Factsheet for Bra007262.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003251.1-P
Bra007269.1-P
Bra014671.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56690.1	Bra003251.1-P	AT3G56800.1	11346951
AT3G56690.1	Bra007269.1-P	AT3G56800.1	11346951
AT3G56690.1	Bra014671.1-P	AT3G56800.1	11346951

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56774	Canola	plastid	97.76	94.11
CDX72118	Canola	plastid	88.27	91.63
AT3G56690.1	Thale cress	cytosol, plastid	82.96	79.55
PGSC0003DMT400018483	Potato	cytosol	28.06	67.07
GSMUA_Achr6P29120_001	Banana	cytosol	35.0	57.17
VIT_08s0040g00910.t01	Wine grape	cytosol	58.37	54.01
Solyc10g078320.1.1	Tomato	nucleus	52.86	52.48
KRH66707	Soybean	plastid	54.18	50.76
KRG95054	Soybean	plastid	37.76	47.99
EES09632	Sorghum	cytosol, plastid	45.51	45.14
Zm00001d049140_P006	Maize	cytosol, plastid	45.1	43.98
TraesCS4A01G204700.1	Wheat	cytosol, plastid	44.59	43.44
TraesCS1B01G089700.1	Wheat	cytosol, plastid	43.37	43.32
HORVU1Hr1G015310.16	Barley	cytosol, plastid	44.39	43.28
TraesCS4D01G105500.2	Wheat	cytosol, plastid	44.39	43.24
TraesCS4B01G108300.1	Wheat	plastid	44.08	43.2
HORVU4Hr1G016200.10	Barley	cytosol, plastid	44.18	43.04
TraesCS1A01G071300.1	Wheat	cytosol, plastid	43.98	42.89
TraesCS1D01G073600.1	Wheat	cytosol, plastid	43.98	42.89
Bra005023.1-P	Field mustard	cytosol	9.18	37.66
Bra017378.1-P	Field mustard	cytosol	20.92	34.0
Bra029795.1-P	Field mustard	cytosol	26.63	32.26
Bra001297.1-P	Field mustard	cytosol	26.53	32.14
Bra003123.1-P	Field mustard	cytosol	26.53	32.1
Bra034089.1-P	Field mustard	cytosol	26.53	32.1
Bra006978.1-P	Field mustard	cytosol	26.12	31.57
Bra033655.1-P	Field mustard	cytosol	12.24	30.08
Bra035338.1-P	Field mustard	cytosol	12.24	30.08
Bra030922.1-P	Field mustard	cytosol	12.86	29.58
Bra039688.1-P	Field mustard	cytosol	12.76	29.34
Bra002279.1-P	Field mustard	cytosol	12.45	29.12
Bra006529.1-P	Field mustard	cytosol	12.45	29.12
Bra022833.1-P	Field mustard	cytosol	22.04	29.07
Bra040569.1-P	Field mustard	cytosol	12.65	28.64
Bra020378.1-P	Field mustard	cytosol	11.22	27.23
Bra002662.1-P	Field mustard	cytosol	11.22	27.23
Bra010342.1-P	Field mustard	cytosol	12.35	27.19
Bra039431.1-P	Field mustard	cytosol	11.73	27.12
Bra040214.1-P	Field mustard	cytosol	11.73	27.12
Bra001152.1-P	Field mustard	cytosol	11.73	27.12
Bra006775.1-P	Field mustard	cytosol	10.82	27.11
Bra011079.1-P	Field mustard	cytosol	12.24	27.09
Bra000999.1-P	Field mustard	cytosol, mitochondrion	22.96	27.01
Bra024165.1-P	Field mustard	cytosol	8.06	24.46
Bra005733.1-P	Field mustard	cytosol	26.63	23.64
Bra008198.1-P	Field mustard	cytosol	12.04	18.79
Bra009342.1-P	Field mustard	cytosol	20.71	18.11
Bra020079.1-P	Field mustard	cytosol	12.65	17.2
Bra032565.1-P	Field mustard	mitochondrion	20.92	11.0
Bra006530.1-P	Field mustard	cytosol, nucleus, plastid	0.2	0.9

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra007262	EnsemblPlants:Bra007262.1	EnsemblPlants:Bra007262.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0016020	UniProt:M4CSS0	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23077
PANTHER:PTHR23077:SF27	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002542C02	SEG:seg	:

Description

AT3G56690 (E=5e-276) CIP111 | CIP111 (CAM INTERACTING PROTEIN 111); ATPase/ calmodulin binding

Coordinates

chrA09:-:28251464..28256705

Molecular Weight (calculated)

106220.0 Da

IEP (calculated)

5.396

GRAVY (calculated)

-0.242

Length

980 amino acids

Sequence
(BLAST)

