Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P27510_001 | Banana | extracellular, plasma membrane | 78.05 | 88.89 |
GSMUA_Achr3P25790_001 | Banana | extracellular, plasma membrane, vacuole | 75.26 | 76.87 |
GSMUA_Achr2P08610_001 | Banana | plasma membrane | 74.56 | 76.43 |
GSMUA_AchrUn_... | Banana | plasma membrane | 70.73 | 73.82 |
Solyc02g092040.1.1 | Tomato | extracellular | 64.81 | 69.66 |
PGSC0003DMT400093490 | Potato | extracellular | 64.11 | 68.91 |
GSMUA_Achr1P14260_001 | Banana | plastid | 72.47 | 68.42 |
Os09t0131200-01 | Rice | plasma membrane | 66.9 | 68.09 |
TraesCS5B01G161200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 67.25 | 67.96 |
TraesCS5D01G168900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 67.6 | 67.6 |
TraesCS5A01G163900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 67.6 | 67.6 |
EES07661 | Sorghum | extracellular, plasma membrane | 66.9 | 67.37 |
HORVU0Hr1G012140.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 67.25 | 67.25 |
Zm00001d052058_P001 | Maize | extracellular, plasma membrane | 65.51 | 67.14 |
VIT_07s0151g00470.t01 | Wine grape | plasma membrane | 63.07 | 67.04 |
KRH28321 | Soybean | extracellular, plasma membrane | 62.72 | 66.91 |
Zm00001d018344_P001 | Maize | extracellular, plasma membrane | 64.81 | 65.96 |
AT3G49750.1 | Thale cress | extracellular, plasma membrane | 62.37 | 65.33 |
KRH77166 | Soybean | plasma membrane | 60.98 | 65.3 |
Bra029968.1-P | Field mustard | extracellular | 63.41 | 65.23 |
CDY05959 | Canola | extracellular, plasma membrane | 61.32 | 63.77 |
Bra037831.1-P | Field mustard | extracellular, plasma membrane, vacuole | 60.28 | 63.37 |
CDX81298 | Canola | extracellular, plasma membrane | 51.92 | 61.32 |
AT5G65830.1 | Thale cress | extracellular, plasma membrane | 59.58 | 61.29 |
CDY18672 | Canola | mitochondrion, plasma membrane | 51.22 | 60.49 |
GSMUA_Achr6P28420_001 | Banana | golgi, plasma membrane | 27.18 | 19.7 |
GSMUA_Achr2P05900_001 | Banana | cytosol | 28.22 | 16.84 |
GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 21.6 | 15.46 |
GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 13.24 | 9.09 |
GSMUA_Achr6P28640_001 | Banana | plastid | 3.14 | 3.83 |
Protein Annotations
Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr3G30680_001 | EnsemblPlants:GSMUA_Achr3P30680_001 | EnsemblPlants:GSMUA_Achr3T30680_001 | InterPro:IPR001611 |
InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_4 | UniProt:M0SJ82 |
PFAM:PF08263 | PFAM:PF12799 | PRINTS:PR00019 | PFscan:PS51450 | PANTHER:PTHR44839 | SUPFAM:SSF52058 |
SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000295B903 | SEG:seg | : | : |
Description
inactive receptor kinase At1g27190 precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G30680_001]
Coordinates
chr3:-:29313791..29314654
Molecular Weight (calculated)
30026.5 Da
IEP (calculated)
5.257
GRAVY (calculated)
0.331
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRPPRVAE LLLLLPSLLL LLLLPQQVVS DPDDEACLSN LRSSLTDPNG SLRNWTADTF AAPCNGFTSY LEGVTCNNGR VYKLSLQGLS LGGALSTSLA
101: NCTNLQSLDL SSNALSGAIP PELASLLNLA VLNLSSNRLS GRIPPELALC SYLNVLDLHA NLLTGLIPDQ LGLLVRLSTF DVSDNRLEGP IPALLANRTA
201: VGGAGAAALP RFNASSFVGN KDLYGYPLPP KRGGGLSVLA IVGIGVGSGL LSLVLSFTAV CVWLRVTEKA APMPGEEGKI SHLMPDY
101: NCTNLQSLDL SSNALSGAIP PELASLLNLA VLNLSSNRLS GRIPPELALC SYLNVLDLHA NLLTGLIPDQ LGLLVRLSTF DVSDNRLEGP IPALLANRTA
201: VGGAGAAALP RFNASSFVGN KDLYGYPLPP KRGGGLSVLA IVGIGVGSGL LSLVLSFTAV CVWLRVTEKA APMPGEEGKI SHLMPDY
001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
Arabidopsis Description
AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.