cytosol, golgi, plasma membrane, plastid	38.15	7.06
Zm00001d044566_P006	Maize	cytosol	41.37	5.42
Zm00001d036351_P098	Maize	plastid	39.76	5.04
Zm00001d027392_P003	Maize	cytosol	38.15	4.96
Zm00001d030266_P001	Maize	cytosol	36.95	4.8
Zm00001d027472_P002	Maize	mitochondrion	36.55	4.68
Zm00001d043428_P005	Maize	cytosol, plastid	33.73	4.62
Zm00001d043909_P002	Maize	cytosol	31.73	4.44
Zm00001d014865_P001	Maize	cytosol	10.44	4.23
Zm00001d018565_P002	Maize	cytosol	10.44	4.0
Zm00001d045037_P001	Maize	cytosol	1.61	3.45
VIT_19s0138g00110.t01	Wine grape	nucleus	0.8	1.41
Zm00001d024113_P001	Maize	cytosol	0.4	0.74
Zm00001d030559_P001	Maize	mitochondrion	2.01	0.67
Zm00001d016156_P003	Maize	cytosol, peroxisome, plasma membrane	1.2	0.41
Zm00001d028611_P001	Maize	plastid	0.4	0.34
Zm00001d018560_P002	Maize	plastid	0.8	0.33
Zm00001d027474_P001	Maize	cytosol, peroxisome, plasma membrane	0.4	0.19
Zm00001d014867_P001	Maize	plastid	0.4	0.09
Zm00001d035842_P001	Maize	cytosol	0.0	0.0
Zm00001d041460_P001	Maize	mitochondrion, plasma membrane	0.0	0.0
Zm00001d027475_P001	Maize	mitochondrion, plastid	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.34	Gene3D:2.30.30.30	InterPro:40S_S4_C	MapMan:50.2.4	UniProt:A0A1D6Q188	ProteinID:AQK52380.1
GO:GO:0000148	GO:GO:0003674	GO:GO:0003735	GO:GO:0003824	GO:GO:0003843	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0005886
GO:GO:0005975	GO:GO:0006075	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_48	InterPro:IPR014722
InterPro:KOW	PFAM:PF00467	PFAM:PF02364	PFAM:PF16121	PANTHER:PTHR11581	PANTHER:PTHR11581:SF10
InterPro:Rib_L2_dom2	InterPro:Ribosomal_S4e	SMART:SM00739	UniParc:UPI0004DEA7D5	EnsemblPlantsGene:Zm00001d050344	EnsemblPlants:Zm00001d050344_P001
EnsemblPlants:Zm00001d050344_T001	SEG:seg	:	:	:	:

Description

Callose synthase 7

Coordinates

chr4:-:82553255..82555347

Molecular Weight (calculated)

28349.4 Da

IEP (calculated)

9.689

GRAVY (calculated)

-0.441

Length

249 amino acids

Sequence
(BLAST)

001: MMDEICNWAS YRGQILTRTV RGMMYYRKAL EIQCLQDMTD PAKVDQDRPI GSYQGLQSDI EMAQAIVDIK FTYVVSCQVY GMQKKSKDLN EKRRYQNILS
101: LMIMNPSLRV AFINEVEAPT RNGATEKTYY SVLVKGGEKY DEILERENLK TKIMDFIKFD VGNVVMVTGG RNTGRVGVIK NREKHKGSFE TIHVEDSVGH
201: QFATQMGNVF TIGKGNKPWV SLPKGRGIKL SIIEEQRRRD FIAQAAANA

Best Arabidopsis Sequence Match ( AT2G17360.1 )
(BLAST)

001: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVLIIRN RLKYALTYRE VISILMQRHI QVDGKVRTDK TYPAGFMDVV SIPKTNENFR
101: LLYDTKGRFR LHSIKDEEAK FKLCKVRSIQ FGQKGIPYLN TYDGRTIRYP DPLIKPNDTI KLDLEENKIV EFIKFDVGNV VMVTGGRNRG RVGVIKNREK
201: HKGSFETIHI QDSTGHEFAT RLGNVYTIGK GTKPWVSLPK GKGIKLTIIE EARKRLSAQQ A

Arabidopsis Description

RPS4A40S ribosomal protein S4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VH9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.