CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56690.1	KRG89812	AT3G56800.1	11346951
AT3G56690.1	KRG94975	AT3G56800.1	11346951
AT3G56690.1	KRH18664	AT3G56800.1	11346951

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95054	Soybean	plastid	67.11	91.05
PGSC0003DMT400018483	Potato	cytosol	27.06	69.02
VIT_08s0040g00910.t01	Wine grape	cytosol	61.38	60.62
GSMUA_Achr6P29120_001	Banana	cytosol	33.84	59.0
Solyc10g078320.1.1	Tomato	nucleus	54.68	57.95
CDX72118	Canola	plastid	51.91	57.52
AT3G56690.1	Thale cress	cytosol, plastid	53.63	54.89
CDY56774	Canola	plastid	53.06	54.52
Bra007262.1-P	Field mustard	plastid	50.76	54.18
EES09632	Sorghum	cytosol, plastid	44.46	47.06
Zm00001d049140_P006	Maize	cytosol, plastid	44.74	46.57
TraesCS1B01G089700.1	Wheat	cytosol, plastid	43.4	46.28
KRG99061	Soybean	cytosol	8.8	46.0
HORVU1Hr1G015310.16	Barley	cytosol, plastid	44.07	45.87
TraesCS4B01G108300.1	Wheat	plastid	43.79	45.8
TraesCS1D01G073600.1	Wheat	cytosol, plastid	43.98	45.77
TraesCS4A01G204700.1	Wheat	cytosol, plastid	43.98	45.73
TraesCS1A01G071300.1	Wheat	cytosol, plastid	43.88	45.67
HORVU4Hr1G016200.10	Barley	cytosol, plastid	43.59	45.33
TraesCS4D01G105500.2	Wheat	cytosol, plastid	43.4	45.13
KRG94277	Soybean	cytosol	8.32	42.03
KRH70928	Soybean	cytosol	20.65	35.64
KRH25081	Soybean	cytosol, endoplasmic reticulum, mitochondrion	23.8	34.39
KRH26511	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	26.48	34.32
KRH22853	Soybean	cytosol, endoplasmic reticulum, mitochondrion	26.48	34.32
KRH67721	Soybean	endoplasmic reticulum, nucleus	26.48	34.28
KRH63585	Soybean	endoplasmic reticulum	26.58	34.15
KRG96011	Soybean	endoplasmic reticulum, mitochondrion, nucleus	26.29	34.03
KRH30601	Soybean	cytosol	26.1	33.87
KRH19916	Soybean	endoplasmic reticulum, mitochondrion	26.2	33.79
KRH54357	Soybean	cytosol, endoplasmic reticulum, mitochondrion	26.29	33.78
KRH32530	Soybean	endoplasmic reticulum, mitochondrion	26.2	33.7
KRH45638	Soybean	cytosol	10.32	33.64
KRH44049	Soybean	nucleus	24.0	31.73
KRG97280	Soybean	cytosol, nucleus	12.91	31.69
KRH06311	Soybean	cytosol	12.91	31.69
KRH69005	Soybean	nucleus	12.91	31.69
KRH47728	Soybean	cytosol, nucleus	12.91	31.69
KRH61120	Soybean	endoplasmic reticulum	11.95	31.41
KRH51796	Soybean	cytosol	11.95	31.41
KRH05868	Soybean	cytosol, nucleus	11.95	31.33
KRH15139	Soybean	cytosol, endoplasmic reticulum, nucleus	11.95	31.33
KRH33891	Soybean	endoplasmic reticulum, nucleus	11.76	29.08
KRG92899	Soybean	cytosol, nucleus	11.76	29.08
KRH68501	Soybean	nucleus	11.66	28.71
KRG98107	Soybean	cytosol	11.47	28.44
KRH30673	Soybean	cytosol, nucleus	11.47	28.37
KRH30674	Soybean	cytosol, nucleus	11.19	28.33
KRG95799	Soybean	cytosol, nucleus	11.95	28.03
KRH67524	Soybean	nucleus	11.95	28.03
KRH32292	Soybean	cytosol, nucleus	11.85	27.99
KRH19693	Soybean	cytosol	11.85	27.99
KRH45565	Soybean	endoplasmic reticulum	5.45	27.94
KRH06953	Soybean	cytosol	7.17	27.78
KRH46990	Soybean	nucleus	11.09	27.75
KRH44668	Soybean	cytosol, mitochondrion, nucleus	11.09	27.75
KRH10420	Soybean	mitochondrion	13.0	27.47
KRH51488	Soybean	mitochondrion	10.61	26.24
KRG96790	Soybean	mitochondrion	7.93	25.0
KRG96401	Soybean	mitochondrion	21.03	23.94
KRH68139	Soybean	cytosol	14.91	23.28
KRH00031	Soybean	plastid	7.65	23.19
KRH50491	Soybean	cytosol	20.84	19.29

