Factsheet for HORVU1Hr1G049910.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G038060.2	Barley	cytosol	64.74	99.62
TraesCS1B01G192400.1	Wheat	cytosol	94.72	95.42
TraesCS1A01G190300.1	Wheat	cytosol	93.98	94.68
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	3.93	94.12
HORVU1Hr1G060370.1	Barley	cytosol	92.14	92.94
HORVU1Hr1G060340.2	Barley	cytosol	92.14	92.25
HORVU4Hr1G072010.4	Barley	cytosol	91.77	91.66
HORVU4Hr1G071960.2	Barley	cytosol	91.89	91.55
EER92840	Sorghum	cytosol	90.91	91.36
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	90.66	91.22
EER94171	Sorghum	cytosol	90.66	91.11
Zm00001d032859_P006	Maize	plasma membrane	90.66	91.11
Zm00001d014124_P001	Maize	cytosol, plasma membrane	90.66	91.0
HORVU0Hr1G006340.1	Barley	cytosol	80.22	82.87
GSMUA_Achr3P00260_001	Banana	cytosol	48.65	81.15
HORVU3Hr1G029450.1	Barley	cytosol	80.34	80.94
HORVU3Hr1G029440.1	Barley	cytosol	80.34	80.34
HORVU5Hr1G069560.1	Barley	cytosol	18.06	69.34
HORVU6Hr1G053620.1	Barley	cytosol	30.47	69.08
HORVU2Hr1G011690.1	Barley	cytosol	65.23	64.44
HORVU2Hr1G086170.2	Barley	cytosol	28.5	40.77
HORVU3Hr1G067470.2	Barley	cytosol	10.93	39.21
HORVU6Hr1G049800.1	Barley	cytosol	2.33	33.93
HORVU2Hr1G107280.1	Barley	cytosol	14.74	32.43
HORVU6Hr1G083150.1	Barley	cytosol	16.83	32.16
HORVU6Hr1G032570.5	Barley	cytosol	16.09	32.03
HORVU2Hr1G014000.1	Barley	cytosol	15.97	31.71
HORVU7Hr1G119300.13	Barley	cytosol	15.6	31.59
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	14.86	31.51
HORVU7Hr1G002880.2	Barley	plastid	30.47	30.96
HORVU7Hr1G090380.3	Barley	cytosol	16.46	30.73
HORVU7Hr1G032070.1	Barley	cytosol	16.71	30.63
HORVU7Hr1G084550.2	Barley	cytosol	14.86	28.61
HORVU0Hr1G013350.2	Barley	cytosol	10.69	28.25
HORVU4Hr1G055060.1	Barley	cytosol	15.6	28.22
HORVU4Hr1G016200.10	Barley	cytosol, plastid	33.91	27.44
HORVU1Hr1G015310.16	Barley	cytosol, plastid	33.29	26.97
HORVU2Hr1G014770.2	Barley	cytosol, plastid	14.5	26.76
HORVU6Hr1G036990.7	Barley	cytosol	14.86	26.19
HORVU2Hr1G104530.9	Barley	cytosol	26.04	23.22
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	6.39	20.72
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	6.14	19.92
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	22.48	16.53
HORVU5Hr1G078590.8	Barley	plastid	22.6	16.28

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	UniProt:A0A287FHV9
InterPro:AAA+_ATPase	InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:HORVU1Hr1G049910	EnsemblPlants:HORVU1Hr1G049910.1	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF122
SMART:SM00382	SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585
TIGRFAMs:TIGR01243	UniParc:UPI000B48492D	InterPro:Vps4_C	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:369664686..369667130

Molecular Weight (calculated)

90490.0 Da

IEP (calculated)

4.937

GRAVY (calculated)

-0.372

Length

814 amino acids

Sequence
(BLAST)

001: ISNPRPMAIH GEPSSSDPSG KKDYSTAILE RKKSPNRLVV DEATRDDNSA VALHPDTIDR LQLFTGDTLL LKGKKRKDTV CIALPDDTCE HTKIRMNKVV
101: RKNLRVRLGD VVSIHQCPDV KYGKRVHVLP IDDTVEGIDG NLFEAFLRPY FLEAYRPVRK GDLFLVRGGM TSVEFKVIET DPAEYCIVAP DTEIFCDGEP
201: VRREDEEKLD DVGYDDVGGV RKQMAQIREL VELPLRHPQL FKSIGVKPPK GILLYGPPGT GKTLIARAVA NETGAFFFLI NGPEIMSKLA GESESNLRKA
301: FEEAEKNAPA IIFIDEIDSI APKRDKTNGE VERRIVSQLL TLMDGLKSRA HVIVMGATNR PNSIDPALRR FGRFDREIDI GVPDEVGRLE VLRIHTKNMK
401: LAEDVELEHV SRDTHGYVGA DLAALCTEAA LQCIREKMDV IDLEDDTIDA EILNSMAVTN DHFKIALGTS NPSALRETVV EVPNVSWEDI GGLETVKKEL
501: QETVQYPVEH PEKFEKFGMS PSKGVLFYGP PGCGKTLLAK AIANECQANF ISIKGPELLT MWFGESEANV REIFDKARGS APCVLFFDEL DSIATQRGNS
601: VGDAGGAADR VLNQLLTEMD GMNAKKTVFI IGATNRPDII DPALLRPGRL DQLIYIPLPD VESRLQIFRA CLRKSPVAKD VDLNALAKYT QGFSGADITE
701: ICQRACKYAI RENIEKDMEK ERRRKENPEA MEEDEMDEIA EIKASHFEES MRYARRSVSD ADIRKYQAFA QTLQQSRGFG SQFRFPDQPV AGATTATDPF
801: ASAAVAAEDD DLYS

Best Arabidopsis Sequence Match ( AT5G03340.1 )
(BLAST)

001: MSNEPESSDS KTKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPTTM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS

Arabidopsis Description

CDC48ECell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.