Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P08610_001 | Banana | plasma membrane | 83.27 | 83.57 |
| GSMUA_Achr7P27510_001 | Banana | extracellular, plasma membrane | 67.97 | 75.79 |
| GSMUA_Achr3P30680_001 | Banana | extracellular, plasma membrane | 76.87 | 75.26 |
| GSMUA_Achr1P14260_001 | Banana | plastid | 79.0 | 73.03 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 70.46 | 72.0 |
| TraesCS5B01G161200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 69.04 | 68.31 |
| Solyc02g092040.1.1 | Tomato | extracellular | 64.77 | 68.16 |
| TraesCS5D01G168900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 69.39 | 67.94 |
| TraesCS5A01G163900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 69.39 | 67.94 |
| VIT_07s0151g00470.t01 | Wine grape | plasma membrane | 65.12 | 67.78 |
| HORVU0Hr1G012140.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 69.04 | 67.6 |
| PGSC0003DMT400093490 | Potato | extracellular | 64.06 | 67.42 |
| EES07661 | Sorghum | extracellular, plasma membrane | 68.33 | 67.37 |
| Zm00001d018344_P001 | Maize | extracellular, plasma membrane | 66.9 | 66.67 |
| KRH28321 | Soybean | extracellular, plasma membrane | 63.7 | 66.54 |
| Zm00001d052058_P001 | Maize | extracellular, plasma membrane | 65.84 | 66.07 |
| Os09t0131200-01 | Rice | plasma membrane | 65.48 | 65.25 |
| KRH77166 | Soybean | plasma membrane | 61.92 | 64.93 |
| AT3G49750.1 | Thale cress | extracellular, plasma membrane | 62.99 | 64.6 |
| CDY05959 | Canola | extracellular, plasma membrane | 63.35 | 64.49 |
| Bra029968.1-P | Field mustard | extracellular | 63.7 | 64.16 |
| Bra037831.1-P | Field mustard | extracellular, plasma membrane, vacuole | 60.5 | 62.27 |
| AT5G65830.1 | Thale cress | extracellular, plasma membrane | 60.5 | 60.93 |
| CDX81298 | Canola | extracellular, plasma membrane | 51.25 | 59.26 |
| CDY18672 | Canola | mitochondrion, plasma membrane | 50.53 | 58.44 |
| GSMUA_Achr6P28420_001 | Banana | golgi, plasma membrane | 26.69 | 18.94 |
| GSMUA_Achr2P05900_001 | Banana | cytosol | 28.47 | 16.63 |
| GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 19.57 | 13.72 |
| GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 13.52 | 9.09 |
| GSMUA_Achr6P28640_001 | Banana | plastid | 2.85 | 3.4 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr3G25790_001 | EnsemblPlants:GSMUA_Achr3P25790_001 | EnsemblPlants:GSMUA_Achr3T25790_001 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | UniProt:M0SHU5 | PFAM:PF08263 |
| PRINTS:PR00019 | PFscan:PS51450 | PANTHER:PTHR44839 | SUPFAM:SSF52058 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000294F22D | SEG:seg | : | : | : | : |
Description
inactive receptor kinase At1g27190 precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G25790_001]
Coordinates
chr3:+:25846803..25847648
Molecular Weight (calculated)
29909.4 Da
IEP (calculated)
6.237
GRAVY (calculated)
0.326
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPLPPLWWV ELLLSLQLVL LLPPPAVAES GDEACLSNLR RGLTDTNGSL RNWTRSNFAA PCNGFTSYLQ GVTCNNGRVY KLSLTSLALG GAISPFVANC
101: NNFQSLDLSS NQLEGPIPPE LSALLNLAVL NLSSNHLTGS IPPQLALCAY LNVIDLHANL LSGPIPDQLG LLARLSTFDV SYNRLSGPIP VLLANRSGPA
201: VGLPRFNASS FVGNWDLYGY PLPPIRPRGL SVLAIIGIGL GSGLLSLVLS FTAVCIWLRV TEQAAMTPGE EGKISHLMPD Y
101: NNFQSLDLSS NQLEGPIPPE LSALLNLAVL NLSSNHLTGS IPPQLALCAY LNVIDLHANL LSGPIPDQLG LLARLSTFDV SYNRLSGPIP VLLANRSGPA
201: VGLPRFNASS FVGNWDLYGY PLPPIRPRGL SVLAIIGIGL GSGLLSLVLS FTAVCIWLRV TEQAAMTPGE EGKISHLMPD Y
001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
Arabidopsis Description
AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.