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100788600	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0KQA1	InterPro:AAA+_ATPase
EMBL:ACUP02002006	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlantsGene:GLYMA_03G123500	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EnsemblPlants:KRH66707	ProteinID:KRH66707	ProteinID:KRH66707.1	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF27	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI00023C1766	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:33639387..33646910

Molecular Weight (calculated)

113945.0 Da

IEP (calculated)

5.641

GRAVY (calculated)

-0.188

Length

1046 amino acids

Sequence
(BLAST)

0001: MPSSSSNSKQ KKKQSKVLQK HSSLSSNGTT SPSKTLQPSE LTSFCEEASR KFSSLIAKSA FVAELTHVDD TVPVSNRIWL SAPSMLSLSF SPASTVSVSI
0101: PSSGEKSSQL HSFPLASLAD ECEKFYELES SKAFDDYAGN YFVLATVFPS SKVLKNGVRL SSNLYYAMGC PPLGTSVFVH PIQKSLANGS NEQHSTENNC
0201: LPIYNCKELY LQLVPSKNGL PLKFNNFPSS GMSKVKSHVQ SENDIIASPA TPSNGSKFSN AIGMSSPLFD DSASSVPNLN SQSLNSFDVS LALRDESSKE
0301: ILLTGAKPWL YSRSLLLGNL VNVPMLSELC FFQVIGAKKQ PVTKSDHCPS NGNSDLYPED SDIAESVNQA FTVNDETKVF LSLPSNAASE EPIQRDIPCV
0401: KLEHKVANAS LHDKISKLGG LSKEYTLLKD IISSSVSDAL SSFGLRTTRG VLLHGPPGTG KTSLAQLCAH DVGVKFFPIN GPEIVTQYYG ESEQQLHELF
0501: DSAIQAAPAV VFIDELDAIA PARKDGGEEL SQRLVATLLN LVDGISRSEG LLVIAATNRP DHIEPALRRP GRFDKEIEIG VPSPNQRSDI LLTLLSEMDH
0601: SLAELQIENL ATVTHGFVGA DLAALCNEAA LICLRRYANF KKTYDSCSDY ITEQPALMNG ATNSIDHSGD ATSSVSDMSV ASSRVLPSCM IGMTSEAMEI
0701: IPDSGEEEQI LKVSFEDFQK ARMKIRPSAM REVILEVPKV NWEDVGGQKE VKAQLMEAVE WPQKHHDAFN RIGTRPPTGV LMFGPPGCSK TLMARAVASE
0801: AGLNFLAVKG PELFSKWVGE SEKAVRSLFA KARANAPSIV FFDEIDSLAV TRGKESDGVS VSDRVMSQLL VELDGLHQRV NVTVIAATNR PDKIDPALLR
0901: PGRFDRLLYV GPPNEVDREE IFRIHLRKIP CGSDVSLKEL ARLTDGCTGA DISLICREAA VAAIEESLDA SVITMEHLKM AIKQIQPSEV HSYQKLSTKF
1001: QRAVRCCDIK DEFNDMPCDS RSTQFSICDW AHVHYMGIIC PANWLD

Best Arabidopsis Sequence Match ( AT3G56690.1 )
(BLAST)

0001: MPSKKKQSRT PSRLSNSEPP ASPRTPASST TSRDTDSINE EELRRSIEEA SAAFPCLLGK SAIIARVADV ASESIRGSKI WLSETSMVAA SLSPGSTVSV
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS

Arabidopsis Description

CIP111Calmodulin-interacting protein 111 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET7]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.