Factsheet for Bra016244.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 5
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38780	Canola	plasma membrane	98.32	97.67
AT1G69990.1	Thale cress	plasma membrane	78.86	79.53
Bra024650.1-P	Field mustard	plasma membrane	73.32	73.08
VIT_01s0026g01060.t01	Wine grape	plasma membrane	62.08	60.56
Solyc05g006570.1.1	Tomato	plasma membrane	59.06	57.7
PGSC0003DMT400058291	Potato	plasma membrane	59.4	57.56
Bra033046.1-P	Field mustard	cytosol	52.52	54.53
Bra025334.1-P	Field mustard	plasma membrane	50.5	50.67
Bra038824.1-P	Field mustard	cytosol	24.33	43.81
Zm00001d016331_P001	Maize	vacuole	16.11	42.86
Bra037490.1-P	Field mustard	plastid	32.89	41.88
Bra020705.1-P	Field mustard	plasma membrane	38.59	41.67
Bra037831.1-P	Field mustard	extracellular, plasma membrane, vacuole	16.11	35.16
Bra029968.1-P	Field mustard	extracellular	16.28	34.77
Bra040380.1-P	Field mustard	extracellular	13.59	34.47
Bra001255.1-P	Field mustard	plasma membrane	13.76	31.66
Zm00001d021202_P030	Maize	plastid	23.66	30.92
Zm00001d006033_P032	Maize	plastid	29.53	28.03
Bra006366.1-P	Field mustard	mitochondrion	14.6	26.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra016244	EnsemblPlants:Bra016244.1
EnsemblPlants:Bra016244.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4DIB7	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516
PRINTS:PR00019	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR44101	PANTHER:PTHR44101:SF4	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254191E
SEG:seg	:	:	:	:	:

Description

AT1G69990 (E=4e-240) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA07:-:18663561..18665351

Molecular Weight (calculated)

65329.3 Da

IEP (calculated)

6.690

GRAVY (calculated)

-0.057

Length

596 amino acids

Sequence
(BLAST)

001: MKNMMLMIST TFFIILISSS SSYAEDDVLC LKGLKNSLTD PSGRLSTWSF PNSSSSSICK LTGVSCWNAK ENRILSLHLP SMQLAGKIPE SLKLCRSLQS
101: LDLSGNDISG EIPPEICSWL PYLVTLDLSG NKLSGEIPSE IVNCKFLNGL ALNENKLTGP VPFQLTRLDR LQRLSLSDND LSGSIPLELS HFGENGFTGN
201: NGLCGKPLSS CGTLNGKNVT VIVIAGVTGA VGSLCVGFAV FWWFFIRDVR RKNGYGAGES KDDGDWIGVL KSHKLVQVAL FQKPIVKIRL VDLIVATDSF
301: GSDNVLVSSR TGVSYKADLP DGSALEVKRL TCGYEVGEKQ FRSEVNRLGQ IRHPNLVPLL GFCVVEDERL LVYKHMANGT LNSRLHGLDW PGRVRISVGA
401: ARGLAWLHHG CEHAYLHQYI SSNVILLDED FDPRVIDYGL GKLVSSSRDS NDSSFSNGDF GEVGYVAPEY ASTMVASLSG DVYAFGVVLL EIVTGQKPLS
501: INNGEDGFNG SLVDWVSKHL SNGRGKNVVD RSVIGKGYDD EMMQFLRIAC SCVVSRPKER PLMIQVYESL KKLGDRYGFF SEHSDEFPLI FNKQEH

Best Arabidopsis Sequence Match ( AT1G69990.1 )
(BLAST)

001: MKTISIFFVI ILMSSSHAED DVLCLKGFKS SLKDPSNQLN TWSFPNSSSS ICKLTGVSCW NAKENRILSL QLQSMQLSGQ IPESLKLCRS LQSLDLSFND
101: FSGLIPSQIC SWLPYLVTLD LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS ELSHYGEDGF RGNGGLCGKP
201: LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI
301: VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG
401: LAWLHHGCQP LYMHQYISSN VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI VLLEIVTGQK PVLINNGEEG
501: FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g69990 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.