Factsheet for VIT_16s0039g01990.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g01270.t01	Wine grape	cytosol	56.83	54.46
VIT_00s0220g00120.t01	Wine grape	plasma membrane	24.84	12.88
VIT_00s2085g00010.t01	Wine grape	plasma membrane	24.22	12.6
Zm00001d021202_P030	Maize	plastid	17.39	12.28
Zm00001d016331_P001	Maize	vacuole	7.45	10.71
VIT_01s0026g01060.t01	Wine grape	plasma membrane	19.57	10.31
VIT_14s0066g02250.t01	Wine grape	plasma membrane	18.32	9.62
Zm00001d006033_P032	Maize	plastid	17.7	9.08
VIT_05s0094g01290.t01	Wine grape	mitochondrion	1.24	3.12
VIT_07s0151g00470.t01	Wine grape	plasma membrane	1.55	1.85
PGSC0003DMT400085762	Potato	extracellular	0.0	0.0
Solyc11g015910.1.1	Tomato	extracellular	0.0	0.0
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:35.1	ProteinID:CCB50601	ProteinID:CCB50601.1	UniProt:F6HEF5	EMBL:FN595750
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFscan:PS50011	PANTHER:PTHR44101
PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	UniParc:UPI0002109082	ArrayExpress:VIT_16s0039g01990	EnsemblPlantsGene:VIT_16s0039g01990
EnsemblPlants:VIT_16s0039g01990.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr16:+:2033071..2040594

Molecular Weight (calculated)

36142.0 Da

IEP (calculated)

4.157

GRAVY (calculated)

-0.331

Length

322 amino acids

Sequence
(BLAST)

001: MFLVGHGNIN LKCILLDQNF EPQISNFGGT TLMKSSITDS TWGLFVGSAD TENKRVQCPL KKDVYSSGII LLEMVTGKKP HKISDASRRF DGTLVDWINH
101: LLSTSGLYDT IDKSLIGQGF DGEIFEFLKV ACSCVKASPH QRPTMLEVDK ILRNTVGRHQ IDDDSESWTQ NECGTSNDRD EYTDILILIL CTATISDSRR
201: PLPYHVQQPL MNDQTTDHSL SEDDIKARLS SLFTDNDIEA SVPYLFTEDD IEAWVSFLCS PTDDDENPIS SITKHSHSFS EDDIKAWVSS LFTDNDIEAW
301: VSFLFTDDDI EASIPSLFTD DD

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.