Factsheet for HORVU4Hr1G072010.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G267800.1	Wheat	cytosol	99.14	99.39
TraesCS4B01G268400.1	Wheat	golgi	98.9	99.14
TraesCS4A01G035700.1	Wheat	plastid	98.77	99.02
HORVU4Hr1G071960.2	Barley	cytosol	98.4	98.16
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	4.05	97.06
EER92840	Sorghum	cytosol	94.97	95.56
Zm00001d014124_P001	Maize	cytosol, plasma membrane	94.97	95.44
EER94171	Sorghum	cytosol	94.72	95.31
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	94.6	95.3
Zm00001d032859_P006	Maize	plasma membrane	94.23	94.81
HORVU0Hr1G038060.2	Barley	cytosol	60.61	93.38
HORVU1Hr1G049910.1	Barley	cytosol	91.66	91.77
HORVU1Hr1G060370.1	Barley	cytosol	90.55	91.45
HORVU1Hr1G060340.2	Barley	cytosol	90.55	90.77
HORVU0Hr1G006340.1	Barley	cytosol	81.72	84.52
GSMUA_Achr3P00260_001	Banana	cytosol	50.31	84.02
HORVU3Hr1G029450.1	Barley	cytosol	81.72	82.43
HORVU3Hr1G029440.1	Barley	cytosol	81.72	81.82
HORVU6Hr1G053620.1	Barley	cytosol	30.55	69.36
HORVU5Hr1G069560.1	Barley	cytosol	18.04	69.34
HORVU2Hr1G011690.1	Barley	cytosol	65.15	64.44
HORVU2Hr1G086170.2	Barley	cytosol	28.22	40.42
HORVU3Hr1G067470.2	Barley	cytosol	10.8	38.77
HORVU6Hr1G049800.1	Barley	cytosol	2.33	33.93
HORVU6Hr1G083150.1	Barley	cytosol	17.18	32.86
HORVU6Hr1G032570.5	Barley	cytosol	16.44	32.76
HORVU7Hr1G119300.13	Barley	cytosol	16.07	32.59
HORVU2Hr1G107280.1	Barley	cytosol	14.6	32.16
HORVU2Hr1G014000.1	Barley	cytosol	15.95	31.71
HORVU7Hr1G090380.3	Barley	cytosol	16.81	31.42
HORVU7Hr1G002880.2	Barley	plastid	30.8	31.34
HORVU7Hr1G032070.1	Barley	cytosol	17.06	31.31
HORVU6Hr1G087650.1	Barley	cytosol, plasma membrane	14.72	31.25
HORVU7Hr1G084550.2	Barley	cytosol	15.46	29.79
HORVU0Hr1G013350.2	Barley	cytosol	10.67	28.25
HORVU4Hr1G055060.1	Barley	cytosol	15.58	28.22
HORVU4Hr1G016200.10	Barley	cytosol, plastid	33.5	27.14
HORVU2Hr1G014770.2	Barley	cytosol, plastid	14.6	26.98
HORVU6Hr1G036990.7	Barley	cytosol	15.21	26.84
HORVU1Hr1G015310.16	Barley	cytosol, plastid	32.88	26.67
HORVU2Hr1G104530.9	Barley	cytosol	26.14	23.33
HORVU3Hr1G095530.3	Barley	mitochondrion, plastid	6.5	21.12
HORVU1Hr1G091080.1	Barley	mitochondrion, plastid	6.26	20.32
HORVU7Hr1G058410.7	Barley	cytosol, peroxisome	23.07	16.98
HORVU5Hr1G078590.8	Barley	plastid	22.58	16.28

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	UniProt:A0A287PLI5
InterPro:AAA+_ATPase	InterPro:AAA_ATPase_CDC48	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf
InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:HORVU4Hr1G072010	EnsemblPlants:HORVU4Hr1G072010.4	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	PFAM:PF09336	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF122
SMART:SM00382	SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585
TIGRFAMs:TIGR01243	UniParc:UPI000B484E5F	InterPro:Vps4_C	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:+:582930919..582935036

Molecular Weight (calculated)

90429.7 Da

IEP (calculated)

4.942

GRAVY (calculated)

-0.378

Length

815 amino acids

Sequence
(BLAST)

001: MAAPTPQGEA SSSDPKSKKD YSTAILERKK SPNRLVVDEA TNDDNSVVAL HPDTMERLQL FRGDTVLLKV RGKKRKDTIC IVLADDTCEE PKIRMNKTVR
101: KNLRVRLGDV VSVHQCPDVK YGKRVHILPI DDTVEGITGN LFDAFLKPYF LEAYRPLRKG DLFLVRGGMR SVEFKVIETD PAEYCIVAPD TEIFCDGEPV
201: KREDEERLDD VGYDDVGGVR KQMAQIRELV ELPLRHPQLF KSIGVKPPKG ILLFGPPGSG KTLIARAVAN ETGAFFFLIN GPEIMSKLAG ESESNLRKAF
301: EEAEKNAPSI IFIDEIDSIA PKREKTNGEV ERRIVSQLLT LMDGLKSRAH VIVMGATNRP NSIDPALRRF GRFDREIDIG VPDEVGRLEV LRIHTKNMKL
401: AEDVELEHIS RDTHGYVGAD LAALCTEAAL QCIREKMDII DLEDETIDAE ILNSMAVTND HFKTALTTSN PSALRETVVE VPNVSWEDIG GLENVKRELQ
501: ETVQYPVEHP EKFEKFGMSP SKGVLFYGPP GCGKTLLAKA IANECQANFI SIKGPELLTM WFGESEANVR EIFDKARGSA PCVLFFDELD SIATQRGSSS
601: GDAGGAADRV LNQLLTEMDG MNAKKTVFII GATNRPDIID PALLRPGRLD QLIYIPLPDV DSRHQIFKAC LRKSPLAKDI DLSALAKYTQ GFSGADITEI
701: CQRACKYAIR ENIEKDIERE RRRKDNPEAM EEDEVDEVAE IRAAHFEESM KYARRSVSDA DIRKYQAFAQ TLQQSRGFGS EFRFADQPAA GAASAAAADP
801: FASAASAADD DDLYS

Best Arabidopsis Sequence Match ( AT5G03340.1 )
(BLAST)

001: MSNEPESSDS KTKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPTTM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS

Arabidopsis Description

CDC48ECell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.