001: MPSKKKQPRT PSRLSNSEPP ASPRTPTSST ASQAADYINE EELRRGIVKA SAAFPCLLGK SAIIGRVSDV APESIRGSKI WLSETSMVAA SLIPGSTVSV
101: SLACTESHSF PLSSIKAEYG VECESRIADD DEPGNYFVLA TVLPSSKVLK DGVRISMNLR YGLGCPVAGR TVFVYPVGRP SSLSDRFNVN GGAHENDVND
201: LSLLACKELC LELTPFRNML PPEKLACESS HEQNGNGNST PKTPSNFQKP SSPASSIKGD DSVLSIKQQL SSESLVDLRE VLSNESSKKL LQICAASWLY
301: PCSLLYGNFV AVPILTETCI FCVKRGNKKP SDTSNRNHAF VINRETKVYL HHTLALASVQ DLQFDDDDGE ENGVLIHGPP GTGKTTLARS FARDCGVNFF
401: SVNGAEIIRQ FVGESEKALE EVFRSASNAT PAVVFIDDLD AIAPAREEGG EELSQRMVAT LLNLMDGISR SDGVVVVAAT NRPNSIEPAL RRPGRLDREI
501: EIGVPSSAQR LDILQTILSG MRHSLSDTQL EQLAVGTHGF VGADLAALCC EAAFVCLRKH LDQESSSSNS PLEETPVTAS ECRGSESSTD MADVSSDGSD
601: SASSCLTVSP STSAVRHVSV VADNFENSGN SCSEQMLSKE GEHSLSVGYE DFEKAKIKIR PSAMREVILE VPKVNWEDVG GQKEVKNQLM EAVEWPQKHQ
701: DAFKRIGTRP PSGILMFGPP GCSKTLMARA VASEARLNFL AVKGPELFSK WVGESEKAVR SLFAKARANA PSIIFFDEID SLASIRGKEN DGVSVSDRVM
801: SQLLVELDGL HQRVGVTVIA ATNRPDKIDS ALLRPGRFDR LLYVGPPNEA DREAILKIHL RKIPCSSDIC LKELASVTKG YTGADISLIC REAAIAALEE
901: SLEAEEISMR HLKAAISQVE PTDIQSYKAL SEKFQRLVHT DPQRDNEEAE QQGIINQRPL FPLWTPLKSI VMFLGRQIGS

Best Arabidopsis Sequence Match ( AT3G56690.1 )
(BLAST)

0001: MPSKKKQSRT PSRLSNSEPP ASPRTPASST TSRDTDSINE EELRRSIEEA SAAFPCLLGK SAIIARVADV ASESIRGSKI WLSETSMVAA SLSPGSTVSV
0101: SLASPESRFS RSFPLSSIKA EYGDDSESII ADEPGNYFVL TTVFSSSKVF KDAVRISLNL CYGLGCPVSG RTVFVYPVSG PSLSDQFNGN GRSRYDDVNH
0201: LSLLACKELC LELTPFRNML QAKNAFESSY EQNGNGNSTP KTPANLQKFS SPRPKSPVSP IIEDSVFSCK QRFSSESSID LREVLSNESS KKLLQICASS
0301: WLYPCSLLYG NFVSVPILSE ICIFCVKRAD KRPSDTSNRN HAFMINQETK VYLHHTLDLA SEIQGRTFVQ GLQFDEGENV GCEISKLGGL SKEYAILRDI
0401: IDSSSIKNSL SSLGLRPTKG VLIHGPPGTG KTSLARTFAR HSGVNFFSVN GPEIISQYLG ESEKALDEVF RSASNATPAV VFIDDLDAIA PARKEGGEEL
0501: SQRMVATLLN LMDGISRTDG VVVIAATNRP DSIEPALRRP GRLDREIEIG VPSSTQRSDI LHIILRGMRH SLSNIQVEQL AMATHGFVGA DLSALCCEAA
0601: FVCLRRHLDQ SSSSSNLPLE EAPIAESSSN MSDISSDSSD SASSCITISA TTSGAQRSFS LDETVSLVAD DIQNNGNSCS EQMLRKQGEH TLSVGFEDFE
0701: NAKTKIRPSA MREVILEVPK VNWEDVGGQN EVKNQLMEAV EWPQKHQDAF KRIGTRPPSG ILMFGPPGCS KTLMARAVAS EAKLNFLAVK GPELFSKWVG
0801: ESEKAVRSLF AKARANAPSI IFFDEIDSLA SIRGKENDGV SVSDRVMSQL LVELDGLHQR VGVTVIAATN RPDKIDSALL RPGRFDRLLY VGPPNETDRE
0901: AILKIHLRKI PCSSDICLKE LASITKGYTG ADISLICREA AIAALEESLE MEEISMRHLK AAISQIEPTE ILSYKALSEK FQRLVHTDPQ REEEVTQPGN
1001: KSRSLWTPLR SVAMFLRRHI AS

Arabidopsis Description

CIP111Calmodulin-interacting protein 111 [Source:UniProtKB/Swiss-Prot;Acc:Q9LET7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.