Factsheet for HORVU1Hr1G060340.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G060370.1	Barley	cytosol	99.26	100.0
HORVU0Hr1G038060.2	Barley	cytosol	61.87	95.09
TraesCS1B01G235400.1	Wheat	cytosol	74.78	94.7
TraesCS1D01G223800.1	Wheat	cytosol	92.99	94.5
TraesCS1B01G235300.1	Wheat	cytosol	92.99	94.5
TraesCS1D01G253100.1	Wheat	cytosol	92.74	94.25
TraesCS1A01G222100.1	Wheat	cytosol	92.74	94.25
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	3.94	94.12
TraesCS1B01G235500.1	Wheat	cytosol	92.25	93.75
TraesCSU01G001000.1	Wheat	cytosol	92.37	93.52
HORVU1Hr1G049910.1	Barley	cytosol	92.25	92.14
HORVU4Hr1G071960.2	Barley	cytosol	91.27	90.82
HORVU4Hr1G072010.4	Barley	cytosol	90.77	90.55
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	89.79	90.23
Zm00001d014124_P001	Maize	cytosol, plasma membrane	89.79	90.01
EER94171	Sorghum	cytosol	89.67	90.0
EER92840	Sorghum	cytosol	89.67	90.0
Zm00001d032859_P006	Maize	plasma membrane	89.42	89.75
HORVU0Hr1G006340.1	Barley	cytosol	79.21	81.73
GSMUA_Achr3P00260_001	Banana	cytosol	48.95	81.56
HORVU3Hr1G029450.1	Barley	cytosol	79.58	80.07
HORVU3Hr1G029440.1	Barley	cytosol	79.58	79.48
HORVU6Hr1G053620.1	Barley	cytosol	30.87	69.92
HORVU5Hr1G069560.1	Barley	cytosol	18.08	69.34
HORVU2Hr1G011690.1	Barley	cytosol	65.44	64.56
HORVU2Hr1G086170.2	Barley	cytosol	28.66	40.95
HORVU3Hr1G067470.2	Barley	cytosol	10.82	38.77
HORVU6Hr1G049800.1	Barley	cytosol	2.34	33.93
HORVU2Hr1G107280.1	Barley	cytosol	14.64	32.16
HORVU6Hr1G032570.5	Barley	cytosol	16.11	32.03
HORVU6Hr1G083150.1	Barley	cytosol	16.73	31.92
HORVU7Hr1G119300.13	Barley	cytosol	15.62	31.59
HORVU2Hr1G014000.1	Barley	cytosol	15.87	31.46
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	14.76	31.25
HORVU7Hr1G002880.2	Barley	plastid	30.38	30.84
HORVU7Hr1G090380.3	Barley	cytosol	16.48	30.73
HORVU7Hr1G032070.1	Barley	cytosol	16.61	30.41
HORVU7Hr1G084550.2	Barley	cytosol	14.76	28.37
HORVU4Hr1G055060.1	Barley	cytosol	15.5	28.0
HORVU0Hr1G013350.2	Barley	cytosol	10.46	27.6
HORVU4Hr1G016200.10	Barley	cytosol, plastid	33.95	27.44
HORVU1Hr1G015310.16	Barley	cytosol, plastid	33.33	26.97
HORVU2Hr1G014770.2	Barley	cytosol, plastid	14.51	26.76
HORVU6Hr1G036990.7	Barley	cytosol	14.64	25.76
HORVU2Hr1G104530.9	Barley	cytosol	26.2	23.33
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	6.15	19.92
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	5.9	19.12
HORVU5Hr1G078590.8	Barley	plastid	22.51	16.19
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	22.02	16.17

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	UniProt:A0A287FUJ6
InterPro:AAA+_ATPase	InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:HORVU1Hr1G060340	EnsemblPlants:HORVU1Hr1G060340.2	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF122	SMART:SM00382
SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	TIGRFAMs:TIGR01243
UniParc:UPI000B484D57	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:438865496..438867937

Molecular Weight (calculated)

90544.1 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.405

Length

813 amino acids

Sequence
(BLAST)

001: GKQSNRIETN ARPMARQGDP SGKKDYSTAI LERKRSPNRL EVDETTDDEN SVVALHPDTM DSLQLFRGDT VLLKGKKRRD TVCILLPDDT CDKAKVRMNR
101: VVRKNLRVRL GDVVSVHQCP DVRYGKRVHV LPVDDTVQGM TGNLFDAFLR PYFLEAYRPL RKGDLFLVRG GMTSVEFKVV ETDPAEYCIV APDTEVFCDG
201: EPVKREDEER LDDVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GTGKTLIARA VANETGAFFF LINGPEIMSK LAGESESNLR
301: KAFEEAEKNA PAIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEVGR LEVLRIHTKN
401: MKLAEDVELE HVSRDTHGYV GADLAALCTE AALQCIREKM DIIDLEDDTI DAEILNSMAV TNDHFKIALG TSNPSALRET MVEVPNVSWE DIGGLESVKR
501: ELQETVQYPV EHPEKFEKFG MAPSKGVLFY GPPGCGKTLL AKAIANECQA NFISIKGPEL LTMWFGESEA NVREIFDKAR GSAPCVLFFD ELDSIATKRG
601: SSVGDAGGAA DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDPALLRPG RLDQLIYIPL PDVESRLQIF RACLRKSPVA KDVDLNALAK YTQGFSGADI
701: TEICQRACKY AIRENIEKDM EKERRRKDNP EAMEEDEVDE IRAAHLEESM RYARRSVSDA DIRKYQAFAQ TLQQSRGFGT EFRFPDRPVG GATAAADPFA
801: SAATAAEEDD LYS

Best Arabidopsis Sequence Match ( AT5G03340.1 )
(BLAST)

001: MSNEPESSDS KTKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPTTM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS

Arabidopsis Description

CDC48ECell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.