Factsheet for Bra025708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000736.1-P
Bra003597.1-P
Bra006957.1-P
Bra009364.1-P
Bra023876.1-P
Bra025394.1-P
Bra031083.1-P
Bra033666.1-P
Bra035136.1-P
Bra036215.1-P
Bra036720.1-P
Bra038353.1-P
Bra040674.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19050.1	Bra038353.1-P	AT1G68790.1	18642946
AT1G19050.1	Bra003597.1-P	AT1G79690.1	18642946
AT1G19050.1	Bra035136.1-P	AT1G79690.1	18642946
AT1G19050.1	Bra006957.1-P	AT2G19480.1	18642946
AT1G19050.1	Bra031083.1-P	AT2G19480.1	18642946
AT1G19050.1	Bra036720.1-P	AT2G19480.1	18642946
AT1G19050.1	Bra040674.1-P	AT2G19480.1	18642946
AT1G19050.1	Bra023876.1-P	AT3G21510.1	16965536
AT1G19050.1	Bra023876.1-P	AT3G21510.1	18642946
AT1G19050.1	Bra025394.1-P	AT3G29350.1	16965536
AT1G19050.1	Bra036215.1-P	AT3G29350.1	16965536
AT1G19050.1	Bra025394.1-P	AT3G29350.1	18642946
AT1G19050.1	Bra036215.1-P	AT3G29350.1	18642946
AT1G19050.1	Bra025394.1-P	AT3G29350.1	21798944
AT1G19050.1	Bra036215.1-P	AT3G29350.1	21798944
AT1G19050.1	Bra000736.1-P	AT4G11140.1	21705390
AT1G19050.1	Bra009364.1-P	AT5G08720.1	18642946
AT1G19050.1	Bra033666.1-P	AT5G43170.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26701	Canola	nucleus	100.0	100.0
CDY41014	Canola	nucleus	95.77	95.33
Bra016526.1-P	Field mustard	cytosol	82.16	84.54
AT1G19050.1	Thale cress	cytosol	80.28	83.01
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	63.85	73.51
Bra003782.1-P	Field mustard	cytosol	65.73	71.07
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	54.93	65.36
Bra033773.1-P	Field mustard	nucleus	54.46	64.44
Bra010132.1-P	Field mustard	nucleus	52.58	58.95
Solyc03g113720.2.1	Tomato	nucleus	53.52	58.46
PGSC0003DMT400063187	Potato	cytosol	53.52	57.0
KRH57009	Soybean	nucleus	54.93	55.45
KRH03376	Soybean	nucleus	53.52	55.07
KRH63457	Soybean	cytosol	52.58	54.9
Bra019524.1-P	Field mustard	cytosol	34.27	54.48
Bra014695.1-P	Field mustard	cytosol	31.92	53.54
KRH54462	Soybean	cytosol	50.7	52.94
Bra000199.1-P	Field mustard	cytosol	38.97	51.55
Bra027829.1-P	Field mustard	nucleus	49.3	46.46
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	36.62	46.15
VIT_17s0000g07580.t01	Wine grape	cytosol, nucleus, plastid	53.52	44.19
Bra004615.1-P	Field mustard	nucleus	41.78	41.59
Bra019932.1-P	Field mustard	nucleus	49.3	41.5
Bra018439.1-P	Field mustard	nucleus	48.83	41.43
Bra000224.1-P	Field mustard	nucleus	41.78	41.2
Bra036963.1-P	Field mustard	nucleus	49.77	40.61
Bra031714.1-P	Field mustard	nucleus	49.77	40.61
Bra016943.1-P	Field mustard	cytosol	41.31	39.64
Bra007295.1-P	Field mustard	cytosol	42.25	38.14
Bra003265.1-P	Field mustard	cytosol	42.25	37.5
Bra014649.1-P	Field mustard	nucleus	40.38	36.75

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra025708	EnsemblPlants:Bra025708.1	EnsemblPlants:Bra025708.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4EAA0	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF17	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000253F529
SEG:seg	:	:	:	:	:

Description

AT1G19050 (E=2e-089) ARR7 | ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator

Coordinates

chrA06:-:7405386..7406551

Molecular Weight (calculated)

23482.3 Da

IEP (calculated)

5.445

GRAVY (calculated)

-0.280

Length

213 amino acids

Sequence
(BLAST)

001: MAVGEVMRME IPAGGDMSVT SPELHVLAVD DSIVDRKVIE RLLRISACKV TTVESGARAL QYLGLDGDKG ASGLKDLKVN LIVTDYSMPG LTGYDLLKKI
101: KESSVFREIP VVIMSSENIL PRIEQCLREG AEDFLLKPVK LADVKRIKEL IMRNEAEDCK TLSHSNKRKF AEYIDDASSP SPSSSSTHDE SAAKDFPSSK
201: RMKSEDDKFS SLL

Best Arabidopsis Sequence Match ( AT1G19050.1 )
(BLAST)

001: MAVGEVMRME IPAGGDLTVT TPELHVLAVD DSIVDRKVIE RLLRISSCKV TTVESGTRAL QYLGLDGGKG ASNLKDLKVN LIVTDYSMPG LSGYDLLKKI
101: KESSAFREVP VVIMSSENIL PRIQECLKEG AEEFLLKPVK LADVKRIKQL IMRNEAEECK ILSHSNKRKL QEDSDTSSSS HDDTSIKDSS CSKRMKSESE
201: NLFSLL

Arabidopsis Description

ARR7At1g19050 [Source:UniProtKB/TrEMBL;Acc:Q2HIJ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.